Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30639
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    27   0.21 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    25   0.83 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.5  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
 Frame = -1

Query: 322 HIFNDCKTTVRIKNNYKLVQSVYK-ALTIVYKNSICKMQ-VNIYIFI*FILKISLRYTYI 149
           HIF  C+T + I +N K +   Y  A +   K SI  +  V ++IF  ++L +  +    
Sbjct: 163 HIFTVCRTLIYIDDNVKGLGKQYNIASSKTLKLSINIISLVQLWIFQLYLLILCDQILRE 222

Query: 148 FFKLVI*LSTDPA*ALKSEICTICHL 71
           F ++V+ LS   +  L  + C  C L
Sbjct: 223 FDQIVVILSKVKS-ILNKKCCEKCGL 247


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 16/70 (22%), Positives = 33/70 (47%)
 Frame = -1

Query: 400 LKINRQIIKILGFSTKAIYCIFNICVHIFNDCKTTVRIKNNYKLVQSVYKALTIVYKNSI 221
           L  ++QI+ IL   TK+   I    V  FND    + + N ++        + ++ K ++
Sbjct: 85  LLYSKQIVTILK-KTKSNIFILKESVDTFNDIFGWIILCNIFEAAAKSLIYIDMIIKKNV 143

Query: 220 CKMQVNIYIF 191
            +   +++IF
Sbjct: 144 TQQNSDVFIF 153


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 463 EMRWLHIKCKRIFDISAIC 519
           + ++L IKCKRI++    C
Sbjct: 780 DAKYLEIKCKRIYNEKQCC 798


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 297 VVLQSLKMCTQILKIQYIAFV 359
           +VL +L   +Q++ IQ+ AFV
Sbjct: 168 IVLYTLSKMSQVMLIQFCAFV 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,924
Number of Sequences: 336
Number of extensions: 3660
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)