Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30636
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.7  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.8  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 603 FKNFVSQNLRKLHEKHDFGDKRSQAFS 523
           F NFVSQ+L K    + F  +RS   S
Sbjct: 309 FSNFVSQHLPKFSAANFFDIERSTILS 335


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 424 SWSQTYIATFSVVLAIVLKYGTSLSKFLWS 335
           +W  TY      +L  V+KYG +L  +L S
Sbjct: 99  AWDITYRFYGGFLLCKVVKYGQTLGPYLSS 128


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 126 TFSSAHRLHSPFLSDEENKK 185
           +FSS  R HS  L +E+N+K
Sbjct: 229 SFSSPRRRHSINLLEEDNQK 248


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/47 (21%), Positives = 20/47 (42%)
 Frame = -1

Query: 251  LYCYKNNIIMTVTIRIVAFTINFFVLFVT*KRAVQPMSGTESFTAYY 111
            ++C     +    I + A  ++   +  + K  V+P    E +T YY
Sbjct: 1192 IHCQTEQDVPEAPIAVKALVMSTDSILASWKPPVEPNGIVEYYTVYY 1238


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 376 LWQVLQKMSQYMSGTNF 426
           +W +  K +Q+ S +NF
Sbjct: 57  IWSIFNKWNQFRSYSNF 73


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +3

Query: 36  FLILTVFEFSIELLNYTMSSLPIVSIIRRE-----TFSSAHRLHSPFLSDEE 176
           FLILTV +   E +N  + S+   S  R +     T  +  ++HS  ++  E
Sbjct: 181 FLILTVLKARFEAINNIIDSIRQNSQTRNQAVPTGTIKTLVQMHSNLVTTSE 232


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
 Frame = +3

Query: 36  FLILTVFEFSIELLNYTMSSLPIVSIIRRE-----TFSSAHRLHSPFLSDEE 176
           FLILTV +   E +N  + S+   S  R +     T  +  ++HS  ++  E
Sbjct: 181 FLILTVLKARFEAINNIIDSIRQNSQTRNQAVPTGTIKTLVQMHSNLVTTSE 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,975
Number of Sequences: 336
Number of extensions: 3330
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)