Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS304E03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    26   0.23 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.6  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   6.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 288 YAYYKTIPHKCHFNLET 238
           Y  Y  +PH+CH NL++
Sbjct: 339 YTMYFRMPHRCHGNLQS 355


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 288 YAYYKTIPHKCHFN 247
           Y  Y  +PHKC+ N
Sbjct: 331 YTLYFRMPHKCNGN 344


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 288 YAYYKTIPHKCHFN 247
           Y  Y  +PHKC+ N
Sbjct: 338 YTLYFRMPHKCNGN 351


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 276 KTIPHKCHFNLETRLSGEF*HRFV 205
           + +P KC FN +    G   H F+
Sbjct: 743 RNVPQKCIFNGQAYFPGSRFHPFL 766


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 506 SIQFYFNAELLDISF 462
           +++ YFN +L+ +SF
Sbjct: 126 NVKIYFNHKLMSVSF 140


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 506 SIQFYFNAELLDISF 462
           +++ YFN +L+ +SF
Sbjct: 126 NVKIYFNHKLMSVSF 140


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -1

Query: 506 SIQFYFNAELLDISF 462
           +++ YFN +L+ +SF
Sbjct: 126 NVKIYFNHKLMSVSF 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,325
Number of Sequences: 336
Number of extensions: 2688
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)