Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30639
         (730 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R7T4 Cluster: Tryptophanyl-tRNA synthetase, putative;...    38   0.25 
UniRef50_Q8I2B2 Cluster: Putative uncharacterized protein PFA014...    37   0.44 
UniRef50_A6DCT5 Cluster: Diguanylate cyclase/phosphodiesterase; ...    35   2.3  
UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3; ...    33   7.2  
UniRef50_Q3LWC0 Cluster: Putative uncharacterized protein; n=2; ...    33   9.5  

>UniRef50_Q7R7T4 Cluster: Tryptophanyl-tRNA synthetase, putative;
           n=3; Plasmodium (Vinckeia)|Rep: Tryptophanyl-tRNA
           synthetase, putative - Plasmodium yoelii yoelii
          Length = 507

 Score = 37.9 bits (84), Expect = 0.25
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
 Frame = -1

Query: 391 NRQIIKILGFSTKAIYCIFNICVHIFNDCKTTVRIKNNYKLVQSVYKALTIVYKNSI--- 221
           N++I  +L  +   IY  +   +++F++ K     KN YKL  ++Y  L   YKN I   
Sbjct: 188 NKKIQNVL--NKNQIYKFYANVIYLFSEIKNIKEKKNLYKLYSTIYPCLNYKYKNKISLD 245

Query: 220 ------CKMQVNIYIFI*FILKI---SLRYTYIF 146
                   M V +YIF   I+K      +Y +IF
Sbjct: 246 IFKTPLSYMNVELYIFFEDIIKYLNNEKKYNFIF 279


>UniRef50_Q8I2B2 Cluster: Putative uncharacterized protein PFA0140c;
           n=3; Plasmodium|Rep: Putative uncharacterized protein
           PFA0140c - Plasmodium falciparum (isolate 3D7)
          Length = 563

 Score = 37.1 bits (82), Expect = 0.44
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = -1

Query: 391 NRQIIKILGFSTKAIYCIFNICVHIFNDCKTTVRIKNNYKLVQSVYKALTIVYKN-SICK 215
           N + IK L     A +  FN+    FN+    +R+ ++YK   + YK    +Y    I K
Sbjct: 452 NYEFIKKLHLFLNAPFYFFNM----FNNKTKEIRLVHDYKYTTNFYKIQIYIYPPIQIHK 507

Query: 214 MQVNIYIFI*FILKISLRYTYIFFKLVI 131
             + I +++ FI      Y ++FF + +
Sbjct: 508 ASIVILVYVNFIYYYMYNYPFVFFYIFV 535


>UniRef50_A6DCT5 Cluster: Diguanylate cyclase/phosphodiesterase;
           n=1; Caminibacter mediatlanticus TB-2|Rep: Diguanylate
           cyclase/phosphodiesterase - Caminibacter mediatlanticus
           TB-2
          Length = 610

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
 Frame = -1

Query: 400 LKINRQIIKILGFSTKAIYCIFNICVHIFNDCKTTVRIKNNYKLVQSVYKALTIVY--KN 227
           LK+  + I I+ F+   IY +       FN+    + I+N +     V K L   Y  KN
Sbjct: 8   LKLAIRFIIIILFTFFLIYILMKYFEKEFNNAIVNIEIQNAFNTAYKVEKILNSHYKNKN 67

Query: 226 SICKMQVNIYI-FI*FILKISLRYTYIF 146
            I  + +N  I ++  I KI+ +Y YI+
Sbjct: 68  DILNLLLNKDIKYVFIIKKINGKYKYIY 95


>UniRef50_Q4YBP9 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 358

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = -1

Query: 391 NRQIIKILGFSTKAIYCIFNICVHIFNDCKTTVRIKNNYKLVQSVYKALTIVYKN 227
           N+++ KI+ + T   Y I   C+HIFN     + I  N+ + + +Y     +YKN
Sbjct: 259 NKKLKKIIFYITT--YTILLYCLHIFNTVLHWINIYLNFTMSKKLYLKYKTLYKN 311


>UniRef50_Q3LWC0 Cluster: Putative uncharacterized protein; n=2;
           Eukaryota|Rep: Putative uncharacterized protein -
           Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 784

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 21/69 (30%), Positives = 35/69 (50%)
 Frame = -1

Query: 400 LKINRQIIKILGFSTKAIYCIFNICVHIFNDCKTTVRIKNNYKLVQSVYKALTIVYKNSI 221
           +K N+Q+I+    S ++ +  FN      N  K    IKNNYK +QS +    ++Y+   
Sbjct: 591 MKFNKQLIQ----SKESFF--FNEAFQKTNATKKICSIKNNYKTIQSSFGRYILIYEKRY 644

Query: 220 CKMQVNIYI 194
             +  NI+I
Sbjct: 645 LFVFKNIHI 653


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,915,438
Number of Sequences: 1657284
Number of extensions: 11221233
Number of successful extensions: 23926
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23906
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)