Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30656
         (795 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    25   0.70 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   3.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.6  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 372 QNFGIRFREILYQNHIVVLLFVHGPLGATP 283
           Q  GI F  ++Y  + + LL + G   ATP
Sbjct: 233 QILGILFVGVIYTTYTIFLLLIFGSGSATP 262


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
 Frame = -3

Query: 466 KWLF-----RNRSASRPVPTCRLSLRLYNTHESTTE 374
           KWLF     RNR ++    +  LS  L NTH+   E
Sbjct: 325 KWLFKKKKRRNRESTTNTQSSSLSEFLTNTHKRKIE 360


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 693 ISICMAGFSEAYYCHGNVISS 755
           +S C  GFS + +C+ +  SS
Sbjct: 135 VSSCHQGFSSSTWCNYSAYSS 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,396
Number of Sequences: 336
Number of extensions: 5035
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)