Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30674
         (821 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    48   2e-04
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    38   0.30 
UniRef50_A0BKF7 Cluster: Chromosome undetermined scaffold_112, w...    36   1.2  
UniRef50_UPI000023E35E Cluster: hypothetical protein FG10583.1; ...    35   2.1  
UniRef50_Q4YE84 Cluster: Putative uncharacterized protein; n=1; ...    35   2.8  
UniRef50_P19657 Cluster: Plasma membrane ATPase 2; n=40; Fungi|R...    34   4.9  
UniRef50_A4RRE0 Cluster: Predicted protein; n=2; Ostreococcus|Re...    33   8.6  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 22/35 (62%), Positives = 26/35 (74%)
 Frame = +1

Query: 538 LATKGSTSELTHRHSPLSFSPDLLSGSRFRSGGRF 642
           L T G ++E  HR  PLSFSPDLLSGSRFR+G  +
Sbjct: 381 LKTTGHSTENEHRCCPLSFSPDLLSGSRFRTGAEY 415


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 37.9 bits (84), Expect = 0.30
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +2

Query: 401 FSIADPVDRMVNSRLRPKHVITVPPDPLTVLLSTTSTGH 517
           F++  P D    SR  P HV++ P D L+VLL  +STG+
Sbjct: 21  FTLIGPRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGY 59


>UniRef50_A0BKF7 Cluster: Chromosome undetermined scaffold_112,
           whole genome shotgun sequence; n=3;
           Oligohymenophorea|Rep: Chromosome undetermined
           scaffold_112, whole genome shotgun sequence - Paramecium
           tetraurelia
          Length = 430

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -3

Query: 447 RSRLFTILSTGSAMENVK*LVPSTQTAIQD-HIHLIFNIMYFRKFYCTAYHLFHCSSRI 274
           RS++ ++ STGS +EN K ++    T +QD   HL   I  +  FY +  H F+  S I
Sbjct: 89  RSQIQSLFSTGSQLENNKEVLAQVITPVQDTKNHLPITIGEYTDFYSSKNHAFNMGSII 147


>UniRef50_UPI000023E35E Cluster: hypothetical protein FG10583.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG10583.1 - Gibberella zeae PH-1
          Length = 260

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -2

Query: 208 EKQPDEKHYDQHHHVPKRHARQT 140
           EK P + HYDQ  HVP+ HA QT
Sbjct: 209 EKYPAQDHYDQPSHVPQTHAPQT 231


>UniRef50_Q4YE84 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 71

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = -3

Query: 357 HIHLIFNIMYFRKFYCTAYHLFHCSSRIGTRNIRIKKNYLLSDMILRQKKRNSQMRSITI 178
           H+ LI+ I YF   +  ++H F+  +R      ++ K   +   I  QK+RN+   +  I
Sbjct: 8   HVQLIYKISYFIILFFFSFH-FNACTRKQRCFFKVSKKKFMESNIHGQKRRNNSKGTHVI 66

Query: 177 NTIMY 163
            T+ Y
Sbjct: 67  KTVRY 71


>UniRef50_P19657 Cluster: Plasma membrane ATPase 2; n=40; Fungi|Rep:
            Plasma membrane ATPase 2 - Saccharomyces cerevisiae
            (Baker's yeast)
          Length = 947

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +2

Query: 350  WIWSWIAVCVLGTSYLTFSIADPVDRMVNSRLRPKHVITVPPDPLTVLLSTTSTGH 517
            WIWS    CVLG  Y   S +   DR++N +   +   T   +     +   ST H
Sbjct: 888  WIWSIGIFCVLGGFYYIMSTSQAFDRLMNGKSLKEKKSTRSVEDFMAAMQRVSTQH 943


>UniRef50_A4RRE0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
            Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 1556

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = +2

Query: 65   GHPDYDFGPYEPENE 109
            GHP YDF PYEPE E
Sbjct: 1416 GHPSYDFTPYEPEPE 1430


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,052,821
Number of Sequences: 1657284
Number of extensions: 13199997
Number of successful extensions: 34059
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34024
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)