Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30620
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 7e-34
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 42 6e-04
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 41 8e-04
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 41 0.001
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 40 0.002
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 38 0.006
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 38 0.010
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 38 0.010
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 37 0.013
SB_732| Best HMM Match : AAA (HMM E-Value=0) 37 0.013
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 36 0.023
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 35 0.052
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 34 0.091
SB_34097| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 34 0.12
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032) 33 0.28
SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 31 1.1
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 30 2.0
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038) 29 2.6
SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24) 29 3.4
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 29 3.4
SB_28334| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_16986| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_10435| Best HMM Match : PRAI (HMM E-Value=1.7) 29 3.4
SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22) 29 3.4
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6) 29 3.4
SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 29 4.5
SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17) 29 4.5
SB_56551| Best HMM Match : Fe_hyd_lg_C (HMM E-Value=0.0049) 28 6.0
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 28 7.9
SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27) 28 7.9
SB_30681| Best HMM Match : An_peroxidase (HMM E-Value=4.3e-29) 28 7.9
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 28 7.9
SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 140 bits (340), Expect = 7e-34
Identities = 81/172 (47%), Positives = 110/172 (63%)
Frame = +2
Query: 125 AHSHIKGLGLDENGVPIQMAAGLVGQESAREAAGIVVDMIRSKKMAGRALLLAGPPGTGK 304
AHSHI+GLGLD+ Q++ G+VGQ +AR AAGI+++MI+ K+AGRA+L+AG PGTGK
Sbjct: 123 AHSHIRGLGLDDALEARQVSQGMVGQVTARRAAGIILEMIKEGKIAGRAVLIAGQPGTGK 182
Query: 305 TAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIRETKEVYEGEVT 484
TAIA+ +AQ LG PF + GSE++S E+ KTE L + + L + ET E+ EGEV
Sbjct: 183 TAIAMGMAQSLGPDTPFTSIAGSEIFSLEMSKTEALTQ---PSESLLVEET-EIIEGEVV 238
Query: 485 ELTPVETENPAGGYGKTVSHVIIGLKTAKGTKQLKLDPTIYESLQKEKVKLG 640
E V+ + P G G V + LKT + L + ESL KEKV+ G
Sbjct: 239 E---VQIDRPTTGTGAKVGK--LTLKTTEMETIYDLGTKMIESLTKEKVQAG 285
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 376
+ +L+GPPGTGKT +A A+A E G VPF + GSE
Sbjct: 82 KGAILSGPPGTGKTLLAKAVAGEAG--VPFLSISGSE 116
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 41.1 bits (92), Expect = 8e-04
Identities = 28/57 (49%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEV-LMENFRRA 433
R +LL GP GTGKT IA A+A E G FC + G EV S +TE L E F A
Sbjct: 291 RGILLYGPSGTGKTMIARAVANETGVHF-FC-INGPEVLSRYYGETEARLREIFTEA 345
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSE 376
+ LL GPPGTGKT +A A+A E VPF M GS+
Sbjct: 159 KGALLVGPPGTGKTLLAKAVATE--ADVPFLSMAGSD 193
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRAIGLRI 448
LLL GPPGTGKT +A +A+E G + F + G E+ S I +E + + F RA +
Sbjct: 704 LLLYGPPGTGKTLLAGVVAKECG--LNFISIKGPELLSKYIGASEQAVRDMFTRA---QS 758
Query: 449 RETKEVYEGEVTELTPVETENPAGGYGKTVSHVIIGLKTAKGTK 580
+ ++ E L P + G + V+ ++ L +G K
Sbjct: 759 AKPCILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLK 802
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 433
+LLAGPPG GKT +A AIA E G + F + G E+ + + ++E + + F+RA
Sbjct: 20 ILLAGPPGCGKTLLAKAIANESG--INFISVKGPELLNMYVGESERAVRQVFQRA 72
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 227 IVVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGT 343
++ D + + R +L+ GPPGTGKT +A A+A E GT
Sbjct: 271 LMPDYFQGIRRPWRGVLMVGPPGTGKTMLAKAVATECGT 309
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGS--EVYSTEIKKTEVLMENFRRAIGLR 445
++L GPPG+GKT +A I + + P + S + + TE++KTE E +R ++
Sbjct: 1252 IILRGPPGSGKTHVAKLIKDKEVSSGAHAPRILSLDDYFLTEVEKTEKDPETGKR---IK 1308
Query: 446 IRETKEVYEGEVTEL 490
+ T+ VYE E+ E+
Sbjct: 1309 KKVTEYVYEPEMEEV 1323
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Frame = +2
Query: 203 ESAREAAGIVVDMIRS----KKMAGR---ALLLAGPPGTGKTAIALAIAQELGTKVPFCP 361
+ A+E VV+ +R+ K++ G+ +LL G PGTGKT +A A+A E G VPF
Sbjct: 137 DEAKEELQEVVEFLRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAG--VPFFF 194
Query: 362 MVGSE 376
GSE
Sbjct: 195 CSGSE 199
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI-KKTEVLMENFRRAIGL 442
+ +LL GPPGTGKT A A+A T F ++GSE+ + + ++ E F A
Sbjct: 119 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSELVQKYVGEGARMVRELFEMA--- 173
Query: 443 RIRETKEVYEGEVTELTPVETENPAGG 523
R ++ V+ E+ + ++ AGG
Sbjct: 174 RTKKACIVFFDEIDAIGGARFDDGAGG 200
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 37.5 bits (83), Expect = 0.010
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELG---TKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 433
R +L GPPGTGKT +A A+A E KV F G++ S + ++E L F +A
Sbjct: 919 RGVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRKGADCLSKWVGESERQLRLLFDQA 978
Query: 434 IGLRIRETKEVYEGEVTELTPVETENPAGGYGKTVSHVI 550
+R ++ E+ L PV + + VS ++
Sbjct: 979 YAMR---PSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLL 1014
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 275 LLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYS-TEIKKTEVLMENFRRAI 436
LL GPPG GKT +A AIA EL ++PF + +E+ S + E + E F A+
Sbjct: 714 LLHGPPGCGKTLLAHAIAGEL--EMPFLKLAATEIVSGVSGESEEKVRELFTSAV 766
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 194 VGQESAREAAGIVVDMIRSKKMAG----RALLLAGPPGTGKTAIALAIAQELGTKVPFCP 361
+ ++ REA + + K G R +LL GPPG GKT +A A+A T F
Sbjct: 171 IQKQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAKAVAHH--TTAAFIR 228
Query: 362 MVGSE 376
+VGSE
Sbjct: 229 VVGSE 233
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +2
Query: 230 VVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTE 406
VVD + K + G +LL GPPGTGKT +A I L T+ P + G EV + + ++E
Sbjct: 173 VVDKMGLKHVKG--ILLFGPPGTGKTLMARQIGTMLNTREPKI-ISGPEVLNKFVGESE 228
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 379
+LLAGPPG GKT +A AIA E G + F + G E+
Sbjct: 20 ILLAGPPGCGKTLLAKAIANESG--INFISVKGPEL 53
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELG 340
+A LL+GPPG GKT A + QELG
Sbjct: 272 KAALLSGPPGVGKTTTATLVCQELG 296
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 35.9 bits (79), Expect = 0.030
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 379
+ +LL GPPGTGKT +A A+A T+ F + GSE+
Sbjct: 212 KGVLLYGPPGTGKTLLARAVAHH--TECTFIRVSGSEL 247
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEV-LMENFRRA 433
+LL GPPGTGKT +A A+A E + F + G E+ + + ++E + E F RA
Sbjct: 847 VLLYGPPGTGKTLMAKAVATE--CSLNFLSVKGPELINMYVGQSEQNVREVFSRA 899
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMV 367
LL GPPGTGKT+ LA+A++L F MV
Sbjct: 13 LLFYGPPGTGKTSTILAVAKQLYPDKQFGSMV 44
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 379
+ ++L G PGTGKT +A A+A + T F +VGSE+
Sbjct: 415 KGVILYGQPGTGKTLLAKAVANQ--TSATFLRVVGSEL 450
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 34.3 bits (75), Expect = 0.091
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 245 RSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEV 379
R+K M R LL GPPGTGKT A ++A+ G + + M G +V
Sbjct: 324 RNKGMY-RNLLFYGPPGTGKTMFAKSLARHSG--MDYAVMTGGDV 365
>SB_34097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 34.3 bits (75), Expect = 0.091
Identities = 30/91 (32%), Positives = 41/91 (45%)
Frame = +2
Query: 269 ALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRI 448
A+L+ GP G GKTA A A ELG K C S+ ++ ++E+ R L
Sbjct: 30 AMLVVGPRGAGKTASIYACAGELGYKDVECDTDASQGVVSD------MLEDTRTESMLAE 83
Query: 449 RETKEVYEGEVTELTPVETENPAGGYGKTVS 541
T E +VT T V+ P +G T S
Sbjct: 84 AMTTESQSLQVTPGTAVDGPLPRVHFGLTES 114
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 33.9 bits (74), Expect = 0.12
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 182 AAGLVGQESAREAAGI-VVDMIR-SKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPF 355
A+G+ + RE AG V+D + S ++ +LL GP G+GKT +A IA+ L
Sbjct: 241 ASGVQSSSTVRETAGSEVLDAEQDSIRLDKSNILLLGPTGSGKTLLAQTIARCLDVPFAI 300
Query: 356 C 358
C
Sbjct: 301 C 301
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 260 AGRALLLAGPPGTGKTAIALAIAQELGTK 346
A R +LL GP GTGKT++A + Q+L K
Sbjct: 1753 AKRPVLLTGPVGTGKTSVAQKVLQKLDPK 1781
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELGTKV 349
+ LL GPPG GKT +A IAQ G V
Sbjct: 381 KVALLCGPPGLGKTTLAHVIAQHAGYNV 408
>SB_8110| Best HMM Match : AAA (HMM E-Value=0.0032)
Length = 1199
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 269 ALLLAGPPGTGKTAIALAIAQELGTKV 349
A+L+ GP G GKTA A A ELG KV
Sbjct: 640 AMLVVGPRGAGKTASIYACAGELGYKV 666
>SB_58530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 31.9 bits (69), Expect = 0.49
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELG-TKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGL 442
R + + G PG+GKT +A +A+ G T + ++ E + EV RAIG+
Sbjct: 105 RVIFVIGGPGSGKTELAKLLAESSGRTHISMGQLLKEEATKDTDRAREV-----ARAIGM 159
Query: 443 RIRETKEVYEGEVTELTPVETENPAGGY 526
+ E G ++E T V E GGY
Sbjct: 160 GTLVSPEHALGILSE-TIVRGEKNLGGY 186
>SB_58982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +2
Query: 278 LAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTE----IKKTEVLMENFRRAI 436
+ GP G+GKTA+ LA+ + L C +V +++++ E + K + L E RA+
Sbjct: 28 IGGPVGSGKTALVLALCKYLRDSCNIC-VVTNDIFTKEDWEFLVKNKALDEKRMRAV 83
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQE 334
+ +L GPPG GKT +A AIA E
Sbjct: 345 KGVLFYGPPGCGKTLLAKAIANE 367
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 260 AGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI 394
+ + +++ GP G GKTA+ +AI +E+ K + G+ + +I
Sbjct: 506 SNQVVMVTGPVGCGKTALLMAILKEIPLKQGSVTLCGTVAFVDQI 550
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 260 AGRALLLAGPPGTGKTAIALAIAQELGTKVP 352
AG +LL GP G+GKT + +A G P
Sbjct: 117 AGSGVLLEGPVGSGKTCLVEHVASMCGRSTP 147
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQELG 340
R +LL G PG GKT++ AIA+ G
Sbjct: 1618 RPILLEGSPGVGKTSLVSAIAKASG 1642
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 275 LLAGPPGTGKTAIALAIAQEL 337
++ GPPGTGKT I L +A+ L
Sbjct: 875 VIQGPPGTGKTYIGLKVAKVL 895
>SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)
Length = 1172
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 269 ALLLAGPPGTGKTAIALAIAQEL-GTKVPFCPMVGSEVYSTEIKKTEVLME 418
++++AGPPGTGK++ A+ + L GS +++ +++K V M+
Sbjct: 1099 SIIVAGPPGTGKSSCISALIETLTECSATKHKNTGSPMHTHKLQKAIVYMD 1149
>SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24)
Length = 569
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 239 MIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTE 391
+I + G L + GP G GK+++ +AI EL + G YS++
Sbjct: 147 LIDNSYFKGELLAIVGPVGAGKSSLLMAILGELPFTEGTITVKGKIAYSSQ 197
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 266 RALLLAGPPGTGKTAIALAIAQEL 337
R LL GPPG GK++ A+A EL
Sbjct: 223 RGYLLYGPPGCGKSSFIQALAGEL 246
>SB_28334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -1
Query: 522 PPAGFSVSTGVNSVTSPSYTSLVSRIRRPIARRKFSINTSVFLISVL*TSLPTI--GQKG 349
PP+ + T N +SP R+P A +K +N +V + ++P + +KG
Sbjct: 35 PPSAIQIPTNGNGRSSPEARVPTIGTRKPAASKKKGVNMAVVISKKKGVTMPVVISKKKG 94
Query: 348 TLVP 337
+P
Sbjct: 95 VTMP 98
>SB_16986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 271 SSPGHFLTSYHIYNYPCSLTCRLLTHETGCHLNRNTIFIQPQAFYM 134
S+P ++ H C R LT + GC + R T++I+ A Y+
Sbjct: 226 STPHTPESTSHTPESKCDYIRRALTRKEGCTIKRQTVYIKMPAEYL 271
>SB_10435| Best HMM Match : PRAI (HMM E-Value=1.7)
Length = 379
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 77 MKIEEVKSTAKTQRISAHSHIKGLGLDENGVPIQMAAGLVGQES----AREAAGIVVDMI 244
MK + K +K + H + L LD + P A G G+++ ARE I+V
Sbjct: 150 MKALKTKKFSKLEFCLRHPYTIALSLDCSTHPAGTATG--GEQTKVADAREKLAILVASG 207
Query: 245 RSKKMAGRAL 274
+S++M GRAL
Sbjct: 208 KSREMVGRAL 217
>SB_48632| Best HMM Match : DUF265 (HMM E-Value=7.6e-22)
Length = 455
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQELGTK 346
+LL GPPG GKT + + Q L ++
Sbjct: 54 VLLTGPPGIGKTTLCSKVKQALASR 78
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 230 VVDMIRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEI 394
V+ I K R + + GP G+GK+++ LAI E+ + G VY ++
Sbjct: 263 VLSDITLKLKGSRLIGITGPCGSGKSSLLLAILNEMSLISGEAVVQGETVYVPQV 317
>SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6)
Length = 486
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 251 KKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPM 364
KK G +L ++G PGTGKTA + +++ +V CP+
Sbjct: 232 KKKPG-SLYISGAPGTGKTACLTMVIRDM-KEVSDCPV 267
>SB_58373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQELGTK 346
+L+ G PGTGK+ + +A LG K
Sbjct: 11 ILITGTPGTGKSTTGVELANRLGFK 35
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 278 LAGPPGTGKTAIALAIAQEL 337
L GPPGTGKT L +A+ L
Sbjct: 869 LEGPPGTGKTTSILCLARAL 888
>SB_42542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +2
Query: 242 IRSKKMAGRALLLAGPPGTGKTAIALAIAQELGTKVPFCPMVGSEVYSTEIKKTEVLMEN 421
I+ K + +++ GP G GK+++ L+I E+ + G Y +I + + E
Sbjct: 176 IKLKAVCDDLVIITGPVGGGKSSLLLSILGEIPLISGSISVRGRIAYFPQIPFGKQMEEE 235
Query: 422 FRRAIGLRIRETKE 463
R IG I + ++
Sbjct: 236 SREKIGQDISQRED 249
>SB_5068| Best HMM Match : DED (HMM E-Value=1.5e-17)
Length = 786
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 278 LAGPPGTGKTAIALAIAQEL 337
+ GPPG GK+ +A+ +A EL
Sbjct: 132 ITGPPGFGKSCVAIHVAHEL 151
>SB_56551| Best HMM Match : Fe_hyd_lg_C (HMM E-Value=0.0049)
Length = 113
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 151 PQAFYMTVSRDPLRFSCAFHFFNFHVESSFTLLN 50
P YM R P R F+FF F + + T LN
Sbjct: 4 PSKAYMQTRRFPKRHISIFNFFTFSCKQAVTFLN 37
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQELGTKVPFCPMVG 370
++L GP G GK+++ +AI E+ K F +G
Sbjct: 589 VILTGPVGGGKSSLLMAILGEIPLKRGFIKAIG 621
>SB_41548| Best HMM Match : ResIII (HMM E-Value=0.27)
Length = 514
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 257 MAGRALLLAGPPGTGKTAIALAIAQEL 337
++ R ++ GPPG GKT + + I Q L
Sbjct: 388 LSNRLAIVQGPPGCGKTFLGVKIVQLL 414
>SB_30681| Best HMM Match : An_peroxidase (HMM E-Value=4.3e-29)
Length = 576
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 262 GHFLTSYHIYNYPCSLTCRLLTHETGCHLNRNTIFIQ 152
G F S H+ + PC L+ + T+E L+ +TIF++
Sbjct: 401 GGFCRSPHVQSMPCFLSGDMRTNENPGLLSMHTIFLR 437
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 272 LLLAGPPGTGKTAIALAIAQEL 337
+++AGPPGTGK++ A+ + L
Sbjct: 2 IIVAGPPGTGKSSCISALIETL 23
>SB_12904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 150 GWMKMVFLFKWQPVSWV 200
G++K FLF+++P SWV
Sbjct: 9 GYIKAYFLFEYEPTSWV 25
>SB_3314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 278 LAGPPGTGKTAIALAIAQELGTKVP 352
+ GPPGTGKT +A+ I + P
Sbjct: 590 VVGPPGTGKTDVAVQIISNIYHNFP 614
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,676,296
Number of Sequences: 59808
Number of extensions: 431959
Number of successful extensions: 1542
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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