Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30719
         (730 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q19015 Cluster: Putative uncharacterized protein pgp-11...    34   4.1  
UniRef50_Q7RN98 Cluster: Putative uncharacterized protein PY0192...    33   7.2  
UniRef50_Q04956 Cluster: Probable cation-transporting ATPase 1; ...    33   7.2  
UniRef50_Q4UIT9 Cluster: Putative uncharacterized protein; n=2; ...    33   9.5  

>UniRef50_Q19015 Cluster: Putative uncharacterized protein pgp-11;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein pgp-11 - Caenorhabditis elegans
          Length = 1270

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = -1

Query: 283 TQLQKLHFTTSKSKVHYL*KTESGHLKHLRFKKKS 179
           T L+KLHF  +  ++HYL + ES  L  + F KKS
Sbjct: 36  TLLRKLHFFITYKQIHYLKRLESEDLDLINFAKKS 70


>UniRef50_Q7RN98 Cluster: Putative uncharacterized protein PY01922;
           n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01922 - Plasmodium yoelii yoelii
          Length = 1614

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = -1

Query: 184 KSTDQRQSSFTNILLNCCFCKKKQGN*KLKYVAILTNQNFYFENRI--NMQKIFL 26
           KS  ++++   NILLN     K   N K KY  I   +N YF N I  N+ KIF+
Sbjct: 608 KSNQKQKNIGQNILLNMKNVNKHITNVKYKYTNINLQKNNYFLNHISDNLLKIFI 662


>UniRef50_Q04956 Cluster: Probable cation-transporting ATPase 1; n=3;
            Plasmodium|Rep: Probable cation-transporting ATPase 1 -
            Plasmodium falciparum
          Length = 1956

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
 Frame = -2

Query: 399  AQSN*LYN*LILRNCAKNIFRQN--YEKNQQFSVKQYCKVAHNC-KNYILRPPNRKCIIY 229
            A SN + +  I++N   N++ +N  Y KN  ++    C   + C KNYI    N    IY
Sbjct: 1495 AFSNLILSFYIIKNDDNNVYNKNYIYNKNYIYNKNSICNKNYICNKNYIYNKNN----IY 1550

Query: 228  RKRN-PDI*NILGLKKKVQTSG-RVPLQTYYSIVVFARRNKVTKN 100
             K N  +  NIL   K V  SG       ++S ++   + K  KN
Sbjct: 1551 NKNNIYNKKNILTHAKSVLLSGSSKKFLKFFSNIIRRHKLKEKKN 1595


>UniRef50_Q4UIT9 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria annulata
          Length = 535

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 18/72 (25%), Positives = 37/72 (51%)
 Frame = -3

Query: 332 IMKKINNFL*SSIVRSHTIAKITFYDLQIESALSIENGIRTFKTS*V*KKKYRPAAEFLY 153
           +MK ++N+  + +     + KIT YDL+I++ LS     +TF  +     K++   + L 
Sbjct: 35  VMKVLSNYKSTKVKNVFVLEKITKYDLEIQNGLSPSQIYKTFPLAYNTHLKHKKIMKSLI 94

Query: 152 KHITQLLFLQEE 117
            H+  +  L+ +
Sbjct: 95  YHLKNVYNLETQ 106


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,586,802
Number of Sequences: 1657284
Number of extensions: 12271874
Number of successful extensions: 25136
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25131
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)