Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30690
         (318 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.33 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.33 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.33 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.33 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    20   5.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       19   9.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    19   9.5  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    19   9.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 167 SFNLCFFSLSAKPTTTSCCNAFFTAAL 87
           S  +CFF  S KP  +     FFT  L
Sbjct: 150 SSRMCFFKSSKKPAFSHFLIVFFTETL 176


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 167 SFNLCFFSLSAKPTTTSCCNAFFTAAL 87
           S  +CFF  S KP  +     FFT  L
Sbjct: 150 SSRMCFFKSSKKPAFSHFLIVFFTETL 176


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 167 SFNLCFFSLSAKPTTTSCCNAFFTAAL 87
           S  +CFF  S KP  +     FFT  L
Sbjct: 150 SSRMCFFKSSKKPAFSHFLIVFFTETL 176


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.33
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 167 SFNLCFFSLSAKPTTTSCCNAFFTAAL 87
           S  +CFF  S KP  +     FFT  L
Sbjct: 150 SSRMCFFKSSKKPAFSHFLIVFFTETL 176


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 10  KKKDYSKNEVKKQTNDDDYVLNK 78
           KK+D  K +  K+   +D  LNK
Sbjct: 259 KKEDKKKKKTIKEKYTEDEELNK 281


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +1

Query: 226 CNKNDYIC 249
           CNK DY C
Sbjct: 261 CNKCDYTC 268


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +1

Query: 226 CNKNDYIC 249
           CNK DY C
Sbjct: 19  CNKCDYTC 26


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 58  DDYVLNKLFAKA 93
           D YV +K+FAKA
Sbjct: 151 DKYVDSKVFAKA 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,190
Number of Sequences: 336
Number of extensions: 609
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)