Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0640
         (393 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   0.47 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   4.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.4  

>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.2 bits (50), Expect = 0.47
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 276 TDFCPDLLMRNNTCFIYKHSLQFENKMFSY 365
           T +   L+  NN+ F+ ++S +F+N   SY
Sbjct: 357 TTYLVILIQFNNSDFVQRNSTEFDNATESY 386


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 176 SDLTPEQVQLDFRVDF 129
           +DLTPEQ+Q     DF
Sbjct: 222 TDLTPEQIQAAEVKDF 237


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/35 (22%), Positives = 14/35 (40%)
 Frame = +1

Query: 25  EESPCPTCAFAXXXXXXXXXTDTPSGTSNLSCLLE 129
           + +PC                D PSGT+  +C ++
Sbjct: 381 DSNPCQNGGVCRISDGGGYICDCPSGTNGTNCEID 415


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,117
Number of Sequences: 336
Number of extensions: 1368
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8330471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)