Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30651
(674 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 122 2e-28
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 122 2e-28
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 48 4e-06
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 47 1e-05
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 46 3e-05
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 44 1e-04
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 44 1e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 43 2e-04
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 43 2e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 41 7e-04
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 41 7e-04
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 41 7e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 41 7e-04
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 41 9e-04
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 41 9e-04
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 41 9e-04
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 40 0.001
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 40 0.002
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 40 0.002
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 39 0.003
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 39 0.004
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 38 0.005
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 38 0.005
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 38 0.005
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 38 0.006
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 38 0.006
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 38 0.008
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 38 0.008
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 38 0.008
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 37 0.011
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 37 0.011
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 37 0.011
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 37 0.011
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 37 0.014
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 37 0.014
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 36 0.019
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 36 0.019
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 36 0.019
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 36 0.025
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 36 0.033
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 36 0.033
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 35 0.057
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 35 0.057
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 35 0.057
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 34 0.075
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.075
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 34 0.075
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 34 0.100
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 34 0.100
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 34 0.100
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 33 0.13
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 33 0.13
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 33 0.13
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 33 0.13
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 33 0.23
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 32 0.40
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 32 0.40
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 32 0.40
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 32 0.40
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 31 0.53
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 31 0.70
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 31 0.70
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 31 0.93
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 31 0.93
At3g22740.1 68416.m02868 homocysteine S-methyltransferase 3 (HMT... 31 0.93
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 31 0.93
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 30 1.2
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 30 1.2
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 30 1.2
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 30 1.2
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 30 1.2
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 30 1.6
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 30 1.6
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 30 1.6
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 30 1.6
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 30 1.6
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 30 1.6
At3g63250.1 68416.m07107 homocysteine S-methyltransferase 2 (HMT... 29 2.1
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 29 2.8
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 29 2.8
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 29 2.8
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 29 2.8
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 29 2.8
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 29 2.8
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 29 3.8
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 29 3.8
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 29 3.8
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 29 3.8
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 29 3.8
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 29 3.8
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 28 5.0
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 28 5.0
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 28 5.0
At1g32690.1 68414.m04031 expressed protein similar to hypothetic... 28 5.0
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 28 5.0
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 28 6.6
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 28 6.6
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 28 6.6
At2g02470.1 68415.m00186 PHD finger family protein contains Pfam... 28 6.6
At1g23030.1 68414.m02877 armadillo/beta-catenin repeat family pr... 28 6.6
At1g19485.1 68414.m02427 AT hook motif-containing protein contai... 28 6.6
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 27 8.7
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 122 bits (294), Expect = 2e-28
Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 9/218 (4%)
Frame = +1
Query: 46 MSGDALEAQLQVRFITKQEQ-YAVPDSPYAIQCNVHPADLNTLINAILKETSPSFEKAVI 222
+ G+ + +L V+F+TK + + VP + AI NV L++++N+I++ +P + K
Sbjct: 3 IDGEDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEW-KTEP 61
Query: 223 FDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHS- 399
FDFL+ GEL+ SL E L KG+S E TLE+EY+ ++ +HDDWVSAV S
Sbjct: 62 FDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNGSSP 121
Query: 400 SWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWV-SFQGDQATFVSGSHDQTAILW 576
+IL+G YD +WS+ G + GH+ + +V+ V S + T + S D+T L+
Sbjct: 122 RFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLF 181
Query: 577 VWNVPRNSVDCMI------TYRGHDKGIECLSVSADGN 672
++ P SVD RGH ++ +S GN
Sbjct: 182 KFD-PAESVDSTTKVRAYKILRGHKASVQSVSAQKSGN 218
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 364 HDDWVSAVQAH-SSW--ILSGSYDNSLHIWSTK 453
H W+SA + H SSW +LS SYD + +W +
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLR 389
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 122 bits (294), Expect = 2e-28
Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 9/218 (4%)
Frame = +1
Query: 46 MSGDALEAQLQVRFITKQEQ-YAVPDSPYAIQCNVHPADLNTLINAILKETSPSFEKAVI 222
+ G+ + +L V+F+TK + + VP + AI NV L++++N+I++ +P + K
Sbjct: 3 IDGEDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEW-KTEP 61
Query: 223 FDFLVCGELLCASLAEHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHS- 399
FDFL+ GEL+ SL E L KG+S E TLE+EY+ ++ +HDDWVSAV S
Sbjct: 62 FDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNGSSP 121
Query: 400 SWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWV-SFQGDQATFVSGSHDQTAILW 576
+IL+G YD +WS+ G + GH+ + +V+ V S + T + S D+T L+
Sbjct: 122 RFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLF 181
Query: 577 VWNVPRNSVDCMI------TYRGHDKGIECLSVSADGN 672
++ P SVD RGH ++ +S GN
Sbjct: 182 KFD-PAESVDSTTKVRAYKILRGHKASVQSVSAQKSGN 218
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 364 HDDWVSAVQAH-SSW--ILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSFQGDQ 531
H W+SA + H SSW +LS SYD + +W + L+ I H V + W ++G+
Sbjct: 357 HSSWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW--WKGE- 413
Query: 532 ATFVSGSHD 558
+ VSG D
Sbjct: 414 -SVVSGGAD 421
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 48.4 bits (110), Expect = 4e-06
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Frame = +1
Query: 364 HDDWVSA-VQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATF 540
HDD ++A V + ++ +GS D + +W+ K + + T + AV+ ++ D
Sbjct: 234 HDDAINAIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVL 293
Query: 541 VSGSHDQTAILWVWNVPRNSVDCMITY----RGHDKGIECLSVSAD 666
SG+ D++ ++W + + + ++ RGH K I CL+V++D
Sbjct: 294 YSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASD 339
Score = 35.5 bits (78), Expect = 0.033
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIW-----STKGQHKLAI-PGHTSPVK----AVSWV 513
H + + S +LSGS D SL +W +G LA+ GHT PVK +VS
Sbjct: 327 HRKAIMCLAVASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDS 386
Query: 514 SFQGDQATFV-SGSHDQTAILWVWNVPRNSV 603
D + V SGS D + L VWN+ +S+
Sbjct: 387 DSNSDYSCMVYSGSLDLS--LKVWNLRVSSI 415
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +1
Query: 364 HDDWVS--AVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
H D VS A+ S + S S+D S IW T K + A++ + D
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRT-SDFKCLDSIEKAHDDAINAIVVSKDGFV 249
Query: 538 FVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADG 669
+ +GS D+ + VWN + T H + L++S DG
Sbjct: 250 Y-TGSADKK--IKVWNKKDKKHSLVATLTKHLSAVNALAISEDG 290
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 403 WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
WI S S+D S+ +W+ GQ GH PV VSW D +SGS D T +W
Sbjct: 374 WIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSW---SADSRLLLSGSKDSTLKIW 429
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 391 AHSSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTA 567
A S +LSGS D++L IW + + K +PGH V AV W S G++ VSG D+
Sbjct: 412 ADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDW-SPDGEKV--VSGGKDRVL 468
Query: 568 ILW 576
LW
Sbjct: 469 KLW 471
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +1
Query: 472 IPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECL 651
I GH +AV VSF D SGS D T LW + + T +GH + +
Sbjct: 105 IAGHA---EAVLCVSFSPDGKQLASGSGDTTVRLW----DLYTETPLFTCKGHKNWVLTV 157
Query: 652 SVSADG 669
+ S DG
Sbjct: 158 AWSPDG 163
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +1
Query: 322 LERFPAPTPQDCLM----HDDWVSAVQAH--SSWILSGSYDNSLHIWSTK-GQHKLAIPG 480
L + A +P +CL H ++V V + S+ I+SGS+D ++ IW K G+ I
Sbjct: 109 LRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKA 168
Query: 481 HTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
H+ P +S V F D + VS SHD + +W
Sbjct: 169 HSMP---ISSVHFNRDGSLIVSASHDGSCKIW 197
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +1
Query: 457 QHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDK 636
+H + GHT+ A+S V F D S S D+T ILW + + Y GH
Sbjct: 34 RHLKTLEGHTA---AISCVKFSNDGNLLASASVDKTMILW----SATNYSLIHRYEGHSS 86
Query: 637 GIECLSVSADGN 672
GI L+ S+D +
Sbjct: 87 GISDLAWSSDSH 98
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +1
Query: 394 HSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSH-DQTA 567
+ +I+SGS DN +++W + ++ L + GHT V +VS Q + ++ SG+H D+T
Sbjct: 269 NGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISS--SGNHLDKTI 326
Query: 568 ILW 576
+W
Sbjct: 327 RIW 329
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
+ S S D ++ +WS + GH+S + ++W S D S S D T L +W
Sbjct: 58 LASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS---DSHYTCSASDDCT--LRIW 112
Query: 583 NVPRNSVDCMITYRGHDKGIECLSVSADGN 672
+ R+ +C+ RGH + C++ + N
Sbjct: 113 DA-RSPYECLKVLRGHTNFVFCVNFNPPSN 141
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +1
Query: 364 HDDWVSAVQAHSS--WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQA 534
H WV +V S W +GS D ++ IW G KL + GH V+ ++ VS ++
Sbjct: 175 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLA-VS---NRH 230
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 657
T++ + D + W++ +N V + +Y GH G+ CL++
Sbjct: 231 TYMFSAGDDKQVK-CWDLEQNKV--IRSYHGHLSGVYCLAL 268
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 397 SSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 573
S+ I+SGS+D ++ IW T G+ +P H+ PV A V F D + VS S+D +
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTA---VDFNRDGSLIVSSSYDGLCRI 181
Query: 574 W 576
W
Sbjct: 182 W 182
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +1
Query: 364 HDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQH--KLAIPGHTSPVKAVSWVSFQGDQ 531
H D V+AV + S I+S SYD IW + H K I P VS+V F +
Sbjct: 154 HSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPP---VSFVRFSPNG 210
Query: 532 ATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLS 654
+ G+ D T L +WN+ +S + TY GH C+S
Sbjct: 211 KFILVGTLDNT--LRLWNI--SSAKFLKTYTGHVNAQYCIS 247
Score = 35.1 bits (77), Expect = 0.043
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = +1
Query: 349 QDCLMHDDWVS--AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSF 519
Q+ H++ +S A + + +I+S S D +L +W + G + GHT+ V+ F
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN---F 121
Query: 520 QGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
VSGS D+T + +W+V C+ H + + + DG+
Sbjct: 122 NPQSNMIVSGSFDET--VRIWDVTTGK--CLKVLPAHSDPVTAVDFNRDGS 168
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
I+SGS DN +H+W + L + GHT + V V+ + SGS D+T +W
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHT---ETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 394 HSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAI 570
+ +IL G+ DN+L +W+ L GH + +S + VSGS D
Sbjct: 209 NGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVH 268
Query: 571 LWVWN 585
+W N
Sbjct: 269 MWELN 273
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
S + SGS DN++HIW+ + G + GH S VK V+W + S S D+T I+W
Sbjct: 131 SMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPI---GSFIASQSDDKTVIIW 187
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +1
Query: 364 HDDWVSAVQAHSS--WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQA 534
H WV +V S W +GS D ++ IW G KL + GH V+ ++ VS ++
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLA-VS---NRH 224
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 657
T++ + D + W++ +N V + +Y GH G+ CL++
Sbjct: 225 TYMFSAGDDKQVK-CWDLEQNKV--IRSYHGHLHGVYCLAL 262
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 397 SSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAIL 573
SS+I SGS D+ ++IW+ K L + GH+ V VSW + S S DQT +
Sbjct: 455 SSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSW--NPKNPRMLASASDDQTIRI 512
Query: 574 W 576
W
Sbjct: 513 W 513
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTKG-QHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 558
AV + ++ +G D +HIW + +H A PGH + VS + F+ + SGS D
Sbjct: 229 AVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRN---TVSCLCFRYGTSELYSGSFD 285
Query: 559 QTAILWVWNV 588
+T + VWNV
Sbjct: 286 RT--VKVWNV 293
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
+L+G+ + +W + + A GH S AV + F G+ SGS D A L +W
Sbjct: 73 VLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPF-GE--FLASGSSD--ANLKIW 127
Query: 583 NVPRNSVDCMITYRGHDKGIECLSVSADG 669
++ + C+ TY+GH +GI + + DG
Sbjct: 128 DIRKKG--CIQTYKGHSRGISTIRFTPDG 154
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 403 WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
W++SG DN + +W T G+ H P+++ + F + +GS D+T W
Sbjct: 156 WVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRS---LDFHPLEFLLATGSADRTVKFW 211
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +1
Query: 364 HDDWVSAVQAHSSW-ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVK-AVSWVSFQGDQA 534
HDD V+A+ ++ + +GS D + +W+ G+ + + K AV+ ++ D +
Sbjct: 234 HDDAVNAIAVSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGS 293
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGI 642
SGS D++ ++W N + RGHDK I
Sbjct: 294 VLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAI 329
Score = 40.7 bits (91), Expect = 9e-04
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKG-QHKLAIPGHTSPVKAVSWVSFQGDQATF 540
H D V+A+ +I S S+D +L IW + K +I H V A++ VS G T
Sbjct: 194 HADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIA-VSTNG---TV 249
Query: 541 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
+GS D+ +W + T H + L+++ DG+
Sbjct: 250 YTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGS 293
Score = 35.5 bits (78), Expect = 0.033
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLA----IPGHTSPVKAVSWVSFQ--G 525
HD + ++ S +LSGS D ++ IW + + GHT PVK+++ V +
Sbjct: 325 HDKAILSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELD 384
Query: 526 DQATFVSGSHDQTAILWVWNV--PRNS 600
D + +SGS D W +V P NS
Sbjct: 385 DVVSIISGSLDGEVKCWKVSVTKPDNS 411
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 40.7 bits (91), Expect = 9e-04
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +1
Query: 364 HDDWVSAV--QAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
H + V AV Q + W+ SGS D ++ IW + V AV+ V +Q
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAP---GCQKEYESVAAVNTVVLHPNQTE 133
Query: 538 FVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADG 669
+SG DQ + VW++ NS C + D + L+V DG
Sbjct: 134 LISG--DQNGNIRVWDLRANSCSCELVPE-VDTAVRSLTVMWDG 174
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 40.7 bits (91), Expect = 9e-04
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWIL--SGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQA 534
H+ V V H+S L SG D + +W+ K L + GH ++ V F +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQ---FHHEYP 106
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLS 654
VS S DQT +W W S C+ GH+ + C S
Sbjct: 107 WIVSASDDQTIRIWNW----QSRTCVSVLTGHNHYVMCAS 142
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 463 KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRN-SVDCMITYRGHDKG 639
K + GH + V+W +F VSG+ D+ LW N + VD T RGH
Sbjct: 197 KYVLEGHD---RGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD---TLRGHMNN 250
Query: 640 IECLSVSA 663
+ + A
Sbjct: 251 VSSVMFHA 258
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 40.7 bits (91), Expect = 9e-04
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
+L+G+ + +W + + A GH S AV + F G+ SGS D L VW
Sbjct: 22 VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF-GE--FLASGSSDTN--LRVW 76
Query: 583 NVPRNSVDCMITYRGHDKGIECLSVSADG 669
+ + C+ TY+GH +GI + S DG
Sbjct: 77 DTRKKG--CIQTYKGHTRGISTIEFSPDG 103
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +1
Query: 364 HDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
H SAV+ H ++ SGS D +L +W T+ K I + + +S + F D
Sbjct: 48 HRSNCSAVEFHPFGEFLASGSSDTNLRVWDTR--KKGCIQTYKGHTRGISTIEFSPDGRW 105
Query: 538 FVSGSHDQTAILW 576
VSG D +W
Sbjct: 106 VVSGGLDNVVKVW 118
Score = 32.7 bits (71), Expect = 0.23
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 403 WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWV 579
W++SG DN + +W T G+ H P+++ + F + +GS D+T W
Sbjct: 105 WVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRS---LDFHPLEFLLATGSADRTVKFW- 160
Query: 580 WNVPRNSVDCMITYRGHDKGIECLSVSADG 669
+ + + T R G+ ++ DG
Sbjct: 161 ---DLETFELIGTTRPEATGVRAIAFHPDG 187
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWIL--SGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQA 534
H+ V V H+S L SG D + +W+ K L + GH ++ V F +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQ---FHHENP 106
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLS 654
VS S DQT +W W S C+ GH+ + C S
Sbjct: 107 WIVSASDDQTIRIWNW----QSRTCISVLTGHNHYVMCAS 142
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 463 KLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRN-SVDCMITYRGHDKG 639
K + GH + V+W SF VSG+ D+ LW N + VD T RGH
Sbjct: 197 KYVLEGHD---RGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVD---TLRGHMNN 250
Query: 640 IECLSVSA 663
+ + A
Sbjct: 251 VSSVMFHA 258
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATF 540
H W+ +++ +++GS D + +WS ++G + H PV++V + F D+
Sbjct: 1021 HTKWIRSIRMVEDTLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPF--DKG-I 1077
Query: 541 VSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
++GS D +L W + C+ H I LS++A N
Sbjct: 1078 ITGSAD--GLLRFWENDEGGIKCVKNITLHSSSI--LSINAGEN 1117
Score = 33.9 bits (74), Expect = 0.100
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATF 540
H V A+ + I+SGS D S+ +W + L + GH S V V +S G++
Sbjct: 898 HTGTVRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLS--GERV-- 953
Query: 541 VSGSHDQTAILW 576
++ +HD T +W
Sbjct: 954 LTAAHDGTVKMW 965
Score = 32.3 bits (70), Expect = 0.30
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 23/124 (18%)
Frame = +1
Query: 367 DDWVSAVQAHSSWILSGSYDNS------------LHIWSTK-GQHKLAIPGHTSPVKAVS 507
D V+ V SS ILS YD+S +IW + G+ + GHT ++++
Sbjct: 970 DMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIR 1029
Query: 508 WVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCM----------ITYRGHDKGIECLSV 657
V + T ++GS D TA VW+V R S D + + Y DKGI ++
Sbjct: 1030 MV-----EDTLITGSDDWTA--RVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGI--ITG 1080
Query: 658 SADG 669
SADG
Sbjct: 1081 SADG 1084
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 385 VQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 561
+ + + LSGS+D L +W G+ GHT V +V+ F D VS S D+
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVA---FSTDNRQIVSASRDR 127
Query: 562 TAILWVWNVPRNSVDCMITYRGHDKGIECLSVS 660
T + +WN + GH + + C+ S
Sbjct: 128 T--IKLWNTLGECKYTISEADGHKEWVSCVRFS 158
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +1
Query: 385 VQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 561
+ + + LSGS+D L +W G+ GHT V +V+ F D VS S D+
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVA---FSTDNRQIVSASRDR 127
Query: 562 TAILWVWNVPRNSVDCMITYRGHDKGIECLSVS 660
T + +WN + GH + + C+ S
Sbjct: 128 T--IKLWNTLGECKYTISEGDGHKEWVSCVRFS 158
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Frame = +1
Query: 364 HDDWVSAV--QAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQA 534
H + +V A + +G+ ++ +W + + + GH S +V++ F G+
Sbjct: 151 HSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPF-GE-- 207
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADG 669
F SGS D L +W++ + C+ TY+GH +G+ L + DG
Sbjct: 208 FFASGSLDTN--LKIWDIRKKG--CIHTYKGHTRGVNVLRFTPDG 248
Score = 32.3 bits (70), Expect = 0.30
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 403 WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWV 579
WI+SG DN + +W T G+ H +++ + F + +GS D+T W
Sbjct: 250 WIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQS---LDFHPHEFLLATGSADKTVKFW- 305
Query: 580 WNVPRNSVDCMITYRGHDKGIECLSVSADG 669
+ + + + G+ CL+ + DG
Sbjct: 306 ---DLETFELIGSGGTETTGVRCLTFNPDG 332
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWIL--SGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQA 534
H + +V +S +L +G+ ++ +W + + + GH S +V + F G+
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF-GE-- 114
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADG 669
F SGS D L +W++ + C+ TY+GH +G+ L + DG
Sbjct: 115 FFASGSLDTN--LKIWDIRKKG--CIHTYKGHTRGVNVLRFTPDG 155
Score = 33.9 bits (74), Expect = 0.100
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 403 WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWV 579
W++SG DN + +W T G+ H +++ + F + +GS D+T W
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQS---LDFHPHEFLLATGSADRTVKFW- 212
Query: 580 WNVPRNSVDCMITYRGHDKGIECLSVSADG 669
+ + + + G+ CLS + DG
Sbjct: 213 ---DLETFELIGSGGPETAGVRCLSFNPDG 239
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWIL--SGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQA 534
H + +V +S +L +G+ ++ +W + + + GH S +V + F G+
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF-GE-- 114
Query: 535 TFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADG 669
F SGS D L +W++ + C+ TY+GH +G+ L + DG
Sbjct: 115 FFASGSLDTN--LKIWDIRKKG--CIHTYKGHTRGVNVLRFTPDG 155
Score = 33.9 bits (74), Expect = 0.100
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 403 WILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWV 579
W++SG DN + +W T G+ H +++ + F + +GS D+T W
Sbjct: 157 WVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQS---LDFHPHEFLLATGSADRTVKFW- 212
Query: 580 WNVPRNSVDCMITYRGHDKGIECLSVSADG 669
+ + + + G+ CLS + DG
Sbjct: 213 ---DLETFELIGSGGPETAGVRCLSFNPDG 239
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKLAI---PGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+ + S+D + IW G I GH + VK+VSW + + S D++ +W
Sbjct: 89 LATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSW---NASGSCLATCSRDKS--VW 143
Query: 577 VWNV-PRNSVDCMITYRGHDKGIE 645
+W V N DC GH + ++
Sbjct: 144 IWEVLEGNEYDCAAVLTGHTQDVK 167
Score = 31.1 bits (67), Expect = 0.70
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Frame = +1
Query: 364 HDDWVSAVQ--AHSSWILSGSYDNSLHIWST-KGQH---KLAIPGHTSPVKAVSWVSFQG 525
H++ V +V A S + + S D S+ IW +G + GHT VK V W
Sbjct: 117 HENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQW---HP 173
Query: 526 DQATFVSGSHDQTAILWVWNVPRNSVDCMITY----RGHDKGIECLSVSADGN 672
S S+D T +W C+ T GH + +S +A G+
Sbjct: 174 TMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGD 226
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHK------LAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTA 567
+ S S DN++ IW + + HT V++ +W S G + S D T
Sbjct: 42 LASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAW-SPSGQ--LLATASFDGTT 98
Query: 568 ILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
+W + +C+ T GH+ ++ +S +A G+
Sbjct: 99 --GIWKNYGSEFECISTLEGHENEVKSVSWNASGS 131
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Frame = +1
Query: 406 ILSGSYDNSLHIW---------STKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 558
+ SG DN +HIW +T+ H+L HTS VKA++W FQ + G D
Sbjct: 281 LASGGNDNVVHIWDRSVASSNSTTQWLHRLE--EHTSAVKALAWCPFQANLLATGGGGGD 338
Query: 559 QTAILW 576
+T W
Sbjct: 339 RTIKFW 344
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 9/66 (13%)
Frame = +1
Query: 406 ILSGSYDNSLHIW---------STKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHD 558
+ SG DN +HIW +T+ H+L HTS VKA++W FQ + G D
Sbjct: 271 LASGGNDNVVHIWDRSVASSNSTTQWLHRLE--EHTSAVKALAWCPFQANLLATGGGGGD 328
Query: 559 QTAILW 576
+T W
Sbjct: 329 RTIKFW 334
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 403 WILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
++LS S D ++ +WSTK + + GH PV + F G F S SHD+TA +W
Sbjct: 432 FVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPF-GHY--FASCSHDRTARIW 487
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSFQGDQATFVSGSHD 558
A+ ++ SG D ++ +W + + GH S V ++S + G+ + SGS D
Sbjct: 548 AMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLS---YSGEGSLLASGSAD 604
Query: 559 QTAILW 576
T LW
Sbjct: 605 CTVKLW 610
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHK-LAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+ SG DN L +W+ Q L + HT+ VKA++W Q G+ D+ W
Sbjct: 313 LASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFW 370
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +1
Query: 361 MHDDWVSAVQ-----AHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQG 525
+H D VSAV ++GSYD S+ I+ G H I HT ++ V V +
Sbjct: 274 VHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIY-HTKRMQRVFCVKYSC 332
Query: 526 DQATFVSGSHDQTAILW 576
D +SGS D LW
Sbjct: 333 DATYVISGSDDTNLRLW 349
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+ +GS D IW+ G+ + H P+ ++ W + +GD ++GS D+TA++W
Sbjct: 339 LATGSCDGQARIWTLNGELISTLSKHKGPIFSLKW-NKKGDY--LLTGSVDRTAVVW 392
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTK 453
A + +I SGS D S+HIWS K
Sbjct: 548 AFSPNGEYIASGSLDKSIHIWSIK 571
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
+ S S D + +W G K+ + HT V+AV+W + + +SGS DQT +L
Sbjct: 249 LASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPE--VLLSGSFDQTVVLKDG 306
Query: 583 NVPRNS 600
P +S
Sbjct: 307 RQPSHS 312
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 409 LSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
LS S+D S+ +W+ G+ L + GHTS V +V S VS S D+ A +W
Sbjct: 205 LSASHDGSIRLWALSGEVLLEMVGHTSLVYSVDAHS----SGLIVSASEDRHAKIW 256
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 379 SAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSH 555
+ ++ S ++SGS D SL +W KG+ L + GHT V+ ++ + G F+S SH
Sbjct: 156 AVIRLPSGELVSGSSDASLKLW--KGKTSLQTLSGHTDTVRGLAVMPDLG----FLSASH 209
Query: 556 DQTAILW 576
D + LW
Sbjct: 210 DGSIRLW 216
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +1
Query: 409 LSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
LS S+D S+ +W+ G+ L + GHTS V +V S VS S D+ A +W
Sbjct: 205 LSASHDGSIRLWALSGEVLLEMVGHTSLVYSVDAHS----SGLIVSASEDRHAKIW 256
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 379 SAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSH 555
+ ++ S ++SGS D SL +W KG+ L + GHT V+ ++ + G F+S SH
Sbjct: 156 AVIRLPSGELVSGSSDASLKLW--KGKTSLQTLSGHTDTVRGLAVMPDLG----FLSASH 209
Query: 556 DQTAILW 576
D + LW
Sbjct: 210 DGSIRLW 216
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTK---GQHKLA--IPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAI 570
ILSGS DN +W + G+ K A + GH ++ V+++ +GD F+S DQT
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGH---LEGVTFIDSRGDGRYFISNGKDQTIK 343
Query: 571 LW 576
LW
Sbjct: 344 LW 345
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 36.7 bits (81), Expect = 0.014
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +1
Query: 385 VQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 561
+ + + LSGS+D L +W G GHT V +V+ F D VS S D+
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVA---FSLDNRQIVSASRDR 127
Query: 562 TAILW 576
T LW
Sbjct: 128 TIKLW 132
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
+ S S D + +W G K+ + HT V+AV+W + + +SGS DQT ++
Sbjct: 281 LASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPE--VLLSGSFDQTVVMKDG 338
Query: 583 NVPRNS 600
P +S
Sbjct: 339 RQPSHS 344
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHK--LAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
I SGS+D + +W G K + + GH + + + W S D + VS S D+T W
Sbjct: 68 IASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTS---DGSQIVSASPDKTVRAW 123
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPV 495
+ +GS D +HIW T + + +PGHT V
Sbjct: 287 VTAGSSDRMVHIWDTTSRRTIYKLPGHTGSV 317
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +1
Query: 466 LAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDC--MITYRGHDKG 639
+ + GH S AV + F SGSHD+ LW R DC + +GH
Sbjct: 47 MLLSGHPS---AVYTMKFNPAGTLIASGSHDREIFLW-----RVHGDCKNFMVLKGHKNA 98
Query: 640 IECLSVSADGN 672
I L ++DG+
Sbjct: 99 ILDLHWTSDGS 109
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +1
Query: 406 ILSGSYDNSLHIWS-TKGQHKL----AIPGHTSPVKAVSWVSFQG-DQATFVSGSHDQTA 567
+ SG DN++ +W G K+ A+ HT V+ V+W G ++T SGS D
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKV 238
Query: 568 ILW 576
I+W
Sbjct: 239 IIW 241
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
++I SGS D+ ++IW + G+ + +PGH V VSW + S S D T +W
Sbjct: 502 AFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSW--SPTNLHMLASASDDGTIRIW 559
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTKGQHKLAIPGHTSPV-----KAVSWVSFQGDQATFVSGSHDQT 564
S + + D+ L ++S K IP T+ + V ++ F + S S DQT
Sbjct: 238 SCVFHNTLDSDLSLYSDHQCGKHQIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQT 297
Query: 565 AILWVWNVPRNSVDCMITYRGHDKGIECLSVSAD 666
AI+W + + T GH K + + S D
Sbjct: 298 AIIWEISAD-GHISLKHTLVGHHKPVIAILWSPD 330
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 379 SAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSW 510
S + ++ +GS D S+H+WS +KG + TSP+ SW
Sbjct: 451 SCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSW 495
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 35.5 bits (78), Expect = 0.033
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTKGQHKLA--IPGHTSPVKAVSWVSFQGDQATFVSGSH 555
AV++ SS + GS D ++ W + + GH S AV + G+ +SGS
Sbjct: 331 AVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKS---AVLCLGIAGN--LLLSGSA 385
Query: 556 DQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSAD 666
D+ +W + S C+ GH ++CL+V +
Sbjct: 386 DKNICVWRRDPSDKSHQCLSVLTGHMGPVKCLAVEEE 422
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 34.7 bits (76), Expect = 0.057
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
I+SG D ++ IW + G+ +A++ + D + F++GSHD+TA LW
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLW 247
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 34.7 bits (76), Expect = 0.057
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTKGQHKLA--IPGHTSPVKAVSWVSFQGDQATFVSGSH 555
AV + + + GS D ++ W + Q + GH AV + G + SGS
Sbjct: 302 AVSKNGAAVYFGSSDGLVNFWEREKQLNYGGILKGHKL---AVLCLEVAG--SLVFSGSA 356
Query: 556 DQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSAD 666
D+T + VW N C+ GH ++CL+V AD
Sbjct: 357 DKT--ICVWKRDGNIHTCLSVLTGHTGPVKCLAVEAD 391
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Frame = +1
Query: 376 VSAVQAHSSWILSGSYDNSLHIWSTKGQ-HKL--AIPGHTSPVKAVS-----WVSFQGDQ 531
V ++ S + SGS D ++ +W G H + GHT PVK ++ S + D+
Sbjct: 341 VLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDK 400
Query: 532 ATFV-SGSHDQTAILWVWNVPRNSVD 606
V SGS D++ + VW V + +D
Sbjct: 401 KWIVYSGSLDKS--VKVWGVSESFID 424
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 34.7 bits (76), Expect = 0.057
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +1
Query: 478 GHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 657
GHT V A+ + QG +S D + +W+V NS CM TY GH K + +
Sbjct: 280 GHTKGVSAIRFFPKQGH--LLLSAGMD--CKVKIWDV-YNSGKCMRTYMGHAKAVRDICF 334
Query: 658 SADGN 672
S DG+
Sbjct: 335 SNDGS 339
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 361 MHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL----AIPGHTSPVKAVSWVSFQGD 528
MH +V + +W+ + S DN + I+ST+ + +L GH A V+F D
Sbjct: 455 MHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ-VNFSPD 513
Query: 529 QATFVSGSHDQTAILWVW 582
+SG + W W
Sbjct: 514 GRFVMSGDGEGKCWFWDW 531
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 34.3 bits (75), Expect = 0.075
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +1
Query: 322 LERFPAPTPQDCLMHDDWV-SAVQAHSSWILSGSYDNSLHIWS-TKGQ-HKLAIPGHTSP 492
L++ P + C + +V + + ++LSGS D + +IW K Q + + GH
Sbjct: 324 LDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFE 383
Query: 493 VKAVSWVSFQ-GDQATFVSGSHDQTAILWVWNVPRN 597
V AV W + G AT S D T L WN+ N
Sbjct: 384 VTAVDWSPSEIGKVAT---ASDDFTVRL--WNIENN 414
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.075
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +1
Query: 406 ILSGSYDNSLHIWS-TKGQHKL----AIPGHTSPVKAVSWVSFQG-DQATFVSGSHDQTA 567
+ SG D+++ +W + G K+ A+ HT V+ V+W G ++T SGS D
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKV 238
Query: 568 ILW 576
I+W
Sbjct: 239 IIW 241
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 34.3 bits (75), Expect = 0.075
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +1
Query: 412 SGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVP 591
+G D L IW + I H V +++W+ G +G + T +W +
Sbjct: 304 TGGMDKKLIIWDLQHSTPRFICEHEEGVTSLTWI---GTSKYLATGCANGTVSIWDSLLG 360
Query: 592 RNSVDCMITYRGHDKGIECLSVSAD 666
+C+ TY GH ++ +SVS +
Sbjct: 361 ----NCVHTYHGHQDAVQAISVSTN 381
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 385 VQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 561
+ ++SS +SGS D S+HI + G+ ++ HT V+ V + +G D+
Sbjct: 250 INSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDK 309
Query: 562 TAILW 576
I+W
Sbjct: 310 KLIIW 314
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 33.9 bits (74), Expect = 0.100
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+LS S DNS+ +W + L I H + V +V + D F+SGS D +W
Sbjct: 370 LLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDH--FISGSIDGKVRIW 424
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 33.9 bits (74), Expect = 0.100
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+LS S DNS+ +W + L I H + V +V + D F+SGS D +W
Sbjct: 370 LLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQFNPVDDDH--FISGSIDGKVRIW 424
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 33.9 bits (74), Expect = 0.100
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Frame = +1
Query: 199 PSFEKAVIFDFLVCGELLCASLAEHLQEKGVSTE-DTLEVEYLERFPA-PTPQDCLM--- 363
P++E A+ F C +L L +++K ++ + ++L+ + R P P C +
Sbjct: 364 PAYENALKESFERCLDLY---LCPRVRKKRINIDPESLKPKLPSRKDLRPYPNSCYLEYK 420
Query: 364 -HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 510
H V+++ SS WI SGS D S+ +W + L + + V+W
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAW 472
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 376 VSAVQAHSSWILSGSYDNSLHIWSTKGQHKL--AIPGHTSPVKAVSWVSFQGDQATFVSG 549
VS ++ +W +SGS D++ +W T+ + GH V V F D F +G
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNT---VKFFPDGYRFGTG 266
Query: 550 SHDQTAILW 576
S D T L+
Sbjct: 267 SDDGTCRLY 275
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 376 VSAVQAHSSWILSGSYDNSLHIWSTKGQHKL--AIPGHTSPVKAVSWVSFQGDQATFVSG 549
VS ++ +W +SGS D++ +W T+ + GH V V F D F +G
Sbjct: 148 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNT---VKFFPDGYRFGTG 204
Query: 550 SHDQTAILW 576
S D T L+
Sbjct: 205 SDDGTCRLY 213
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 412 SGSYDNSLHIWSTKGQHKLAI-----PGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+GS D + ++ + H+L + G PV ++++ S G + F + + T +W
Sbjct: 203 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAF-SVSG-RLLFAGYASNNTCYVW 260
Query: 577 VWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
+ +D + H I CL +SADG+
Sbjct: 261 DTLLGEVVLDLGLQQDSHRNRISCLGLSADGS 292
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 376 VSAVQAHSSWILSGSYDNSLHIWSTKGQHKL--AIPGHTSPVKAVSWVSFQGDQATFVSG 549
VS ++ +W +SGS D++ +W T+ + GH V V F D F +G
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNT---VKFFPDGYRFGTG 266
Query: 550 SHDQTAILW 576
S D T L+
Sbjct: 267 SDDGTCRLY 275
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 412 SGSYDNSLHIWSTKGQHKLAI-----PGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+GS D + ++ + H+L + G PV ++++ S G + F + + T +W
Sbjct: 265 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAF-SVSG-RLLFAGYASNNTCYVW 322
Query: 577 VWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
+ +D + H I CL +SADG+
Sbjct: 323 DTLLGEVVLDLGLQQDSHRNRISCLGLSADGS 354
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Frame = +1
Query: 376 VSAVQAHSSWILSGSYDNSLHIWSTKGQ-HKLA--IPGHTSPVKAVSWVSFQGDQ----- 531
V + A + SG+ D + +W +G+ H + GHT PVK ++ V G +
Sbjct: 269 VLCIAAAGKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGG 328
Query: 532 ---ATFVSGSHDQTAILWVWNVPRN 597
SGS D++ + VW VPR+
Sbjct: 329 DGRLVLYSGSLDKS--VKVWRVPRH 351
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIW--STKGQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
HDD V++V S + +GS D ++ +W +G+ T + + +
Sbjct: 176 HDDAVNSVTTAESLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMA 235
Query: 538 FVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVS 660
SGS D W + C + ++ H + C++ +
Sbjct: 236 VYSGSSDGAVNFWEMGDKKLLKHCEV-FKKHRLAVLCIAAA 275
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/103 (22%), Positives = 40/103 (38%)
Frame = +1
Query: 349 QDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGD 528
Q L + V+A+ + SGS D +++ W G KL ++ +
Sbjct: 217 QTLLKQESAVTALVTSHMAVYSGSSDGAVNFWE-MGDKKLLKHCEVFKKHRLAVLCIAAA 275
Query: 529 QATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 657
SG+ D+ + VW C+ GH ++CL+V
Sbjct: 276 GKLLFSGAADKK--ICVWRREGKVHTCVSVLTGHTGPVKCLAV 316
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Frame = +1
Query: 415 GSYDNSLHIW---STKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWN 585
GS+D + +W +T + + GH S VK+VSW + + D++ +W+W
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSW---NASGSLLATCGRDKS--VWIWE 120
Query: 586 V-PR--NSVDCMITYRGHDKGIE 645
+ P + D + GH + ++
Sbjct: 121 IQPEEDDEFDTIAVLTGHSEDVK 143
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 31.9 bits (69), Expect = 0.40
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Frame = +1
Query: 364 HDDWVSAVQ-AHSSWILSGSYDNSLHIW---------STKGQHKLA--IPGHTSPVKAVS 507
HDD ++AV + + I +GS D + +W K +H L + H S + A++
Sbjct: 207 HDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALA 266
Query: 508 WVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSAD 666
G + SG D + ++W + + + RGH + + CL+V +D
Sbjct: 267 LSGTNG--SLLHSGGSDGSILVWERD-DGGDIVVVGMLRGHTESVLCLAVVSD 316
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKG-QHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
+ SG DN L +W+ Q L HT+ VKA++W SG + W
Sbjct: 350 LASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHV--HGLLASGGGTADRCIRFW 407
Query: 583 NVPRNS 600
N N+
Sbjct: 408 NTTTNT 413
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 31.9 bits (69), Expect = 0.40
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Frame = +1
Query: 289 VSTEDTLEVEYLERFPAPTPQDCLMHDDWV---SAVQAHSSWILSGSYDNSLHIWSTK-- 453
VS D V+Y + A D L H D+V + S +++GSYD+++ +W +
Sbjct: 152 VSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVH 211
Query: 454 GQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
+ +A H PV+ V ++ G AT
Sbjct: 212 TSNWIAEINHGLPVEDVVYLPSGGLIAT 239
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 415 GSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
G+++NS H+ S T G+ +I H VS V+ D +GS+D T ++W
Sbjct: 1022 GNWENSFHVISLTDGRVVQSIRHHKD---VVSCVAVTADSTILATGSYDTTVMVW 1073
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 31.5 bits (68), Expect = 0.53
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 403 WILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
++ + SYD ++IWS + + ++ GH S V ++ D + + SHD+T LW
Sbjct: 480 FLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLD---ITADSSCIATVSHDRTIKLW 535
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 31.1 bits (67), Expect = 0.70
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Frame = +1
Query: 364 HDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQAT 537
HD V+AV+ + SS ++S +D SL +W + H + P + +S +
Sbjct: 101 HDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS-HSVE-PVQIIDTFLDTVMSVVLTKTE 158
Query: 538 FVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
+ GS D T + + R D + + + C+S+S DGN
Sbjct: 159 IIGGSVDGTVRTFDMRIGREMSDNL------GQPVNCISISNDGN 197
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +1
Query: 364 HDDWVSAVQ---AHSSWILSGSYDNSLHIWSTKGQH 462
H+D+V+ +Q ++ LSGS D + IWS + +H
Sbjct: 545 HNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRH 580
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +1
Query: 451 KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGH 630
K H GH V +V+W S + SGS DQTA +W +S + +GH
Sbjct: 9 KSLHSREYQGHKKKVHSVAWNS---NGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGH 65
Query: 631 DKGIECL 651
++ L
Sbjct: 66 TDSVDQL 72
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 382 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 561
A ++++ G +++W KL H ++V+ + F GD + VSGS D
Sbjct: 85 AANNEGTYLVGGGISGDIYLWEV-ATGKLLKKWH-GHYRSVTCLVFSGDDSLLVSGSQDG 142
Query: 562 TAILW 576
+ +W
Sbjct: 143 SIRVW 147
>At3g22740.1 68416.m02868 homocysteine S-methyltransferase 3 (HMT-3)
identical to homocysteine S-methyltransferase HMT-3
[Arabidopsis thaliana] GI:9966515; similar to
homocysteine S-methyltransferase AtHMT-2 (GI:6685163)
[Arabidopsis thaliana]; similar to selenocysteine
methyltransferase GB:P56707 from [Astragalus bisulcatus]
Length = 347
Score = 30.7 bits (66), Expect = 0.93
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 67 AQLQVRFITKQEQYAVPDSPYAIQCNVHPADLN-TLINAILKETSPSFEKAVIFDFLVCG 243
+ L F+ K YAV D +A + H AD+N L +A TSP V D+L G
Sbjct: 10 SSLMTDFLEKCGGYAVVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLESG 69
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +1
Query: 268 EHLQEKGVSTEDTLEVEYLERFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWS 447
E +E G E+ ++Y +R P L+ +D S + + I G++D ++ I
Sbjct: 29 EEEEENGDEAEEEPRLKY-QRMGGNVP--ALLSNDAASCIAVAARMIALGTHDGTVRILD 85
Query: 448 TKGQHKLAIPGHTSPVKAVSW 510
G HT+PV +++
Sbjct: 86 LLGNQVKEFRAHTAPVNDINF 106
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSW 510
++++SGS DNS IW KG + H V+ V+W
Sbjct: 66 AYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 103
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSW 510
++++SGS DNS IW KG + H V+ V+W
Sbjct: 125 AYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVSW 510
++++SGS DNS IW KG + H V+ V+W
Sbjct: 125 AYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 502 VSWVSFQGDQATFVSGSHDQTAILWVW 582
V+ VSF D +SGS D+ ILW W
Sbjct: 58 VNTVSFNADGDILLSGSDDRQVILWDW 84
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIW 444
H D +S + H+ I SGS+D +L +W
Sbjct: 173 HADSISCLAVHAGIIYSGSWDKTLKVW 199
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
+++LS S D ++ +W L + H S V +V + ++ F+SGS D +W
Sbjct: 340 NYLLSASMDKTVRLWKVGSNDCLGVFAHNSYVTSVQFNPV--NENYFMSGSIDGKVRIW 396
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Frame = +1
Query: 352 DCL---MHDDWVSAVQ---AHSSWILSGSYDNSLHIWSTKG 456
DCL H+ +V++VQ + ++ +SGS D + IW+ G
Sbjct: 360 DCLGVFAHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISG 400
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 469 AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
++ GH S V V++ FQ +SG +D+T +W
Sbjct: 243 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIW 278
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 469 AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
++ GH S V V++ FQ +SG +D+T +W
Sbjct: 269 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIW 304
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 502 VSWVSFQGDQATFVSGSHDQTAILWVWNV 588
V+ VSF + +SGS D+ +LW W +
Sbjct: 62 VNTVSFNAEGDVLISGSDDRRVVLWDWQL 90
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
S + SGS DN + +W G+ L + GH V V G + VS S D+ L
Sbjct: 119 SMLASGSKDNDIILWDVVGESGLFRLRGHRDQV--TDLVFLDGGK-KLVSSSKDK--FLR 173
Query: 577 VWNVPRNSVDCMITYRGHDKGIECLSVSAD 666
VW++ + CM GH E SV D
Sbjct: 174 VWDL--ETQHCMQIVSGHHS--EVWSVDTD 199
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +1
Query: 385 VQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 561
+ + I++GS D +L IW G +I H V V +V + T S +
Sbjct: 590 ISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFV-----RNTHYLFSIGK 644
Query: 562 TAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGN 672
++ W+ + + ++T GH I CL++S G+
Sbjct: 645 DRLVKYWDADK--FEHLLTLEGHHAEIWCLAISNRGD 679
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = +1
Query: 406 ILSGSYDNSLHIWS----TKGQHKLAIPGH--TSPVKAVSWVSFQGDQATFVSGSHDQTA 567
+ SG+ D ++ IW +K H L G S + ++SW +G Q S SH+ T
Sbjct: 131 LASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSWN--KGFQHVLASTSHNGTT 188
Query: 568 ILWVWNVPRNSVDCMITYR 624
++W N + D T R
Sbjct: 189 VIWDVNNEKIITDLKTTVR 207
>At3g63250.1 68416.m07107 homocysteine S-methyltransferase 2 (HMT-2)
99.7% identical to homocysteine S-methyltransferase
AtHMT-2 (GI:6685163) [Arabidopsis thaliana]
Length = 333
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +1
Query: 85 FITKQEQYAVPDSPYAIQCNVHPADLN-TLINAILKETSPSFEKAVIFDFLVCGELLCAS 261
F+ + YAV D A + H ADLN L +A TSP V D+L G + +S
Sbjct: 12 FLKQTGGYAVIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADIISS 71
Query: 262 LA-----EHLQEKGVSTEDT 306
+ + + KG S E++
Sbjct: 72 ASYQATIQGFEAKGFSREES 91
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWSTKG---QHKLAIPGHTSPV-----KAVSWVSFQGDQATFVSGSH 555
S+ +SGS D +L +WS G + I T V K ++ V+ + + +GS
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 556 DQTAILWVWNVPRNSVDCMITYRGHDKGI 642
D+TA +W +P + ++T +GH + I
Sbjct: 520 DRTAS--IWRLP--DLVHVVTLKGHKRRI 544
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Frame = +1
Query: 376 VSAVQAHSSWILSGSYDNSLHIW--STKGQHKL--AIPGHTSPVKAVSWVS-------FQ 522
V + A S +LSG D ++ +W + G H + H PVK ++ V +
Sbjct: 384 VLCLAAAGSLVLSGGADKNICVWRRNGDGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREK 443
Query: 523 GDQATFV-SGSHDQTAILW 576
GDQ V SGS D++ +W
Sbjct: 444 GDQKWIVYSGSLDKSVKVW 462
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
I+SG D + IW + G+ K ++ + D + F++GS D+TA LW
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +1
Query: 466 LAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIE 645
+ + GH P+ + + + +GD S + D T LW ++ + + TYRGH+ +
Sbjct: 4 ILMKGHERPLTFLRY-NREGD--LLFSCAKDHTPTLWF----ADNGERLGTYRGHNGAVW 56
Query: 646 CLSVSADGN 672
C VS D +
Sbjct: 57 CCDVSRDSS 65
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
I+SG D + IW + G+ K ++ + D + F++GS D+TA LW
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +1
Query: 466 LAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIE 645
+ + GH P+ + + + +GD S + D T LW ++ + + TYRGH+ +
Sbjct: 4 ILMKGHERPLTFLRY-NREGD--LLFSCAKDHTPTLWF----ADNGERLGTYRGHNGAVW 56
Query: 646 CLSVSADGN 672
C VS D +
Sbjct: 57 CCDVSRDSS 65
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILW 576
I+SG D + IW + G+ K ++ + D + F++GS D+TA LW
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLW 220
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +1
Query: 466 LAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRNSVDCMITYRGHDKGIE 645
+ + GH P+ + + + +GD S + D T LW ++ + + TYRGH+ +
Sbjct: 4 ILMKGHERPLTFLRY-NREGD--LLFSCAKDHTPTLWF----ADNGERLGTYRGHNGAVW 56
Query: 646 CLSVSADGN 672
C VS D +
Sbjct: 57 CCDVSRDSS 65
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 29.1 bits (62), Expect = 2.8
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +1
Query: 376 VSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAIPGHTS-PVKAVSWVSFQGDQATFVS 546
V +V H + WIL+ Y +L IW+ + Q + T PV++ +++ + V+
Sbjct: 18 VKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIA---RKQWVVA 74
Query: 547 GSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 657
G+ D + V+N N++D + + H I C++V
Sbjct: 75 GADDM--FIRVYNY--NTMDKIKVFEAHADYIRCVAV 107
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTKG--------QHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQ 561
+ SG DN +HIW + Q HT+ V+A++W FQ G D
Sbjct: 233 LASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDG 292
Query: 562 TAILW 576
W
Sbjct: 293 KIKFW 297
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Frame = +1
Query: 412 SGSYDNSLHIW-----STKGQHKLA--IPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAI 570
SG DN +HIW S+K + HT+ V+A++W FQ G D
Sbjct: 269 SGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIK 328
Query: 571 LW 576
W
Sbjct: 329 FW 330
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/97 (21%), Positives = 41/97 (42%)
Frame = +1
Query: 376 VSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSH 555
V + + W+L G N + W+ + L++ G V ++ G F +G+
Sbjct: 188 VGCIISEGPWLLVGM-PNLVKAWNIQNNADLSLNGPVGQVYSL----VVGTDLLF-AGTQ 241
Query: 556 DQTAILWVWNVPRNSVDCMITYRGHDKGIECLSVSAD 666
D + ++W +N + D + GH + L V A+
Sbjct: 242 DGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGAN 278
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 400 SWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQ-GDQATFVSGSHDQTAIL 573
+++ S YD + IW GQ +T K V F D FVSGS D + L
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQ---GFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKL 835
Query: 574 WVWNVPRN 597
W N R+
Sbjct: 836 WSINEKRS 843
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 28.7 bits (61), Expect = 3.8
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 6/200 (3%)
Frame = +1
Query: 76 QVRFITKQEQYAVPDSPYAIQCNVHPADLNTLINAILKETSPSFEKAVI-FDFLVCGELL 252
+ R + + + +P +P A+ N A N A+ +E P +K + EL
Sbjct: 124 EARQLLAEVERHIPAAPEAVTANA--ALSNGKRAAVDEELGPDAKKLCPGISAEIITELT 181
Query: 253 CASLAEHLQEKGVSTEDTL-EVEYLERFP--APTPQDCLMHDDWVSAVQAHSSWILS-GS 420
+ A + K TL ++ LERF + P S HS +++ G
Sbjct: 182 DCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGG 241
Query: 421 YDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRN 597
D + ++ GQ + GH+ K V+ V F GD ++ S D+T +W N
Sbjct: 242 VDATAVLFDRPSGQILSTLTGHS---KKVTSVKFVGDSDLVLTASADKTVRIW-RNPGDG 297
Query: 598 SVDCMITYRGHDKGIECLSV 657
+ C T H + ++V
Sbjct: 298 NYACGYTLNDHSAEVRAVTV 317
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 28.7 bits (61), Expect = 3.8
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 6/200 (3%)
Frame = +1
Query: 76 QVRFITKQEQYAVPDSPYAIQCNVHPADLNTLINAILKETSPSFEKAVI-FDFLVCGELL 252
+ R + + + +P +P A+ N A N A+ +E P +K + EL
Sbjct: 124 EARQLLAEVERHIPAAPEAVTANA--ALSNGKRAAVDEELGPDAKKLCPGISAEIITELT 181
Query: 253 CASLAEHLQEKGVSTEDTL-EVEYLERFP--APTPQDCLMHDDWVSAVQAHSSWILS-GS 420
+ A + K TL ++ LERF + P S HS +++ G
Sbjct: 182 DCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGG 241
Query: 421 YDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVWNVPRN 597
D + ++ GQ + GH+ K V+ V F GD ++ S D+T +W N
Sbjct: 242 VDATAVLFDRPSGQILSTLTGHS---KKVTSVKFVGDSDLVLTASADKTVRIW-RNPGDG 297
Query: 598 SVDCMITYRGHDKGIECLSV 657
+ C T H + ++V
Sbjct: 298 NYACGYTLNDHSAEVRAVTV 317
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 7/64 (10%)
Frame = +1
Query: 406 ILSGSYDNSLHIWSTK-------GQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQT 564
+ SG DN +HIW Q HT+ V+A++W FQ G D
Sbjct: 251 LASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGK 310
Query: 565 AILW 576
W
Sbjct: 311 INFW 314
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 358 LMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAI 474
L H DWV + H + + S S + ++IW + LAI
Sbjct: 293 LRHSDWVWGLAPHETTLASTS-GSDVYIWDVSSETPLAI 330
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 376 VSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAIPGHTS-PVKAVSWVSFQGDQATFVS 546
V +V H + WIL+ Y +L IW+ + Q T PV++ +V+ + V+
Sbjct: 18 VKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVA---RKQWVVA 74
Query: 547 GSHDQTAILWVWNVPRNSVDCMITYRGHDKGIECLSV 657
G+ D + V+N N++D + + H I C++V
Sbjct: 75 GADDM--YIRVYNY--NTMDKVKVFEAHSDYIRCVAV 107
>At1g32690.1 68414.m04031 expressed protein similar to hypothetical
protein GB:AAC61817 GI:3668085 from [Arabidopsis
thaliana]
Length = 200
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 278 CKCSAREAQSNSPHTKKSNITAFSNDGEVSFKIA 177
C CS+R A S SP + S+ + G++SF I+
Sbjct: 46 CSCSSRAAVSFSPSSSSSSSSFSIFAGDISFNIS 79
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 364 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSP 492
H VS + + + SGS+D ++ +WS L + G +P
Sbjct: 626 HKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDNSLLTVLGEETP 668
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +1
Query: 370 DWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPG---HTSPVKAVSWVSFQGDQATF 540
DW ++ H + S D ++++W+ K + H +PVK V W S QG +
Sbjct: 167 DWSTS---HVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKW-SKQG--LSL 220
Query: 541 VSGSHDQTAILW 576
+S +D T+ L+
Sbjct: 221 LSCGYDCTSRLF 232
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 403 WILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQGDQATFVSGSHDQTAILWVW 582
++LSGS D +LH W+ + ++A + + VS + + +A FV+ S T W+
Sbjct: 258 YVLSGSGDGTLHAWNIENPSEVA--RWENNIGVVSCLKWAPRRAMFVAASTVLT--FWIP 313
Query: 583 N 585
N
Sbjct: 314 N 314
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 27.9 bits (59), Expect = 6.6
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +1
Query: 349 QDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLA--IPGHTSPVKAVSWVSFQ 522
QDC + AV ++ + GS D +++ W + K + GH AV +
Sbjct: 299 QDCAVT---AIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKL---AVLCLVAA 352
Query: 523 GDQATFVSGSHDQTAILWVWNVPRNSVD--CMITYRGHDKGIECLSVSAD 666
G+ SGS D + VW P + C+ GH ++CL+V D
Sbjct: 353 GN--LMFSGSADLG--IRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERD 398
>At2g02470.1 68415.m00186 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 256
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 349 QDCLMHDDWVSAVQAHS-SWILSGSY 423
+D + DWVS V HS SW+LS ++
Sbjct: 82 RDGMQEKDWVSLVAVHSDSWLLSVAF 107
>At1g23030.1 68414.m02877 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 612
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +1
Query: 151 PADLNTLINAILKETSPSFEKAVIFDFLVCGELLCASLAEHLQ 279
P L + + ++ T ++E+A I ++ CG L C + L+
Sbjct: 248 PVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLE 290
>At1g19485.1 68414.m02427 AT hook motif-containing protein contains
Pfam profile: PF00730 HhH-GPD superfamily base excision
DNA repair protein; contains Pfam PF02178: AT hook
motif; contains Pfam PF00400: WD domain, G-beta repeat
(5 copies); contains Prosite PS00354: HMG-I and HMG-Y
DNA-binding domain (A+T-hook)
Length = 815
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Frame = +1
Query: 403 WILSGSYDNSLHIW---STKGQHK----LAIPGHTSPVKAVSWVSFQGDQ 531
++L+G +D ++ +W +TK L T+P++AV+W + DQ
Sbjct: 451 FLLAGCHDGTVALWKFSTTKSSEDTRPLLFFSADTAPIRAVAWAPGESDQ 500
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 27.5 bits (58), Expect = 8.7
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Frame = +1
Query: 283 KGVSTEDTLEVEYLE-RFPAPTPQDCLMHDDWVSA--VQAHSSWILSGSYDNSLHIWSTK 453
K VS ++++L+ R P T H ++A V H+ I SGS + ++S K
Sbjct: 1241 KIVSASQAGDIQFLDLRRPKETYLTIDAHRGSLTALGVHRHAPIIASGSAKQLIKVFSLK 1300
Query: 454 GQHKLAIPGHTS----PVKAVSWVSFQGDQATFVSGS 552
G+ I HTS + VS ++F Q +G+
Sbjct: 1301 GEQLGIIKYHTSFMGQQIGPVSCLAFHPYQMLLAAGA 1337
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,154,911
Number of Sequences: 28952
Number of extensions: 319046
Number of successful extensions: 1015
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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