Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30676
         (593 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54WU8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    33   5.0  
UniRef50_A7KGZ9 Cluster: NapH1; n=6; Streptomyces|Rep: NapH1 - S...    32   8.8  

>UniRef50_Q54WU8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 77

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 451 KKQECNKILNSLGVFLFTFLSRYIFKFYVLLLNKAVCTYQSPKKKKK 591
           KK++  K +N    F   F   + F +Y+  LN  VC   +  KKKK
Sbjct: 19  KKKKKEKKINKFFFFFLFFFFFFFFDYYLYTLNYIVCVQINKAKKKK 65


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 23/56 (41%), Positives = 28/56 (50%)
 Frame = +2

Query: 257 PWTQPTEFLAGSSQWVAIPIRW*ILQNTALARASVRNFL*V*ARELPTRPRVSVIA 424
           P TQP +FLAGSSQ           +   L    + N L +   ELP RPRV+ IA
Sbjct: 70  PKTQPMKFLAGSSQSSRFRSDGRFCEALLLLGLVLANSLRLSPYELPNRPRVAGIA 125


>UniRef50_A7KGZ9 Cluster: NapH1; n=6; Streptomyces|Rep: NapH1 -
           Streptomyces aculeolatus
          Length = 528

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +2

Query: 230 FDYDKERIIPWTQPTEFLAGSSQWVAI 310
           FD DK+  I W QPT+  AG S  +AI
Sbjct: 56  FDLDKDNYIKWAQPTDENAGQSPTLAI 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,419,630
Number of Sequences: 1657284
Number of extensions: 8907544
Number of successful extensions: 19623
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19573
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)