Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30700
         (689 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4C451 Cluster: ABC-type amino acid transport/signal tr...    37   0.40 
UniRef50_Q01Z57 Cluster: Putative uncharacterized protein precur...    37   0.53 
UniRef50_Q74C50 Cluster: CDP-diacylglycerol--glycerol-3-phosphat...    33   8.7  
UniRef50_Q8MTQ0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.7  

>UniRef50_A4C451 Cluster: ABC-type amino acid transport/signal
           transduction systems, periplasmic component/domain; n=1;
           Pseudoalteromonas tunicata D2|Rep: ABC-type amino acid
           transport/signal transduction systems, periplasmic
           component/domain - Pseudoalteromonas tunicata D2
          Length = 241

 Score = 37.1 bits (82), Expect = 0.40
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 412 NENCLIFSGLKTTSRTRPLRWAFKINIIIYCHY 510
           +EN LIF+ +KT  R     W +KI+ I YC+Y
Sbjct: 81  DENVLIFTLVKTVERANNFHWLYKIDSIGYCYY 113


>UniRef50_Q01Z57 Cluster: Putative uncharacterized protein
           precursor; n=1; Solibacter usitatus Ellin6076|Rep:
           Putative uncharacterized protein precursor - Solibacter
           usitatus (strain Ellin6076)
          Length = 285

 Score = 36.7 bits (81), Expect = 0.53
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +3

Query: 576 DTKFQVNRIHGY*YVHSYNGSSVKITVDLYISID 677
           D K  V+ +HGY +V  Y+G+ +++TVD +I  D
Sbjct: 43  DRKLLVDNVHGYVHVTGYSGTQIQVTVDKHILAD 76


>UniRef50_Q74C50 Cluster: CDP-diacylglycerol--glycerol-3-phosphate
           3-phosphatidyltransferase; n=8; Desulfuromonadales|Rep:
           CDP-diacylglycerol--glycerol-3-phosphate
           3-phosphatidyltransferase - Geobacter sulfurreducens
          Length = 197

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = +1

Query: 505 HYYYGVQHSYKY*PIHEVHVFSTWILS----FKSIGYMVISTYIV 627
           H+++G+ H Y Y  +H V +F  WI +    +  + Y+V  T ++
Sbjct: 151 HWFFGIDHPYLYVNMHNVGMFYLWIATIITIWSGVDYLVKFTKVI 195


>UniRef50_Q8MTQ0 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 44

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = -1

Query: 497 IIMLILNAQRSGRVRLVVF 441
           II+LILNAQRSGRV+LV +
Sbjct: 10  IIILILNAQRSGRVQLVYY 28


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,131,167
Number of Sequences: 1657284
Number of extensions: 11480283
Number of successful extensions: 18716
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18711
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)