Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30626
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 159 1e-39
Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AF016675-5|AAB66134.1| 476|Caenorhabditis elegans Hypothetical ... 30 1.3
Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical p... 28 4.0
U46669-4|AAQ65208.1| 557|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81569-1|CAB04601.2| 151|Caenorhabditis elegans Hypothetical pr... 27 7.0
U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical p... 27 7.0
U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical pr... 27 7.0
U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical pr... 27 7.0
AB079783-1|BAB84821.1| 433|Caenorhabditis elegans endo-beta-N-a... 27 7.0
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 27 9.2
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 159 bits (386), Expect = 1e-39
Identities = 77/185 (41%), Positives = 111/185 (60%), Gaps = 6/185 (3%)
Frame = +1
Query: 25 PDLEKLLERDGYLKPYEREIRRRYACYKDIWDRIESWDGGLEAFTKGYKYYGPQFNQDGS 204
P +++LL+ D YL ++ EI RRY + D RIE GG+E FT YK +G D S
Sbjct: 7 PKIDELLKIDPYLHDFQDEISRRYGVFLDYQRRIEEC-GGMEEFTSSYKQFGLNVQPDNS 65
Query: 205 VTWREWAPGAHSLHLRGEFNGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQII 384
V EWAP A L L G+FN WD ++ + K+E+GKW I +PA DGSC + H+S ++I
Sbjct: 66 VKGLEWAPAAEKLALIGDFNNWDQNANVYKKEEHGKWSITVPAKEDGSCPIPHNSVIKIA 125
Query: 385 VNDN---LYRISPWASYV---KPHEGFTYQHFIYKPEQPYKFKHPKVDKPKSLRIYECHV 546
V+ + +++SPWA++V P E Y + P + Y+ K + +P SLRIYE HV
Sbjct: 126 VSRHGATHFKLSPWATFVTCPNPKETVIYHQNFWNPPEKYQLKEARPARPASLRIYEAHV 185
Query: 547 GIATS 561
GI++S
Sbjct: 186 GISSS 190
>Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical
protein T04A8.7b protein.
Length = 606
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/106 (38%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Frame = +1
Query: 262 NGWDSKSHPFAKKEYGKWEIQIPANPDGSCALKHDSRVQIIVNDN---LYRISPWASYV- 429
+ WD ++ + K+E+GKW I +PA DGSC + H+S ++I V+ + +++SPWA++V
Sbjct: 10 DNWDQNANVYKKEEHGKWSITVPAKEDGSCPIPHNSVIKIAVSRHGATHFKLSPWATFVT 69
Query: 430 --KPHEGFTYQHFIYKPEQPYKFKHPKVDKPKSLRIYECHVGIATS 561
P E Y + P + Y+ K + +P SLRIYE HVGI++S
Sbjct: 70 CPNPKETVIYHQNFWNPPEKYQLKEARPARPASLRIYEAHVGISSS 115
>AF016675-5|AAB66134.1| 476|Caenorhabditis elegans Hypothetical
protein T27B7.2 protein.
Length = 476
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -2
Query: 350 HEPSGFAGI*ISHLPYSFLANGWLFESHPLNSPRRCRLCAPGAHSRH 210
H S + + +L Y F + L + NSP CR+C AH H
Sbjct: 9 HRDSKLSPFSLLYLFYQFPKHSALHKPAMTNSPFSCRICGMKAHGTH 55
>Z66524-8|CAH10782.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 54 RLFEAIRKRN*KEICLLQRHLGPYRIMGRWL-RSIHE 161
+L E+ +K+N CLL+ H+ + +W+ R+IHE
Sbjct: 29 QLKESKKKKNRASRCLLRIHISILNSLSKWIDRNIHE 65
>Z66523-10|CAH04723.1| 753|Caenorhabditis elegans Hypothetical
protein T13H5.1b protein.
Length = 753
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 54 RLFEAIRKRN*KEICLLQRHLGPYRIMGRWL-RSIHE 161
+L E+ +K+N CLL+ H+ + +W+ R+IHE
Sbjct: 29 QLKESKKKKNRASRCLLRIHISILNSLSKWIDRNIHE 65
>U46669-4|AAQ65208.1| 557|Caenorhabditis elegans Hypothetical
protein C41G11.4c protein.
Length = 557
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 118 PKCLCSKHISF*FLFRMASNN-RLFLIISLNLVQALPS 8
P C C+ HI F + +NN F I S +VQ LP+
Sbjct: 511 PVCQCTGHIQCSFKYYFITNNYSSFSIFSYYIVQFLPT 548
>Z81569-1|CAB04601.2| 151|Caenorhabditis elegans Hypothetical
protein K11B4.2 protein.
Length = 151
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 266 DGTRRAIHSLKRSTANGRFKSPQIQMVRVH 355
D TR+A S + ST GR KS RVH
Sbjct: 112 DSTRKATSSAESSTVKGRSKSLHNVATRVH 141
>U13070-10|AAC46644.3| 294|Caenorhabditis elegans Hypothetical
protein F01F1.10a protein.
Length = 294
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -2
Query: 380 IWTRESCFNAHEPSGFAGI*ISHLPYSFLANGWLFESHP 264
+W R H FA + H+ + A GW++E P
Sbjct: 246 VWARGCVGEFHCDQSFALAKLFHMSVALFAPGWIYEKFP 284
>U13070-9|AAU05578.1| 388|Caenorhabditis elegans Hypothetical
protein F01F1.10c protein.
Length = 388
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -2
Query: 380 IWTRESCFNAHEPSGFAGI*ISHLPYSFLANGWLFESHP 264
+W R H FA + H+ + A GW++E P
Sbjct: 201 VWARGCVGEFHCDQSFALAKLFHMSVALFAPGWIYEKFP 239
>U13070-8|AAN84828.1| 433|Caenorhabditis elegans Hypothetical
protein F01F1.10b protein.
Length = 433
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -2
Query: 380 IWTRESCFNAHEPSGFAGI*ISHLPYSFLANGWLFESHP 264
+W R H FA + H+ + A GW++E P
Sbjct: 246 VWARGCVGEFHCDQSFALAKLFHMSVALFAPGWIYEKFP 284
>AB079783-1|BAB84821.1| 433|Caenorhabditis elegans
endo-beta-N-acetylglucosaminidase protein.
Length = 433
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = -2
Query: 380 IWTRESCFNAHEPSGFAGI*ISHLPYSFLANGWLFESHP 264
+W R H FA + H+ + A GW++E P
Sbjct: 246 VWARGCVGEFHCDQSFALAKLFHMSVALFAPGWIYEKFP 284
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical protein
T23F2.2b protein.
Length = 1538
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 382 IVNDNLYRISPWASYVKPHEGFTYQHF-IYKPEQPYKFKHPKVDKPKSLRI 531
I D Y ISP SY HEG +++P++P++ K S+ I
Sbjct: 1232 IEKDLHYPISPSLSYHTAHEGQRKDDIVVHEPQEPFQLGSSKASLSCSIMI 1282
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical protein
T23F2.2a protein.
Length = 1534
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 382 IVNDNLYRISPWASYVKPHEGFTYQHF-IYKPEQPYKFKHPKVDKPKSLRI 531
I D Y ISP SY HEG +++P++P++ K S+ I
Sbjct: 1232 IEKDLHYPISPSLSYHTAHEGQRKDDIVVHEPQEPFQLGSSKASLSCSIMI 1282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,592,127
Number of Sequences: 27780
Number of extensions: 335844
Number of successful extensions: 886
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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