Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30719
         (730 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical ...    30   1.8  
At5g49150.1 68418.m06083 hypothetical protein                          28   5.5  

>At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical to
            MAP3K epsilon protein kinase [Arabidopsis thaliana]
            gi|3549652|emb|CAA12272
          Length = 1368

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
 Frame = +3

Query: 300  ASQKIVDFFHNFAEKYFWH---NFSKLV--NYRVNLIVLPTNLIDPL 425
            A QK+VDFF +  E++F H    F K++  +YR+N   L  N + PL
Sbjct: 1244 AIQKLVDFFQSCPERHFVHILEPFLKIITKSYRINK-TLAVNGLTPL 1289


>At5g49150.1 68418.m06083 hypothetical protein
          Length = 896

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 220 PFSIDNALSIWRS*NVIFAIVCDLTILLHRK 312
           P  + N +SIW+S    + I   + ILLH+K
Sbjct: 113 PLDVSNCVSIWKSELSTWQIFSKMEILLHQK 143


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,141,412
Number of Sequences: 28952
Number of extensions: 270753
Number of successful extensions: 499
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)