Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30674
         (821 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38134| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.99)           31   1.5  
SB_57594| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_19683| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7)                  29   6.0  
SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)           29   6.0  
SB_14870| Best HMM Match : Endonuclease_7 (HMM E-Value=0.24)           29   6.0  
SB_19314| Best HMM Match : Rho_N (HMM E-Value=5.2e-05)                 29   6.0  

>SB_38134| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.99)
          Length = 612

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 208 EKQPDEKHYDQHHHVPKRHARQTGRVFLKFLV 113
           ++Q  ++H+  HHH   +H + T +V L  LV
Sbjct: 165 DEQHHKRHHHHHHHHRHKHHKSTTKVLLSLLV 196


>SB_57594| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1386

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 68   HPDYDFGPYEPENEGDQKFEENPASLTS 151
            HPDY    +E  NE ++K  E P S+++
Sbjct: 1018 HPDYSSSSFENGNESEKKAPEPPKSIST 1045


>SB_19683| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 641

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 68  HPDYDFGPYEPENEGDQKFEENPASLTS 151
           HPDY    +E  NE ++K  E P S+++
Sbjct: 172 HPDYSSSSFENGNESEKKAPEPPQSISN 199


>SB_38160| Best HMM Match : Toxin_29 (HMM E-Value=3.7)
          Length = 534

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +1

Query: 310 AIEFSKIHNIKY*MDMVLDCGLCAWYELFNVLHSRSCRQNGKQSTSPKTRHYGSSRS 480
           AI+ S+   ++  +D  LD  L  + + F+VLH +S R    QS +  +R    SRS
Sbjct: 10  AIKISESWRLRIFLDE-LDTSLTEFLKWFSVLHCQSFRNTLSQSEAENSREPFDSRS 65


>SB_25693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.012)
          Length = 826

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = -3

Query: 366 IQDHIHLIFNIMYFRKFYCTAYHLFHCSSRIGTRNIRIKKNYLLSDMILRQKKRNSQMRS 187
           I DH H+ +NI    K   T    F   +RI      +K+N    D ILR     S++ +
Sbjct: 619 ISDHCHITYNIKIVNKITVTQSKSFAKHARIFCHGTNVKENV---DSILRSDIYRSKLDN 675

Query: 186 I 184
           +
Sbjct: 676 L 676


>SB_14870| Best HMM Match : Endonuclease_7 (HMM E-Value=0.24)
          Length = 276

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 404 RTLNNSYQAHRPQSKTISI*YLILCIFENSIAPRIIYFTVQ 282
           R+    YQ H+P        YLI CI +   +P+++  TVQ
Sbjct: 75  RSFTKQYQKHKPSGFC----YLIKCIDDGVFSPKLVQRTVQ 111


>SB_19314| Best HMM Match : Rho_N (HMM E-Value=5.2e-05)
          Length = 708

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 404 RTLNNSYQAHRPQSKTISI*YLILCIFENSIAPRIIYFTVQ 282
           R+    YQ H+P        YLI CI +   +P+++  TVQ
Sbjct: 522 RSFTKQYQKHKPSGFC----YLIKCIDDGVFSPKLVQRTVQ 558


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,892,976
Number of Sequences: 59808
Number of extensions: 412198
Number of successful extensions: 1015
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2299585728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)