Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30622
         (739 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5FL37 Cluster: Putative uncharacterized protein precur...    34   4.2  
UniRef50_Q54PF4 Cluster: Putative uncharacterized protein; n=1; ...    33   9.7  

>UniRef50_A5FL37 Cluster: Putative uncharacterized protein
           precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
           Putative uncharacterized protein precursor -
           Flavobacterium johnsoniae UW101
          Length = 144

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
 Frame = +3

Query: 57  YAGIKFLISYELTVLYGLISAKSKSNRYTAKNIKHSRLGLFHRETETRLHITPSQIFASI 236
           Y  I  +++  L VL  +I  K+K      K +K  +      E    +  T S +F   
Sbjct: 11  YLFIMLVVTASLCVLAVIIKMKNKKG---PKLLKRDKYNSTMTEKMVEVKKTDSNVF--- 64

Query: 237 *VNITWDAAVRSQSHRQQSLPTKDKDTFTPIFRNINGRFKIILLYVEQKKR--STVAKPN 410
             NI W    R +S +  S   KD+D    ++R+ + +F+ ILL  E K    S +    
Sbjct: 65  --NI-WPYVSRLKSAKILSKKIKDQDLIYKVYRDSSQKFEHILLSTEDKNNFVSIIVNKK 121

Query: 411 RGRALIY 431
           R + + Y
Sbjct: 122 RRKTIGY 128


>UniRef50_Q54PF4 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 64

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 2   FFFFFSTHIYIYIEFVTVLCGNKIFNFI*ANSALWINF 115
           FFFFF   ++I+ EFV ++  N  +NFI A    ++ F
Sbjct: 17  FFFFFFFLLFIFKEFVHLISANTYYNFICAPRQTFLFF 54


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,230,998
Number of Sequences: 1657284
Number of extensions: 13214288
Number of successful extensions: 26173
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26169
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)