BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= maV30730 (739 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At3g45330.1 68416.m04894 lectin protein kinase family protein co... 35 0.065 At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transfera... 34 0.11 At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.26 At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 31 1.1 At3g55230.1 68416.m06134 disease resistance-responsive family pr... 30 1.4 At1g61080.1 68414.m06877 proline-rich family protein 30 1.4 At2g17550.1 68415.m02031 expressed protein 29 2.4 At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 29 3.2 At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 29 3.2 At3g51290.1 68416.m05614 proline-rich family protein 29 4.3 At5g66640.1 68418.m08399 LIM domain-containing protein-related c... 28 5.6 At5g28020.2 68418.m03375 cysteine synthase, putative / O-acetyls... 28 5.6 At5g28020.1 68418.m03374 cysteine synthase, putative / O-acetyls... 28 5.6 At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 28 5.6 At2g19860.1 68415.m02322 hexokinase 2 (HXK2) identical to hexoki... 28 5.6 At5g37600.1 68418.m04529 glutamine synthetase, putative similar ... 28 7.4 At3g12200.1 68416.m01521 protein kinase family protein contains ... 28 7.4 At2g39430.1 68415.m04840 disease resistance-responsive protein-r... 28 7.4 At5g24350.1 68418.m02870 expressed protein weak similarity to ne... 27 9.8 At5g05390.1 68418.m00581 laccase, putative / diphenol oxidase, p... 27 9.8 At4g23300.1 68417.m03358 protein kinase family protein contains ... 27 9.8 At4g00560.3 68417.m00079 methionine adenosyltransferase regulato... 27 9.8 At4g00560.2 68417.m00078 methionine adenosyltransferase regulato... 27 9.8 At4g00560.1 68417.m00077 methionine adenosyltransferase regulato... 27 9.8 At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putat... 27 9.8 At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putat... 27 9.8 At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 9.8 >At3g45330.1 68416.m04894 lectin protein kinase family protein contains Serine/Threonine protein kinases active-site signature, Prosite:PS00108; contains Pfam profiles PF00069: Protein kinase domain, PF00139: Legume lectins beta domain, PF00138: Legume lectins alpha domain Length = 682 Score = 34.7 bits (76), Expect = 0.065 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%) Frame = +2 Query: 194 KHQRWPKPPELSP---IYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDT 358 +HQR P+ +P + PV +P +TS ++T + SGP SP+S N S+ S T Sbjct: 618 RHQRLPEFSPNTPGIGVSTPVLMGLPSLAITSSSVTSSVSGPSASPSSANNSMFISHT 675 >At2g16890.2 68415.m01944 UDP-glucoronosyl/UDP-glucosyl transferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Length = 478 Score = 33.9 bits (74), Expect = 0.11 Identities = 17/51 (33%), Positives = 31/51 (60%) Frame = -2 Query: 435 QGWSDRVSELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRV 283 +G++DR+ E + + +D+ ++LSH S +G LS G S +++CV V Sbjct: 326 EGFNDRIRESGMIVRDWVDQWEILSHESVKGF--LSHCGWNSAQESICVGV 374 >At3g19020.1 68416.m02415 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 956 Score = 32.7 bits (71), Expect = 0.26 Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 1/88 (1%) Frame = +2 Query: 209 PKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSI 385 P PP SP P PV P+ P TS + T S E+ S + P+ D+ D Sbjct: 811 PPPPVFSP---PPKPVTPLPPATSPMANAPTPSSSESGEISTPVQAPTPDSEDIEAPSDS 867 Query: 386 NSSLTLVNSDTLSDQPWVVPEVEESMTS 469 N S +S S P PEVE + S Sbjct: 868 NHSPVFKSSPAPS--PDSEPEVEAPVPS 893 >At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor family protein low similarity to extensin [Volvox carteri] GI:21992 Length = 312 Score = 30.7 bits (66), Expect = 1.1 Identities = 23/75 (30%), Positives = 38/75 (50%) Frame = +2 Query: 104 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 283 ++S++P+ +SPS + + P+ A P P LSP P P PL+SL Sbjct: 24 SSSLSPSSSSPSLSPSPP-SSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSS-SPLSSL 81 Query: 284 TLTQTASGPETSPAS 328 + + + S P +SP+S Sbjct: 82 SPSLSPSPPSSSPSS 96 >At3g55230.1 68416.m06134 disease resistance-responsive family protein low similarity to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669 Length = 306 Score = 30.3 bits (65), Expect = 1.4 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +1 Query: 550 NSRNSQSNNIAAYITAHLLPPVAQVFHQSAGSITDLLRGVGNGND-ATGLVANAQRY 717 NS+ S S+N ++T LPP+A + GSIT + + G++ + ++ AQ + Sbjct: 154 NSQGSLSSNNLPFVTTGQLPPIAALQQLMFGSITVVDDELTEGHELGSAIIGRAQGF 210 >At1g61080.1 68414.m06877 proline-rich family protein Length = 907 Score = 30.3 bits (65), Expect = 1.4 Identities = 16/51 (31%), Positives = 19/51 (37%) Frame = +2 Query: 170 PARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSP 322 P A M +KH P PP L P +P+ P P S P P Sbjct: 462 PPPAVMPLKHFAPPPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPP 512 >At2g17550.1 68415.m02031 expressed protein Length = 765 Score = 29.5 bits (63), Expect = 2.4 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -2 Query: 414 SELTRVSDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVR 286 +EL R +EL ++QV + V EE + + ++ PD V VR Sbjct: 546 NELRRQINELESEVQVRTPVEEEPIQEIETIVDLGNPDKVFVR 588 >At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain Length = 1055 Score = 29.1 bits (62), Expect = 3.2 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = +2 Query: 209 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 349 P PP P+ P+ P P+ S T TAS + ++ L P+ Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805 >At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain Length = 1055 Score = 29.1 bits (62), Expect = 3.2 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = +2 Query: 209 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPS 349 P PP P+ P+ P P+ S T TAS + ++ L P+ Sbjct: 759 PAPPMSRPLSAPIIPPTQAAPVISAVQTSTASLARSMSSTGRLGSPT 805 >At3g51290.1 68416.m05614 proline-rich family protein Length = 602 Score = 28.7 bits (61), Expect = 4.3 Identities = 18/52 (34%), Positives = 21/52 (40%) Frame = +2 Query: 209 PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWD 364 P PP P P P+ P T+ T T T+S P P S TWD Sbjct: 74 PPPPPPRP---PPPPLSPGSETTTWTTTTTSSVLPPPPPPPPPPPPPSSTWD 122 >At5g66640.1 68418.m08399 LIM domain-containing protein-related contains low similarity to Pfam profile PF00412: LIM domain Length = 450 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Frame = -1 Query: 133 RCFC--RCHRRSPMHVRLRN*LFHHQCRVEFH 44 RC C CHR MH L+ FH C E++ Sbjct: 95 RCLCCFHCHRPFVMHEILKKGKFHIDCYKEYY 126 >At5g28020.2 68418.m03375 cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to O-acetylserine(thiol) lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme Length = 323 Score = 28.3 bits (60), Expect = 5.6 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 619 QVFHQSAGSITDLLRGVGNGNDATGL 696 +++ SAG + L+ GVG G ATG+ Sbjct: 166 EIWRDSAGKVDILVAGVGTGGTATGV 191 >At5g28020.1 68418.m03374 cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative similar to O-acetylserine(thiol) lyase (EC 4.2.99.8) [Brassica juncea] GI:2245144; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme Length = 323 Score = 28.3 bits (60), Expect = 5.6 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +1 Query: 619 QVFHQSAGSITDLLRGVGNGNDATGL 696 +++ SAG + L+ GVG G ATG+ Sbjct: 166 EIWRDSAGKVDILVAGVGTGGTATGV 191 >At5g14920.1 68418.m01750 gibberellin-regulated family protein similar to SP|P46689 Gibberellin-regulated protein 1 precursor {Arabidopsis thaliana}; contains Pfam profile PF02704: Gibberellin regulated protein Length = 275 Score = 28.3 bits (60), Expect = 5.6 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Frame = +2 Query: 215 PPELSPIYLPVSP-VMP--VQPLTSLTLTQTASGPETSPASDNLSVP 346 PP P Y P +P V P VQP T T T P TSP + P Sbjct: 100 PPVQPPTYKPPTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPP 146 >At2g19860.1 68415.m02322 hexokinase 2 (HXK2) identical to hexokinase 2 [Arabidopsis thaliana] Swiss-Prot:P93834 Length = 502 Score = 28.3 bits (60), Expect = 5.6 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +1 Query: 145 VQEILKDMASQGDYASQASAVAQTA-GIIAHLSAGIPGDACAAANVINSYTDGVRSGNFA 321 V EILK A + D A+ + + Q A + + AG+ + + ++ SY D + SG+ Sbjct: 37 VIEILK--AFEEDCATPIAKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPSGDET 94 Query: 322 GFRQSL 339 GF +L Sbjct: 95 GFFYAL 100 >At5g37600.1 68418.m04529 glutamine synthetase, putative similar to glutamine synthetase, cytosolic isozyme (Glutamate-- ammonia ligase, GS1) [Lotus japonicus] SWISS-PROT:Q42899 Length = 356 Score = 27.9 bits (59), Expect = 7.4 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +1 Query: 355 HVGQNLNLINQLVTNPGQLRYSVGPALGCAGGGRIY 462 + G N++ IN V PGQ + VGPA+G + I+ Sbjct: 181 YAGINISGINGEVM-PGQWEFQVGPAVGISAADEIW 215 >At3g12200.1 68416.m01521 protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290 Length = 571 Score = 27.9 bits (59), Expect = 7.4 Identities = 11/14 (78%), Positives = 12/14 (85%) Frame = +2 Query: 224 LSPIYLPVSPVMPV 265 LSPIYLPV P+ PV Sbjct: 283 LSPIYLPVFPIKPV 296 >At2g39430.1 68415.m04840 disease resistance-responsive protein-related / dirigent protein-related contains similarity to disease resistance response protein 206-d [Pisum sativum] gi|508844|gb|AAB18669; contains similarity to dirigent protein [Thuja plicata] gi|6694709|gb|AAF25365 Length = 322 Score = 27.9 bits (59), Expect = 7.4 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 550 NSRNSQSNNIAAYITAHLLPPVAQVFHQSAGSIT 651 NS ++ S N ++TA LPP A + H G+IT Sbjct: 171 NSNDALSANSLPFVTAGNLPPGAALQHLMFGTIT 204 >At5g24350.1 68418.m02870 expressed protein weak similarity to neuroblastoma-amplified protein [Homo sapiens] GI:4337460 Length = 2376 Score = 27.5 bits (58), Expect = 9.8 Identities = 17/71 (23%), Positives = 33/71 (46%) Frame = +2 Query: 263 VQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVV 442 ++PL ++ + + P + +P S TW + IL IN + L +D + + Sbjct: 1726 LEPLQAVEILKRHFTLVLPPNGSYMHIPDSSTWQECLILLINFWIRL--ADEMQEVKSSN 1783 Query: 443 PEVEESMTSKP 475 P + E++T P Sbjct: 1784 PSLVENLTLSP 1794 >At5g05390.1 68418.m00581 laccase, putative / diphenol oxidase, putative similar to laccase [Populus balsamifera subsp. trichocarpa][GI:3805960] Length = 565 Score = 27.5 bits (58), Expect = 9.8 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -3 Query: 692 PVASLPLPTPLRRSVIDPADWWN 624 P +S P P P R++ + +WWN Sbjct: 147 PGSSFPFPKPDRQTALMLGEWWN 169 >At4g23300.1 68417.m03358 protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain Length = 660 Score = 27.5 bits (58), Expect = 9.8 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = -2 Query: 198 CLTCIVALAGHVLQDLLNVEDGDAFVGVIDVVPCT*DYGT-SFSIINVAW 52 C CI AG ++QD +N DA+ +D C Y SFS W Sbjct: 88 CFNCIKGAAGWLIQDCVN--QTDAYYWALDPTLCLVRYSNISFSGSAAFW 135 >At4g00560.3 68417.m00079 methionine adenosyltransferase regulatory beta subunit-related contains weak similarity to methionine adenosyltransferase regulatory beta subunit (GI:6815285) [Homo sapiens] Length = 253 Score = 27.5 bits (58), Expect = 9.8 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = +2 Query: 197 HQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSSDTWDK 367 H P P L + P SP PV + L +++Q P+ LSVP + D Sbjct: 41 HHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDP 99 Query: 368 T*ILSINSSLTLVN 409 +SIN +LVN Sbjct: 100 DSAMSINVPTSLVN 113 >At4g00560.2 68417.m00078 methionine adenosyltransferase regulatory beta subunit-related contains weak similarity to methionine adenosyltransferase regulatory beta subunit (GI:6815285) [Homo sapiens] Length = 201 Score = 27.5 bits (58), Expect = 9.8 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = +2 Query: 197 HQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSSDTWDK 367 H P P L + P SP PV + L +++Q P+ LSVP + D Sbjct: 41 HHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDP 99 Query: 368 T*ILSINSSLTLVN 409 +SIN +LVN Sbjct: 100 DSAMSINVPTSLVN 113 >At4g00560.1 68417.m00077 methionine adenosyltransferase regulatory beta subunit-related contains weak similarity to methionine adenosyltransferase regulatory beta subunit (GI:6815285) [Homo sapiens] Length = 327 Score = 27.5 bits (58), Expect = 9.8 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = +2 Query: 197 HQRWPKPPELSPIYLPVSPVMPVQPLTSL---TLTQTASGPETSPASDNLSVPSSDTWDK 367 H P P L + P SP PV + L +++Q P+ LSVP + D Sbjct: 41 HHSSPLPARLLDAF-PHSPAFPVDLKSGLGLNSISQDFRQPDVVVNCAALSVPRACEQDP 99 Query: 368 T*ILSINSSLTLVN 409 +SIN +LVN Sbjct: 100 DSAMSINVPTSLVN 113 >At3g23530.1 68416.m02961 cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative similar to cyclopropane synthase [Sterculia foetida] GI:21069167; contains Pfam profiles PF02353: Cyclopropane-fatty-acyl-phospholipid synthase, PF01593: amine oxidase, flavin-containing Length = 867 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = +1 Query: 34 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 183 YSD + DID + AW+++ T+K + + IL+++ + Sbjct: 297 YSDIYLHHDIDLMPRNQAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346 >At3g23510.1 68416.m02960 cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative similar to cyclopropane synthase [Sterculia foetida] GI:21069167; contains Pfam profile PF02353: Cyclopropane-fatty-acyl-phospholipid synthase Length = 867 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/50 (24%), Positives = 24/50 (48%) Frame = +1 Query: 34 YSDNEIPRDIDDGKASSVISRAWDYVDDTDKSIAILNVQEILKDMASQGD 183 YSD + DID + AW+++ T+K + + IL+++ + Sbjct: 297 YSDIYLHHDIDLMPRNKAAWSAWNFLGSTEKKVCVTYWLNILQNLGENSE 346 >At1g79280.1 68414.m09242 expressed protein weak similarity to Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens] Length = 2111 Score = 27.5 bits (58), Expect = 9.8 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -2 Query: 417 VSELTRVSDELIDKIQVLSHVSEEGTERLSEA-GEVSGPDAVCVRVN 280 +SE +DKI L+ S E RL+EA E++ A+C R++ Sbjct: 138 ISEKNSTIKSYLDKIVKLTDTSSEKEARLAEATAELARSQAMCSRLS 184 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.316 0.131 0.380 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,310,816 Number of Sequences: 28952 Number of extensions: 312461 Number of successful extensions: 1322 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1239 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1318 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1624036432 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits)
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