Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30632
(644 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37510.2 68418.m04518 NADH-ubiquinone dehydrogenase, mitochon... 30 1.5
At5g37510.1 68418.m04517 NADH-ubiquinone dehydrogenase, mitochon... 30 1.5
At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH) domain... 30 1.5
At5g65010.2 68418.m08178 asparagine synthetase 2 (ASN2) identica... 27 8.1
At5g65010.1 68418.m08177 asparagine synthetase 2 (ASN2) identica... 27 8.1
At3g47340.3 68416.m05147 asparagine synthetase 1 [glutamine-hydr... 27 8.1
At3g47340.2 68416.m05146 asparagine synthetase 1 [glutamine-hydr... 27 8.1
At3g47340.1 68416.m05145 asparagine synthetase 1 [glutamine-hydr... 27 8.1
At1g55325.1 68414.m06320 expressed protein 27 8.1
>At5g37510.2 68418.m04518 NADH-ubiquinone dehydrogenase,
mitochondrial, putative similar to NADH-ubiquinone
oxidoreductase 75 kDa subunit, mitochondrial from
Solanum tuberosum [SP|Q43644]
Length = 748
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +1
Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQ 576
+E+++MT+ I+RAS MA+C ++K+
Sbjct: 719 VENFYMTNSITRASKIMAQCSAVLLKK 745
>At5g37510.1 68418.m04517 NADH-ubiquinone dehydrogenase,
mitochondrial, putative similar to NADH-ubiquinone
oxidoreductase 75 kDa subunit, mitochondrial from
Solanum tuberosum [SP|Q43644]
Length = 745
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = +1
Query: 496 LEDYFMTDPISRASPTMAKCIQAVIKQ 576
+E+++MT+ I+RAS MA+C ++K+
Sbjct: 719 VENFYMTNSITRASKIMAQCSAVLLKK 745
>At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to Chain A,
Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid
Myeloid Leukaemia Protein, Pi(4,5)p2 Complex
(GP:13399999) {Homo sapiens}; supporting cDNA
gi|26451912|dbj|AK118440.1|
Length = 611
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 415 YGWHKNI*ISQSLQKPLSGKLDVKLKQLEDYFMTDPISRASPT 543
YGW KN+ +++S + P K+ K L D F+ D + A+ T
Sbjct: 295 YGWCKNMAVARSSEYPELEKITQKKLDLMDEFIRDKSALAAQT 337
>At5g65010.2 68418.m08178 asparagine synthetase 2 (ASN2) identical
to asparagine synthetase (ASN2) [Arabidopsis thaliana]
GI:3859536
Length = 579
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 489 EATRRLLHDGPDQSGLANYGQMHPSRDKTKTI 584
E +RRL H GPD SGL Y + + ++ I
Sbjct: 23 ELSRRLRHRGPDWSGLHCYEDCYLAHERLAII 54
>At5g65010.1 68418.m08177 asparagine synthetase 2 (ASN2) identical
to asparagine synthetase (ASN2) [Arabidopsis thaliana]
GI:3859536
Length = 578
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 489 EATRRLLHDGPDQSGLANYGQMHPSRDKTKTI 584
E +RRL H GPD SGL Y + + ++ I
Sbjct: 23 ELSRRLRHRGPDWSGLHCYEDCYLAHERLAII 54
>At3g47340.3 68416.m05147 asparagine synthetase 1
[glutamine-hydrolyzing] / glutamine-dependent asparagine
synthetase 1 (ASN1) identical to SP|P49078 Asparagine
synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
(Glutamine- dependent asparagine synthetase)
{Arabidopsis thaliana}
Length = 456
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 489 EATRRLLHDGPDQSGLANYGQMHPSRDKTKTI 584
E +RRL H GPD SGL G + + + I
Sbjct: 23 ELSRRLRHRGPDWSGLYQNGDNYLAHQRLAVI 54
>At3g47340.2 68416.m05146 asparagine synthetase 1
[glutamine-hydrolyzing] / glutamine-dependent asparagine
synthetase 1 (ASN1) identical to SP|P49078 Asparagine
synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
(Glutamine- dependent asparagine synthetase)
{Arabidopsis thaliana}
Length = 512
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 489 EATRRLLHDGPDQSGLANYGQMHPSRDKTKTI 584
E +RRL H GPD SGL G + + + I
Sbjct: 23 ELSRRLRHRGPDWSGLYQNGDNYLAHQRLAVI 54
>At3g47340.1 68416.m05145 asparagine synthetase 1
[glutamine-hydrolyzing] / glutamine-dependent asparagine
synthetase 1 (ASN1) identical to SP|P49078 Asparagine
synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)
(Glutamine- dependent asparagine synthetase)
{Arabidopsis thaliana}
Length = 584
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 489 EATRRLLHDGPDQSGLANYGQMHPSRDKTKTI 584
E +RRL H GPD SGL G + + + I
Sbjct: 23 ELSRRLRHRGPDWSGLYQNGDNYLAHQRLAVI 54
>At1g55325.1 68414.m06320 expressed protein
Length = 1921
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 489 EATRRLLHDGPDQSGLANYGQMHPSRDKTKTIALLI 596
EA L H + L +YGQ P +D IALL+
Sbjct: 874 EAGSSLPHSSFSEDSLLSYGQRQPLQDLLDGIALLV 909
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,179,126
Number of Sequences: 28952
Number of extensions: 336307
Number of successful extensions: 689
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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