Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30706
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    29   0.082
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   7.1  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   7.1  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    23   9.4  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   9.4  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 29.5 bits (63), Expect = 0.082
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
 Frame = +2

Query: 149 REKALSHSLFYLKLGAGMTPDVAREPQSPTARRPSGSAVARAPPTTRFQ-RHAQPRVS 319
           R++ + +SL   K+G G      R+P +P  RR S     +     R Q    QPR S
Sbjct: 179 RDRDVLNSLLAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQQQRNQHEQEQPRAS 236


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 541 RRHGLRWRGNIAWMRVPPKP 482
           R+  LRW   +  M VPP+P
Sbjct: 351 RKTRLRWMMEMPGMSVPPQP 370


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 282 QPASNDTRNHVSPSSCVASNP 344
           QP ++D  NH + S+    NP
Sbjct: 438 QPPTSDAPNHTTTSTTTEGNP 458


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 327 KSSETRGCACRWKRVVGGARATA 259
           KSS   G A R+ + +GG+R  A
Sbjct: 169 KSSRGLGKAYRYSQTIGGSRRAA 191


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 491 RHSHPRDITPPPEAMSPR 544
           RHS   D TP P  + PR
Sbjct: 48  RHSFETDGTPAPSTVRPR 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,570
Number of Sequences: 2352
Number of extensions: 9696
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)