Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30632
(644 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B44B5 Cluster: PREDICTED: similar to NADH-ubiqu... 60 4e-08
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-... 53 5e-06
UniRef50_Q5BXF5 Cluster: SJCHGC06641 protein; n=1; Schistosoma j... 46 8e-04
UniRef50_P28331 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 42 0.017
UniRef50_Q4T4V2 Cluster: Chromosome 3 SCAF9531, whole genome sho... 40 0.068
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L... 38 0.27
UniRef50_Q23KA9 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 36 1.1
UniRef50_Q4UK22 Cluster: NADH-quinone oxidoreductase subunit G; ... 34 2.6
UniRef50_Q9ZCF6 Cluster: NADH-quinone oxidoreductase subunit G; ... 34 3.4
UniRef50_UPI0000DBF3A8 Cluster: UPI0000DBF3A8 related cluster; n... 33 4.5
UniRef50_A5USP2 Cluster: Primosomal protein N'; n=4; Chloroflexa... 33 4.5
UniRef50_A4U449 Cluster: NADH dehydrogenase (Ubiquinone) Fe-S pr... 33 4.5
UniRef50_Q0V3E4 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 33 5.9
UniRef50_Q4S905 Cluster: Chromosome 7 SCAF14703, whole genome sh... 33 7.8
UniRef50_A0EAY1 Cluster: NADH-ubiquinone oxidoreductase 75 kDa s... 33 7.8
>UniRef50_UPI00015B44B5 Cluster: PREDICTED: similar to
NADH-ubiquinone oxidoreductase, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to NADH-ubiquinone
oxidoreductase, partial - Nasonia vitripennis
Length = 92
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +1
Query: 463 LSGKLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQ 576
LS +D+K K L+ +FMTD ISRASPTMAKC+QAV+KQ
Sbjct: 52 LSDSIDIKQKTLDQFFMTDAISRASPTMAKCVQAVLKQ 89
>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
protein; n=25; Arthropoda|Rep: Endonuclease and reverse
transcriptase-like protein - Bombyx mori (Silk moth)
Length = 986
Score = 53.2 bits (122), Expect = 5e-06
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3
Query: 69 FFIRGLWGVLNSRQRLGYAPGIAEIHGRR 155
FF RGLW VL+ RQRLG APGIAE+HGRR
Sbjct: 958 FFKRGLWRVLSGRQRLGSAPGIAEVHGRR 986
>UniRef50_Q5BXF5 Cluster: SJCHGC06641 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06641 protein - Schistosoma
japonicum (Blood fluke)
Length = 253
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +1
Query: 445 QSLQKPLSGKLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQKQS 585
QS Q + + + L L+DY++TD ISRAS TMAKC++AV + +++
Sbjct: 203 QSTQMNIKESIKLSLLTLKDYYVTDCISRASQTMAKCVKAVQEHEKN 249
>UniRef50_P28331 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial precursor; n=111; cellular
organisms|Rep: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial precursor - Homo sapiens (Human)
Length = 727
Score = 41.5 bits (93), Expect = 0.017
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +1
Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQKQS 585
++D++MTD ISRAS TMAKC++AV + Q+
Sbjct: 691 IKDFYMTDSISRASQTMAKCVKAVTEGAQA 720
>UniRef50_Q4T4V2 Cluster: Chromosome 3 SCAF9531, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 3 SCAF9531, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 39.5 bits (88), Expect = 0.068
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +1
Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQK 579
++D++MTD ISRAS TMAKC++A + K
Sbjct: 422 IKDFYMTDSISRASQTMAKCVKAASEGK 449
>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
hornworm)
Length = 248
Score = 37.5 bits (83), Expect = 0.27
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +1
Query: 145 MGDGNNSPSGGSYACLPERAIKKIIS 222
MGDGN+SPSG YA LP RA K+ S
Sbjct: 1 MGDGNHSPSGRPYASLPTRAKMKLTS 26
>UniRef50_Q23KA9 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit, mitochondrial, putative; n=1; Tetrahymena
thermophila SB210|Rep: NADH-ubiquinone oxidoreductase 75
kDa subunit, mitochondrial, putative - Tetrahymena
thermophila SB210
Length = 771
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQKQSPY 591
+++++MTD ISRAS TMAKC A +K S +
Sbjct: 735 IDNFYMTDAISRASVTMAKCSTAFNHEKFSNF 766
>UniRef50_Q4UK22 Cluster: NADH-quinone oxidoreductase subunit G;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase subunit G
- Rickettsia felis (Rickettsia azadi)
Length = 671
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +1
Query: 502 DYFMTDPISRASPTMAKCIQAVIKQKQ 582
+Y+MTD IS+ S TMAKC++A K+ +
Sbjct: 642 NYYMTDVISKNSVTMAKCVEAKEKRNE 668
>UniRef50_Q9ZCF6 Cluster: NADH-quinone oxidoreductase subunit G;
n=7; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit G - Rickettsia prowazekii
Length = 675
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +1
Query: 502 DYFMTDPISRASPTMAKCIQAVIKQKQ 582
+Y+MTD IS+ S TMAKC++A ++K+
Sbjct: 642 NYYMTDVISKNSVTMAKCVEAHEERKR 668
>UniRef50_UPI0000DBF3A8 Cluster: UPI0000DBF3A8 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DBF3A8 UniRef100 entry -
Rattus norvegicus
Length = 1725
Score = 33.5 bits (73), Expect = 4.5
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Frame = +3
Query: 42 IVTISTNNFFFIRGLWGVLNSRQRLGYAPGIAEIHGRR*QLTIRWVVCLFA*KSNKKNYK 221
+ TI+T F + + R+ L G++E+ L+ ++ + S + +
Sbjct: 921 LTTITTTTFMILCASYITHMCREPLALGLGVSELWKEEVHLSRLDIMAM----SFRTQRR 976
Query: 222 PTLLPLLKSKQMRSSSNLRSVSWGSCSMHFCGFK*P-FNLKSPISWSALM*KKTYSGLVS 398
L L K + NLRS CS+H CGF+ P FN P ++TYS V
Sbjct: 977 ARFLLWLSVKNKCVNLNLRSAVRTMCSIHCCGFECPKFNYSPPH-------RRTYSSQV- 1028
Query: 399 GIYNV 413
IYN+
Sbjct: 1029 -IYNL 1032
>UniRef50_A5USP2 Cluster: Primosomal protein N'; n=4;
Chloroflexaceae|Rep: Primosomal protein N' - Roseiflexus
sp. RS-1
Length = 868
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 85 CGECLTVGSGLAMPLALLKSMGDGNNSPSGGSYAC--LPERAIKKIISPHC 231
CG +T S + PL L + GDG + SGG C R + + PHC
Sbjct: 575 CGHAMTCPS-CSSPLTLHQEAGDGQAASSGGMLICHTCNHRELPPALCPHC 624
>UniRef50_A4U449 Cluster: NADH dehydrogenase (Ubiquinone) Fe-S
protein 1, 75kDa isoform; n=1; Magnetospirillum
gryphiswaldense|Rep: NADH dehydrogenase (Ubiquinone)
Fe-S protein 1, 75kDa isoform - Magnetospirillum
gryphiswaldense
Length = 175
Score = 33.5 bits (73), Expect = 4.5
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 496 LEDYFMTDPISRASPTMAKC 555
+++++M DPISRAS TMA+C
Sbjct: 136 IDNFYMVDPISRASKTMAEC 155
>UniRef50_Q0V3E4 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit; n=2; Ascomycota|Rep: NADH-ubiquinone
oxidoreductase 75 kDa subunit - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 692
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQKQSP 588
++++F TD ISR SPTMA+C A K +++P
Sbjct: 638 IKNFFFTDSISRNSPTMARCSAA--KAEKNP 666
>UniRef50_Q4S905 Cluster: Chromosome 7 SCAF14703, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 7
SCAF14703, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 280
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 424 HKNI*ISQSLQKPLSGKLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQKQSPY 591
H +I + L+ ++ L +L QLEDYF+++P+ KC + + P+
Sbjct: 38 HNDIQVPSDLEV-MTSLLQEELAQLEDYFLSEPLPEKGQRQGKCDRGPLPAGPQPF 92
>UniRef50_A0EAY1 Cluster: NADH-ubiquinone oxidoreductase 75 kDa
subunit; n=3; Paramecium tetraurelia|Rep:
NADH-ubiquinone oxidoreductase 75 kDa subunit -
Paramecium tetraurelia
Length = 712
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 445 QSLQKPLSGKLDVKLKQLEDYFMTDPISRASPTMAKCIQAVIKQKQSPY 591
+S ++ +S L + +++MTD ISR S TMAKC A K S +
Sbjct: 661 ESSKQTISATPFKDLIDVSNFYMTDAISRQSVTMAKCSTAFNPHKFSTF 709
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,667,663
Number of Sequences: 1657284
Number of extensions: 15029840
Number of successful extensions: 31852
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31847
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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