Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30667
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49937-8|CAD44113.1|  546|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z49867-4|CAD44109.1|  546|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AL033514-27|CAA22088.1|  363|Caenorhabditis elegans Hypothetical...    27   9.7  
AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical ...    27   9.7  

>Z49937-8|CAD44113.1|  546|Caenorhabditis elegans Hypothetical
           protein C33D3.5 protein.
          Length = 546

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 385 SSLNYGYDSQKSRKKSIKYKGGVCFLNFQIK 293
           S +NYG D +K R+ S+ +  G+  +  Q+K
Sbjct: 354 SPINYGMDVEKIRENSVIFYNGISSMLAQLK 384


>Z49867-4|CAD44109.1|  546|Caenorhabditis elegans Hypothetical
           protein C33D3.5 protein.
          Length = 546

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = -3

Query: 385 SSLNYGYDSQKSRKKSIKYKGGVCFLNFQIK 293
           S +NYG D +K R+ S+ +  G+  +  Q+K
Sbjct: 354 SPINYGMDVEKIRENSVIFYNGISSMLAQLK 384


>AL033514-27|CAA22088.1|  363|Caenorhabditis elegans Hypothetical
           protein Y75B8A.28 protein.
          Length = 363

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +2

Query: 176 CNNNDQWLKED**LRLSYCNRYFMDKLIWNNIEFSY 283
           CNNN +WL+E    R  + N  F++ L   NI FS+
Sbjct: 96  CNNNGEWLQEYSQARKIFKNIVFLNFLAKKNI-FSF 130


>AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical
           protein F56H1.3 protein.
          Length = 1174

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 120 HENNKRGRDFRRDNDLTFDVTITTSGSKKINDCD 221
           HE   R +DF+    + ++   T S   K NDCD
Sbjct: 192 HEAQTRDKDFKIGQKIPYESFETISSKIKNNDCD 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,496,666
Number of Sequences: 27780
Number of extensions: 250061
Number of successful extensions: 517
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)