Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30673
(742 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 52 6e-07
SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 48 6e-06
SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22) 47 2e-05
SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05) 44 1e-04
SB_55040| Best HMM Match : TatC (HMM E-Value=0.59) 42 4e-04
SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5) 42 5e-04
SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3) 41 0.001
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 40 0.002
SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042) 40 0.002
SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15) 40 0.002
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 40 0.002
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 40 0.002
SB_51144| Best HMM Match : Sugar_tr (HMM E-Value=0.13) 38 0.006
SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015) 38 0.006
SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073) 38 0.011
SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022) 37 0.020
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 36 0.026
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 34 0.11
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 34 0.11
SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024) 34 0.14
SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7) 33 0.24
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 33 0.24
SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028) 31 0.74
SB_30081| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_42747| Best HMM Match : Sugar_tr (HMM E-Value=0.23) 30 1.7
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 30 2.3
SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42) 29 4.0
SB_14086| Best HMM Match : POR (HMM E-Value=7.7) 29 4.0
SB_12353| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05) 29 5.2
SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23) 29 5.2
SB_52873| Best HMM Match : Oleosin (HMM E-Value=3) 28 6.9
SB_11256| Best HMM Match : MFS_1 (HMM E-Value=1.7e-13) 28 9.1
SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4) 28 9.1
SB_15303| Best HMM Match : Orexin_rec2 (HMM E-Value=6) 28 9.1
SB_12953| Best HMM Match : Defensin_2 (HMM E-Value=3.6) 28 9.1
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 497 DLDLTTQTKGWL-NSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQN 673
DL + W NSI+F G + G +G ++D GR++VL S + ASSF
Sbjct: 84 DLVCEYSSLSWATNSIMFTGWLFGNIVFGILSDKYGRRKVLFISSCMVCWVAFASSFVPY 143
Query: 674 YELFMFFRFVNGAALGGS 727
Y L+ FRF G LGGS
Sbjct: 144 YWLYAVFRFFIGFGLGGS 161
>SB_11833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +2
Query: 533 NSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNGA 712
NSI FI + GA A ++D GRK V+ I +L +AS+F+ Y +F FR + GA
Sbjct: 257 NSITFILWIFGAMAGSIISDKFGRKIVVFPCVIFASLCGLASAFANKYWVFALFRALLGA 316
Query: 713 ALGG 724
+GG
Sbjct: 317 GIGG 320
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 48.4 bits (110), Expect = 6e-06
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
L S+ FIGM+ G++ G V+D+ GRK L + + A VAS+ F F RF+ G
Sbjct: 113 LQSVYFIGMLFGSFLTGMVSDAWGRKNCLFLFTGIMLAAGVASALVDCVSFFAFLRFLVG 172
Query: 710 AALGGS 727
L G+
Sbjct: 173 FGLSGA 178
>SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22)
Length = 1421
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/65 (40%), Positives = 36/65 (55%)
Frame = +2
Query: 533 NSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNGA 712
NSI FI + GA A + D GRK V+ I +L +AS+F+ Y +F FR + GA
Sbjct: 511 NSITFILWIFGAMAGSIIGDKFGRKIVVFPCVIFASLCGLASAFANKYWVFALFRALLGA 570
Query: 713 ALGGS 727
+G S
Sbjct: 571 GIGES 575
>SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05)
Length = 457
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
L S F+GM++G+ G ++D+ GRK+ L + +A V S+ F F RFV G
Sbjct: 79 LQSCFFVGMLIGSLVCGVISDAWGRKKCLFISYTLLGVAGVGSACVDCVSFFAFLRFVVG 138
Query: 710 AALGG 724
L G
Sbjct: 139 FGLTG 143
>SB_55040| Best HMM Match : TatC (HMM E-Value=0.59)
Length = 275
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
L S F GM++G+ G ++D+ GRK+ + +A V+ F F F RFV G
Sbjct: 114 LQSCFFAGMLIGSLVSGLISDAWGRKKCFYLSYALMVVAGVSCVFVDCISFFAFLRFVVG 173
Query: 710 AALGGS 727
A G+
Sbjct: 174 AGTAGA 179
>SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +2
Query: 521 KGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRF 700
+G +S+IF G ++GA G ++D GR+ V+ S+ A V S+ S + LF+ R
Sbjct: 106 QGVSSSVIFAGWLLGAIFIGWLSDRTGRRYVVYFGSLGLLAAAVVSALSPFFWLFVLSRA 165
Query: 701 VNGAALGGS 727
+ G +GGS
Sbjct: 166 IVGVMIGGS 174
>SB_20443| Best HMM Match : Sugar_tr (HMM E-Value=3.5)
Length = 563
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +2
Query: 329 DPEKGSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDL 508
D EK E AI+ GYG F LL + G ++ M++ ++ + P+ +C+ +L
Sbjct: 40 DQEKEDKELTYTVEDAIDRLGYGLFQIKLLLMIGFAWMADSMEITILAIMCPAIRCEWNL 99
Query: 509 TTQTKGWLNSII-FIGMMVGAYAWGSVADSLGRKRVLIAISIV 634
+T W ++I + +++ + G+V ++ + L +S V
Sbjct: 100 ST----WAEALITTVTLLMRCHTHGAVTRTVTLLKALSHVSAV 138
>SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3)
Length = 509
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
L + F GM++G+ G+++D LGRK+ + +I+ ++ +SSF F F RFV G
Sbjct: 104 LQACDFSGMVLGSLISGNLSDRLGRKKWCLYSAIILLISSTSSSFVDCPSFFAFLRFVVG 163
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +2
Query: 497 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNY 676
DL L W S++ IG M+G G + D +GRK LI S+ + F +N
Sbjct: 75 DLYLNADEITWFGSLLNIGAMLGGPIQGFLIDLIGRKFALILTSVPFCSGWLLIGFGKNA 134
Query: 677 ELFMFFRFVNGAALG 721
+ RF++G +G
Sbjct: 135 AMLNAGRFMSGLGVG 149
>SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042)
Length = 277
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
+ S+ F+G + G++ G+V+D+ GRK L + A A + +SF ++ + F G
Sbjct: 148 VQSMYFVGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILLFFAG 207
Query: 710 AALGGS 727
+L S
Sbjct: 208 LSLASS 213
>SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15)
Length = 839
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 521 KGWLNSIIFIGMMVGAYAWGSVADSLGRK-RVLIAISIVNALAIVASSFSQNYELFMFFR 697
K ++ G++VG+ + +V+D GR+ V I+I+++ A+ S FS LF+ R
Sbjct: 118 KALTQAMYMAGLLVGSLVFSAVSDRFGRRIGVFISIALL-AVCGTTSGFSNCLSLFILLR 176
Query: 698 FVNGAALGG 724
FV G A G
Sbjct: 177 FVTGMANAG 185
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/82 (20%), Positives = 43/82 (52%)
Frame = +2
Query: 476 ILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVA 655
++ ++ + LT W +S++ +G ++GA G + GRK ++A ++ + +
Sbjct: 72 LIAESKESVKLTVSQGSWFSSLVTLGAILGAPLGGWTLEYFGRKGTIMACAVPFEVGWML 131
Query: 656 SSFSQNYELFMFFRFVNGAALG 721
+++ ++ + RF+ G A+G
Sbjct: 132 IAYANSHYMLYIGRFITGLAVG 153
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
+ S+ F+G + G++ G+V+D+ GRK L + A A + +SF ++ + F G
Sbjct: 151 VQSMYFVGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILIFFAG 210
Query: 710 AALGGS 727
+L S
Sbjct: 211 LSLASS 216
>SB_51144| Best HMM Match : Sugar_tr (HMM E-Value=0.13)
Length = 371
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 491 QCDLDLTTQTKGWL-NSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFS 667
Q DL WL NS++F G +GA G +AD GR+ VL +A ++A +FS
Sbjct: 108 QFDLVCDNSFHAWLANSMLFFGWALGAIILGMIADKYGRRSVLFP----SAACVIAITFS 163
Query: 668 QNY 676
++
Sbjct: 164 MSF 166
>SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015)
Length = 292
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 536 SIIFIGMMVGAYAWGSVADSLGRK-RVLIAISIVNALAIVASSFSQNYELFMFFRFVNGA 712
++ G++VG+ + S++D GR+ + ++I ++ A IV S S +F FRF GA
Sbjct: 4 AVYMAGLLVGSVTFSSISDHFGRRLSMFLSIFLMAACGIV-SGVSDCLSMFALFRFGAGA 62
Query: 713 ALGG 724
A G
Sbjct: 63 ACAG 66
>SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)
Length = 582
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 527 WL-NSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFV 703
W+ NS++F G +GA G +AD GR VL +I+ +A +F + L + RF
Sbjct: 409 WMANSMLFFGWAIGAIFLGIIADKYGRCSVLFPSAILVMGLSLAMAFVKKAWLVLVLRFF 468
Query: 704 NGAALGG 724
G GG
Sbjct: 469 IGFFEGG 475
>SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022)
Length = 453
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
+ S F GM+VG+ G +D GR+ L+ S + + ++F+ L F RF G
Sbjct: 118 VQSCFFAGMLVGSMVGGWASDRFGRRLCLLVGSAIMLILSFGTAFADCLSLLAFLRFGVG 177
Query: 710 AA 715
A
Sbjct: 178 VA 179
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 36.3 bits (80), Expect = 0.026
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
+ S+ F+G + G+ G+++D+ GRK L + A A + +SF ++ + F G
Sbjct: 57 VQSMYFVGYLFGSLLSGTLSDAFGRKISLTVSVALQAAAFIGASFVTSHTALIILIFFAG 116
Query: 710 AALGGS 727
++ S
Sbjct: 117 LSIASS 122
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 557 MVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNGAALGGSGPV 736
+VGA G + DSLGRK VL+ S V V + + + R V G +GG+
Sbjct: 101 IVGAVLGGILNDSLGRKPVLVLCSGVFTAGAVVMGVAGTKHVLLVGRLVIGLGIGGASMT 160
Query: 737 I 739
+
Sbjct: 161 V 161
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 557 MVGAYAWGSVADSLGRKRVLIA---ISIVNALAIVASSFSQNYELFMFFRFVNGAALG 721
M+GA A A+ GRKR L+A ++IV AL + S F++ L RFV G G
Sbjct: 1 MIGALAGPLFANRFGRKRSLLANNGLAIVGALLMFLSYFAKTSPLLTVGRFVIGINCG 58
>SB_31704| Best HMM Match : MFS_1 (HMM E-Value=0.024)
Length = 625
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
+ S+ F GM+VG++ G V+D GRK + L S F R V G
Sbjct: 91 VQSMFFAGMLVGSFVSGPVSDIYGRKCCSFVFTATLILGAAVSVVVDCVSFLCFLRIVVG 150
Query: 710 AALGG 724
G
Sbjct: 151 VGCSG 155
>SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7)
Length = 608
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 341 GSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 511
G S A+E GYG + L + ++ M++ +S ++P +C+ DL+
Sbjct: 79 GKTSPTFTVSDAVESAGYGWYQLRLGIISSFQRVADAMEITMLSILVPYVKCEWDLS 135
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
+ S F GM++G+ G +D GR+ L+ S + + + F+ L RF G
Sbjct: 117 VQSCFFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVG 176
Query: 710 AAL 718
AL
Sbjct: 177 FAL 179
>SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 968
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNG 709
+ S F GM++G+ G +D GR+ L+ S + + + F+ L RF G
Sbjct: 630 VQSCFFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVG 689
Query: 710 AAL 718
AL
Sbjct: 690 FAL 692
>SB_4525| Best HMM Match : Sugar_tr (HMM E-Value=0.028)
Length = 630
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIA 622
L ++ F GMM+G+ G +AD+ GRK + A
Sbjct: 303 LQAVFFAGMMIGSVISGMMADAWGRKPCIFA 333
>SB_30081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 464 SMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNAL 643
S + +LP + + T Q W+ S + G + G + + + AL
Sbjct: 103 SFAVVLPVFMQEYNETRQRVAWMGSAAWALSFAGLPVSAPLCARFGCRTIATVGVLTCAL 162
Query: 644 AIVASSFSQNYELFMF 691
A++ASSF+++ L F
Sbjct: 163 ALIASSFARSLNLLYF 178
>SB_42747| Best HMM Match : Sugar_tr (HMM E-Value=0.23)
Length = 527
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 542 IFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNY 676
+F+GM+ A G ++D GRK + A V + +VA SF Y
Sbjct: 114 MFVGMLFTAIVVGPLSDRFGRKICVFASMAVLPVFLVAYSFETFY 158
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +2
Query: 536 SIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAI 649
+I F+GM VG+ G ++D++GRK I++ + +AL +
Sbjct: 388 AIFFVGMTVGSVLSGMLSDAIGRK---ISLGLNSALMV 422
>SB_40645| Best HMM Match : zf-C2H2 (HMM E-Value=3.30006e-42)
Length = 554
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 239 CDVKGDLQLNGPGSKTAELGVVPSVKKSKSDPEKGSNSEKAD 364
CD K L NGP E G + S PE+ N +KAD
Sbjct: 300 CDKKALLLRNGPVMTREEGGKSVESHRKGSSPERVENEDKAD 341
>SB_14086| Best HMM Match : POR (HMM E-Value=7.7)
Length = 292
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 551 GMMVGAYAWGSVADSLGRKRVLIAISIVNA 640
G +GAYAW + A S+G V A+ I+ A
Sbjct: 92 GSCLGAYAWSNAAQSIGLPVVCDAVFILEA 121
>SB_12353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 530 LNSIIFIGMMVGAYAWGSVADSLGRKRVLI 619
L S F GM+VG+ G +D+ GRK L+
Sbjct: 114 LQSCFFAGMLVGSLISGVASDTWGRKECLL 143
>SB_30134| Best HMM Match : Lectin_C (HMM E-Value=5.4e-05)
Length = 131
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 387 PDMAASTTCCWQYAVSSALPRRWTSSRCRSSY 482
PD + C + +S L RRW C +SY
Sbjct: 89 PDNSGGHENCGHFLLSGKLARRWNDISCNNSY 120
>SB_35310| Best HMM Match : Cadherin (HMM E-Value=5.9e-23)
Length = 1250
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 209 TDPGPKNPHNCDVKGDLQLNGPGSKTAELGVVPSVK 316
TDP HNC + Q G T E G V VK
Sbjct: 546 TDPDKTQTHNCSLVNSAQSTGSSYFTVENGTVLEVK 581
>SB_52873| Best HMM Match : Oleosin (HMM E-Value=3)
Length = 152
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/47 (19%), Positives = 26/47 (55%)
Frame = +2
Query: 434 VSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYA 574
+ ++ M++ +S ++P +C+ DL+ + +++ + + AYA
Sbjct: 21 MQVADAMEITMLSILVPYVKCEWDLSIVQVAMITTMLIVSSVAVAYA 67
>SB_11256| Best HMM Match : MFS_1 (HMM E-Value=1.7e-13)
Length = 506
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 557 MVGAYAWGSVADSLGRKRVLIAISIVNALAIVAS 658
++ A WG +AD GR R ++ ++IV ++ I S
Sbjct: 83 LLAAPMWGIIADKTGRYRCILLMNIVLSVIIYFS 116
>SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4)
Length = 777
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 17 FTSPHPHRS*PPEVAERSQTTRKKHIGSS 103
+T P P PP V RSQ R K + S+
Sbjct: 408 YTKPEPKGRRPPRVGRRSQRHRSKSLNST 436
>SB_15303| Best HMM Match : Orexin_rec2 (HMM E-Value=6)
Length = 421
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 394 WPLPLHAVGSMRSRQHFRGDGRHLDV 471
W L + + + R HF G G H+DV
Sbjct: 185 WNLSIEKLRDFKKRAHFLGRGNHVDV 210
>SB_12953| Best HMM Match : Defensin_2 (HMM E-Value=3.6)
Length = 433
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 176 YKAARPHRMVETDPGPKNPHNCDVKGDLQLNGPGSKTAELGVVPSVKKSKSDPE 337
+K ++ + + P +P D K L L GS + LGVVP V + PE
Sbjct: 335 FKRGTSYQKTKKENQP-SPMTRDFKEHLTLTNTGSGSISLGVVPEVLIPEVSPE 387
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,151,178
Number of Sequences: 59808
Number of extensions: 534616
Number of successful extensions: 1548
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1998111622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -