Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30691
         (681 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VNE7 Cluster: CG14672-PA, isoform A; n=3; Endopterygo...    83   6e-15
UniRef50_UPI00015B4223 Cluster: PREDICTED: similar to CDC42 smal...    83   8e-15
UniRef50_Q7PTP8 Cluster: ENSANGP00000012946; n=4; Endopterygota|...    82   1e-14
UniRef50_Q9NRR3 Cluster: CDC42 small effector 2; n=22; Eumetazoa...    57   5e-07
UniRef50_Q9NRR8 Cluster: CDC42 small effector 1; n=13; Euteleost...    41   0.032
UniRef50_UPI0000500DD6 Cluster: UPI0000500DD6 related cluster; n...    38   0.30 
UniRef50_A0D1E5 Cluster: Chromosome undetermined scaffold_34, wh...    34   2.8  
UniRef50_Q70KA9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_Q4N1R1 Cluster: Putative uncharacterized protein; n=2; ...    33   4.9  
UniRef50_A1G7D7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_UPI0001554DCF Cluster: PREDICTED: similar to vomeronasa...    33   8.5  
UniRef50_Q8IIH3 Cluster: Putative uncharacterized protein; n=4; ...    33   8.5  

>UniRef50_Q9VNE7 Cluster: CG14672-PA, isoform A; n=3;
           Endopterygota|Rep: CG14672-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 85

 Score = 83.0 bits (196), Expect = 6e-15
 Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
 Frame = +1

Query: 475 MASTGGEIWLQWFACCYXXXXXXXXXXXX---IDRSMIGAPTNFQHTGHIGSTDVDIPAS 645
           MASTG EIWLQWF+CC+               IDRSMIG PTNF HTGHIGS DV++ A+
Sbjct: 1   MASTG-EIWLQWFSCCFQQQRSPSRRPHQRLRIDRSMIGNPTNFVHTGHIGSADVELSAN 59

Query: 646 LLHSMQNQMQSK 681
            L+++  QMQSK
Sbjct: 60  RLNAISTQMQSK 71


>UniRef50_UPI00015B4223 Cluster: PREDICTED: similar to CDC42 small
           effector 2-like protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to CDC42 small effector 2-like
           protein - Nasonia vitripennis
          Length = 88

 Score = 82.6 bits (195), Expect = 8e-15
 Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
 Frame = +1

Query: 475 MASTGGEIWLQWFACCYXXXXXXXXXXXX--------IDRSMIGAPTNFQHTGHIGSTDV 630
           MASTG E+W+QWF CC                     IDRSMIGAPTNFQHTGHIG+ D+
Sbjct: 1   MASTG-EVWVQWFTCCLTQQRPGARAKRQRPQQQRLRIDRSMIGAPTNFQHTGHIGTGDL 59

Query: 631 DIPASLLHSMQNQMQSK 681
           D+ ++ LH++QNQMQ K
Sbjct: 60  DMASAHLHAIQNQMQGK 76


>UniRef50_Q7PTP8 Cluster: ENSANGP00000012946; n=4;
           Endopterygota|Rep: ENSANGP00000012946 - Anopheles
           gambiae str. PEST
          Length = 85

 Score = 81.8 bits (193), Expect = 1e-14
 Identities = 41/73 (56%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
 Frame = +1

Query: 475 MASTGGEIWLQWFACCYXXXXXXXXXXXX----IDRSMIGAPTNFQHTGHIGSTDVDIPA 642
           MASTG +IWLQWF+CC+                IDRSMIG PTNF HTGHIGS DV++  
Sbjct: 1   MASTG-DIWLQWFSCCFHQPQSPRRRRHHQRLRIDRSMIGNPTNFVHTGHIGSNDVELTT 59

Query: 643 SLLHSMQNQMQSK 681
           + L  +QNQMQSK
Sbjct: 60  NHLSVLQNQMQSK 72


>UniRef50_Q9NRR3 Cluster: CDC42 small effector 2; n=22;
           Eumetazoa|Rep: CDC42 small effector 2 - Homo sapiens
           (Human)
          Length = 84

 Score = 56.8 bits (131), Expect = 5e-07
 Identities = 31/63 (49%), Positives = 36/63 (57%)
 Frame = +1

Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDVDIPASLLHSMQNQM 672
           E WL  F CC             IDRSMIG PTNF HT H+GS D+    + + S+QNQM
Sbjct: 3   EFWL-CFNCCIAEQPQPKRRRR-IDRSMIGEPTNFVHTAHVGSGDLFSGMNSVSSIQNQM 60

Query: 673 QSK 681
           QSK
Sbjct: 61  QSK 63


>UniRef50_Q9NRR8 Cluster: CDC42 small effector 1; n=13;
           Euteleostomi|Rep: CDC42 small effector 1 - Homo sapiens
           (Human)
          Length = 79

 Score = 40.7 bits (91), Expect = 0.032
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +1

Query: 493 EIWLQWFACCYXXXXXXXXXXXXIDRSMIGAPTNFQHTGHIGSTDVDI--PASLLHSMQN 666
           E W +   CC             IDR+MIG P NF H  HIGS ++      ++  ++Q 
Sbjct: 3   EFWHK-LGCCVVEKPQPKKKRRRIDRTMIGEPMNFVHLTHIGSGEMGAGDGLAMTGAVQE 61

Query: 667 QMQSK 681
           QM+SK
Sbjct: 62  QMRSK 66


>UniRef50_UPI0000500DD6 Cluster: UPI0000500DD6 related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000500DD6 UniRef100 entry -
           Rattus norvegicus
          Length = 79

 Score = 37.5 bits (83), Expect = 0.30
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = +1

Query: 574 MIGAPTNFQHTGHIGSTDVDIPASLLHSMQNQMQSK 681
           M+   TNF H  HIGS D+    + + S+QNQMQSK
Sbjct: 23  MVEELTNFVHIAHIGSGDLFSGTNSVSSIQNQMQSK 58


>UniRef50_A0D1E5 Cluster: Chromosome undetermined scaffold_34, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_34, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1229

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
 Frame = -3

Query: 517  TRTTEAKFHRRYS--PFCLLTSVLSVHLHTGYKIRKTFPRNGRGANLNIFKSNFEVLVRN 344
            T+    KF  +YS  PF LL S++  HLH  + I + + +N R    + F +  E L R 
Sbjct: 814  TKKKSVKFQPKYSIAPFLLLNSIIQQHLHRNFNILQ-YNQN-RKRRHSSFNNVLEQLYRR 871

Query: 343  SEALGMRTIYRSNVIDRRSRYALNFIL 263
             +    R I +S ++  ++   ++F++
Sbjct: 872  KQTQNFR-ILKSRLLLSKTFRRISFMI 897


>UniRef50_Q70KA9 Cluster: Putative uncharacterized protein; n=1;
           Gordonia westfalica|Rep: Putative uncharacterized
           protein - Gordonia westfalica
          Length = 237

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +3

Query: 555 TENRQVHDRRAHELSTHGPHRVNGCRHSGVASPLYAEPDAE 677
           T   Q H RRA +  T    R+N  RH+G   P Y +  AE
Sbjct: 39  TVRNQQHKRRARQ--TRAQQRLNSARHTGARQPRYTDTSAE 77


>UniRef50_Q4N1R1 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 394

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = -3

Query: 496 FHRRYSPFCLLTSVLSVHLHTGYKIRKTFPRNGRGANLNIFKSNFEVLVRNSEAL 332
           F R Y+ F +L ++L ++ + GY   K +        L + + NFE + R+  AL
Sbjct: 97  FRRNYAYFLVLVALLGLYAYYGYDRNKKWAEQLCNTALPVLEENFEYIERDQTAL 151


>UniRef50_A1G7D7 Cluster: Putative uncharacterized protein; n=1;
           Salinispora arenicola CNS205|Rep: Putative
           uncharacterized protein - Salinispora arenicola CNS205
          Length = 730

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 552 PTENRQVHDRRAHELSTHGPHRVNGCRHSGVASPLYAEPD 671
           P E  +VH RR    S+H  HRV GC    V  P +  P+
Sbjct: 163 PVEPAKVHTRRYGGGSSHRAHRVGGCVAPPVVEPAHRLPE 202


>UniRef50_UPI0001554DCF Cluster: PREDICTED: similar to vomeronasal
           V1r-type receptor V1rf3; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to vomeronasal V1r-type
           receptor V1rf3 - Ornithorhynchus anatinus
          Length = 414

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -3

Query: 571 TCLFSVGFVAPEPRVGSST-RTTEAKFHRRYSPFCLLTSVLSVHLHTGYKIRKTFPRNGR 395
           TCL SV F A     G+S     +AK H    P C L+ VLS+ +     I+ T P N  
Sbjct: 67  TCLLSV-FQAVTLSPGTSRWARVKAKLHESVVPSCALSWVLSLLVECNVAIQMTGPLNNS 125

Query: 394 GANL 383
            A++
Sbjct: 126 SAHI 129


>UniRef50_Q8IIH3 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2147

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
 Frame = -3

Query: 172 DNRFFEHLI---LVNKEHTL*VFATQFICKNTVMI--NTSNCFYTVNNSNTCLNLYTTVL 8
           +N+F + L+   + N+   L VF T    ++++ +  N  N    V+NSN   N+YT+VL
Sbjct: 433 NNKFIDELVKRKITNENKKLNVFLTSRCTRSSIEMTNNNKNNMSDVDNSNRSSNVYTSVL 492

Query: 7   SQ 2
           ++
Sbjct: 493 NK 494


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,932,559
Number of Sequences: 1657284
Number of extensions: 12389468
Number of successful extensions: 28517
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 27563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28511
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)