Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30618
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ...    40   0.002
Z72515-5|CAH60771.2|  331|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF047661-5|AAU05544.1|  822|Caenorhabditis elegans Hypothetical ...    27   9.8  
AC084159-8|AAK39361.2|  655|Caenorhabditis elegans Hypothetical ...    27   9.8  

>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 7 protein.
          Length = 1887

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = -2

Query: 81  IKDYFQRFLYQPKDREYPDLCQLPEL 4
           I  +  +FL QP+DREY DLC LPEL
Sbjct: 153 IDAFLTKFLVQPQDREYADLCNLPEL 178


>Z72515-5|CAH60771.2|  331|Caenorhabditis elegans Hypothetical
           protein T11A5.7 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 696 ILFANYLYNALLHCDDSLIVLHPFEYGSFTYLYPC 592
           I+   +L   LLHC    I+LH  +  ++T+L PC
Sbjct: 57  IIAQMHLTGFLLHCSGR-IMLHSLDLYNYTFLNPC 90


>AF047661-5|AAU05544.1|  822|Caenorhabditis elegans Hypothetical
           protein M70.4 protein.
          Length = 822

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 290 WTPKIYRHSQIFKFRHH 240
           WTPKI R +++F+F  H
Sbjct: 791 WTPKILRSNRVFRFSLH 807


>AC084159-8|AAK39361.2|  655|Caenorhabditis elegans Hypothetical
           protein Y73B3A.3 protein.
          Length = 655

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 290 WTPKIYRHSQIFKFRHH 240
           WTPKI R +++F+F  H
Sbjct: 624 WTPKILRSNRVFRFSLH 640


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,443,046
Number of Sequences: 27780
Number of extensions: 311986
Number of successful extensions: 786
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)