Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30614
(785 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core eudico... 113 4e-24
UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=... 105 1e-21
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 90 5e-17
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 81 2e-14
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 79 1e-13
UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recogniti... 70 8e-11
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2... 65 2e-09
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 65 2e-09
UniRef50_Q4TE65 Cluster: Chromosome undetermined SCAF5629, whole... 62 1e-08
UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse tr... 60 6e-08
UniRef50_UPI0000E495D7 Cluster: PREDICTED: similar to endonuclea... 55 2e-06
UniRef50_UPI0000E4A747 Cluster: PREDICTED: similar to endonuclea... 54 3e-06
UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos t... 52 2e-05
UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse tr... 50 9e-05
UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=4... 46 0.001
UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum dem... 44 0.004
UniRef50_Q8T5G5 Cluster: Polyprotein; n=35; Schistosoma japonicu... 43 0.010
UniRef50_UPI00015B614A Cluster: PREDICTED: similar to neprilysin... 42 0.013
UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse tr... 41 0.031
UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to endonuclea... 40 0.071
UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7; C... 40 0.071
UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropelli... 40 0.093
UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to endonuclea... 39 0.16
UniRef50_Q4P0D1 Cluster: Predicted protein; n=1; Ustilago maydis... 39 0.16
UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whol... 38 0.22
UniRef50_UPI0000E48634 Cluster: PREDICTED: hypothetical protein;... 37 0.66
UniRef50_Q6L3J9 Cluster: Polyprotein, putative; n=1; Solanum dem... 37 0.66
UniRef50_UPI0000F329BA Cluster: LOC534369 protein; n=1; Bos taur... 36 1.2
UniRef50_Q3XX39 Cluster: Putative uncharacterized protein precur... 34 3.5
UniRef50_O13873 Cluster: COP9 signalosome complex subunit 12; n=... 34 3.5
UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n... 34 4.6
>UniRef50_Q6L4B3 Cluster: Polyprotein, putative; n=6; core
eudicotyledons|Rep: Polyprotein, putative - Solanum
demissum (Wild potato)
Length = 868
Score = 113 bits (273), Expect = 4e-24
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLG 605
Y + CW K A + H AEMRMLR +CG TR ++IRNE +R + V V KLR RL
Sbjct: 564 YGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLR 623
Query: 604 WYGHVMRRNDNELGKRALTMNMEGF-RGRGRPKKKWMDCVKGDMCKRGVSEEMVYDRGVW 428
W+GHV RR+ + +R M +EG RGRGRPKK W + ++ D+ ++E+M DR W
Sbjct: 624 WFGHVKRRSADAPVRRCEVMVVEGTRRGRGRPKKYWEEVIRQDLAMLHITEDMTLDRKEW 683
Query: 427 KEK 419
+ +
Sbjct: 684 RSR 686
>UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=6;
Papilionoideae|Rep: Reverse transcriptase family member
- Glycine max (Soybean)
Length = 377
Score = 105 bits (252), Expect = 1e-21
Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLG 605
Y + CW K E + AEMRMLR +CG TR ++IRNE +R + V P+ +K+ RL
Sbjct: 248 YGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLR 307
Query: 604 WYGHVMRRNDNELGKRALTM-NMEGFRGRGRPKKKWMDCVKGDMCKRGVSEEMVYDRGVW 428
W+GHV RR + + +R M + RGRGRPKK + +K D+ G+ MV DR +W
Sbjct: 308 WFGHVERRPVDSVLRRVDQMERRQTIRGRGRPKKTIREVIKKDLEINGLDRSMVLDRTLW 367
Query: 427 KEKACCIDP 401
++ DP
Sbjct: 368 RKLIHVADP 376
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 90.2 bits (214), Expect = 5e-17
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTP-VTKKLRRTRL 608
Y + WT K DE R H EM LR + GVTR +R+RN ++R L + + ++ RL
Sbjct: 801 YGAETWTLKKVDENRLHTFEMACLRRIMGVTRFDRLRNTHIRTQLNMEETIIDRVATKRL 860
Query: 607 GWYGHVMRRNDNELGKRALTMNMEGFRGRGRPKKKWMDCVKGDMCKRGV-----SEEMVY 443
++GH+ R N L N+ G R RGRP K+W DC+K D R V + +
Sbjct: 861 RYFGHINRMNSKRYPHILLNGNIHGKRPRGRPAKRWTDCIKADCKNRQVDSLTKATRLTE 920
Query: 442 DRGVWK 425
DR VW+
Sbjct: 921 DRKVWQ 926
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTP-VTKKLRRTRL 608
Y + WT K D R EM LR + GVTR+++IRN +++ +L + V K+ R+
Sbjct: 888 YGAESWTVKKEDSNRLQVFEMACLRRIMGVTRLDKIRNTHIKESLNLDQDVMDKVSTKRI 947
Query: 607 GWYGHVMRRNDNELGKRALTMNMEGFRGRGRPKKKWMDCVKGDMCKRGV-----SEEMVY 443
++GHV+R K A+ + G R RGRP K+W+DC+ D R + + +
Sbjct: 948 KYFGHVLRMKPTRYPKIAVEGKVTGNRPRGRPPKRWLDCISEDCKARSIPRLTDASRLAA 1007
Query: 442 DRGVW 428
DR W
Sbjct: 1008 DRKTW 1012
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKV-TPVTKKLRRTRL 608
Y + WT + +D + EMR LR + GV M++IRNE +R L + + + +++ + L
Sbjct: 388 YGAESWTLRKSDRNKLEVFEMRCLRTILGVHLMDKIRNEEIRQRLNIPSTICEEITKRCL 447
Query: 607 GWYGHVMRRNDNELGKRALTMNMEGFRGRGRPKKKWMDCVKGDM-CKRGVSEEMVYDRGV 431
W+GHV+R + L +A + G R RGRP K+W D V+ D+ +E+ DR
Sbjct: 448 KWFGHVLRMPHHRLPYQAFQNDFNGRRPRGRPPKRWKDQVQYDVGLSTQEAEQRAQDRSD 507
Query: 430 W 428
W
Sbjct: 508 W 508
>UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recognition
motif); Calcium-binding EF- hand; n=1; Medicago
truncatula|Rep: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand - Medicago
truncatula (Barrel medic)
Length = 559
Score = 69.7 bits (163), Expect = 8e-11
Identities = 32/68 (47%), Positives = 42/68 (61%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLG 605
Y + CW K E + AEMRMLR + G TR +RIRN+ +R + V P+ +KL RL
Sbjct: 290 YGTECWAVKSQHENQVSVAEMRMLRWMSGKTRHDRIRNDTIRERVGVAPIVEKLVENRLR 349
Query: 604 WYGHVMRR 581
W+GHV RR
Sbjct: 350 WFGHVERR 357
>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
F28E10.3 [imported] - Caenorhabditis elegans; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
protein F28E10.3 [imported] - Caenorhabditis elegans -
Strongylocentrotus purpuratus
Length = 824
Score = 65.3 bits (152), Expect = 2e-09
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLG 605
Y + WT E + A++ M R + +T +R N+++R KV + + +R +
Sbjct: 304 YAAETWTLTSKMERKLAASQHNMERSILSITYKDRKTNKWIREQTKVQDILEAEKRRKWN 363
Query: 604 WYGHVMRRNDNELGKRALT--MNMEGFRGRGRPKKKWMDCVKGDMCKRGVSEEMVYDRGV 431
W GH+ RRNDN A+T EG R RGR +K+W D ++ + ++ + +RG+
Sbjct: 364 WAGHISRRNDNRWSS-AITHWTPYEGKRNRGRQRKRWRDELQQFWGQTNWHQQAL-NRGI 421
Query: 430 WKEKA 416
W A
Sbjct: 422 WNHHA 426
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 65.3 bits (152), Expect = 2e-09
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLG 605
Y S W+ + R + M R + GV+ +RIRNE +R +VT + +++ + +
Sbjct: 365 YGSETWSLTMGLIRRLKVTQRAMERAMLGVSLRDRIRNEEIRRRTRVTDIARRIAKIKWQ 424
Query: 604 WYGHVMRRNDNELGKRALTMN-MEGFRGRGRPKKKWMDCVKGDMCKRGVSEEM--VYDRG 434
W GH+ RR D G++ L G R GRP +W D D+ K S M DR
Sbjct: 425 WAGHIARRADGRWGRKVLEWRPRAGRRSVGRPPTRWTD----DLVKVAGSTWMQAAQDRS 480
Query: 433 VWK 425
+WK
Sbjct: 481 LWK 483
>UniRef50_Q4TE65 Cluster: Chromosome undetermined SCAF5629, whole
genome shotgun sequence; n=3; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5629,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 73
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = -2
Query: 748 ETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLGWYGHVMRRNDNE 569
ET AEM+MLR GVTRM+ I+ EY+RG V K+R TRL W+GHV +R D+E
Sbjct: 15 ETELEVAEMKMLRFSLGVTRMDEIKKEYIRGTAHVRCFGDKVRETRLRWFGHV-QRTDSE 73
>UniRef50_UPI0000E48997 Cluster: PREDICTED: similar to reverse
transcriptase-like; n=6; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 415
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVT-PVTKKLRRTRL 608
Y + WT ADE R AAEM R + ++ ++ N V L + K+ R +L
Sbjct: 273 YGAESWTLLKADENRIMAAEMWFWRKMLKISWKDKRTNLSVLQELNTERDLLGKVARLKL 332
Query: 607 GWYGHVMRRNDNELGKRALTMNMEGFRGRGRPKKKWMDCVK 485
G++GH++R + + L + + +EG R RGR +K+W D +K
Sbjct: 333 GYFGHILRGSGSPLAAQIIESQVEGKRKRGRQRKQWFDNIK 373
>UniRef50_UPI0000E495D7 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Deuterostomia|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 604
Score = 55.2 bits (127), Expect = 2e-06
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLG 605
Y + WT + + HA MR LR + ++ +++ N+ V + + L R L
Sbjct: 476 YGAESWTLYTSQVKKLHAFMMRHLRAIMRISWKDKVTNKEVLERANLPSMEDLLIRKNLR 535
Query: 604 WYGHVMRRNDNELGKRALTMNM-EGFRGRGRPKKKWMDCVKGDMCKRGVSEE----MVYD 440
W GHV+R L K+ L + G RG GRP+ ++ D +K ++ +R + +
Sbjct: 536 WTGHVIRMPSERLPKQVLFSQLPAGERGIGRPRLRYKDTIKRNLKRRQIETKTWTTAAGQ 595
Query: 439 RGVWK 425
R VW+
Sbjct: 596 RAVWR 600
>UniRef50_UPI0000E4A747 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 555
Score = 54.4 bits (125), Expect = 3e-06
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 5/125 (4%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLG 605
Y + WT + + HA MR LR + ++ +++ N+ V + + L R L
Sbjct: 427 YGAESWTLYKSQVKKLHAFMMRHLRAIMRISWKDKVTNKEVLERANLPSMEDLLIRKNLR 486
Query: 604 WYGHVMRRNDNELGKRALTMNM-EGFRGRGRPKKKWMDCVKGDMCKRGVSEE----MVYD 440
W GHV+R L K+ L + G RG GRP+ ++ D +K ++ +R + +
Sbjct: 487 WTGHVIRMPSERLPKQVLFSQLPAGERGIGRPRLRYKDTIKRNLKRRQIETKTWTTAAGQ 546
Query: 439 RGVWK 425
R VW+
Sbjct: 547 RAVWR 551
>UniRef50_O97916 Cluster: Reverse transcriptase-like; n=70; Bos
taurus|Rep: Reverse transcriptase-like - Bos taurus
(Bovine)
Length = 335
Score = 51.6 bits (118), Expect = 2e-05
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLR-RTRL 608
Y WT K A+ R A E+ R L V R + + + + L + +L
Sbjct: 200 YGCKSWTIKKAERQRMDAFELWCWRRLLRVPWTARRSTQSILKEISPGCSLEGLMLKLKL 259
Query: 607 GWYGHVMRRNDNELGKRALTMNMEGFRGRGRPKKKWMDCVKGDM-CKRGVSEEMVYDRGV 431
++GH+MRR D+ L K + +EG R RGR + +W+D + M G E+V DR
Sbjct: 260 QYFGHLMRRADS-LEKTLMLGKIEGRRRRGRQRMRWLDGIINSMDMGLGGLRELVMDRET 318
Query: 430 WKEKAC 413
W C
Sbjct: 319 WCAVVC 324
>UniRef50_UPI0000F1FDAD Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Danio rerio|Rep: PREDICTED:
similar to reverse transcriptase-like - Danio rerio
Length = 249
Score = 49.6 bits (113), Expect = 9e-05
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVT-PVTKKLRRTRL 608
Y WT K D + A E+ R + + +I N+ + +K + K+ + RL
Sbjct: 132 YACESWTLKKKDRRKIDAFELWCWRQMMRIPWAAKITNKTILERVKQNVSLEGKITKQRL 191
Query: 607 GWYGHVMRRNDNELGKRALTMN-MEGFRGRGRPKKKWMDCVKGD 479
++GH+M+ N E A T+ + G R RGR + +W+D +K D
Sbjct: 192 SFFGHIMQTNSMET---AFTLGAVSGSRRRGRQRTRWLDTIKTD 232
>UniRef50_Q4QQE8 Cluster: Endonuclease-reverse transcriptase; n=43;
Eumetazoa|Rep: Endonuclease-reverse transcriptase -
Schistosoma mansoni (Blood fluke)
Length = 992
Score = 45.6 bits (103), Expect = 0.001
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLG 605
Y + W T A + LR + + + I N+ + P +++R+ R
Sbjct: 854 YGAETWRTTKAIIQKIQVFINSCLRKILRIRWPDTISNKLLWETTNQIPAEEEIRKKRWK 913
Query: 604 WYGHVMRRNDNELGKRALTMNMEGFRGRGRPKKKWMDCVKGDMCKRGVS----EEMVYDR 437
W H +R++ N + ++ALT N E R RGRPK ++ DM + + E+ DR
Sbjct: 914 WIWHTLRKSPNCVTRQALTWNPERQRRRGRPKNTLRREIETDMRRMNKNWKELEKKAQDR 973
Query: 436 GVWKE 422
W++
Sbjct: 974 VGWRK 978
>UniRef50_Q6L4B8 Cluster: Polyprotein, putative; n=1; Solanum
demissum|Rep: Polyprotein, putative - Solanum demissum
(Wild potato)
Length = 115
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -2
Query: 676 RNEYVRGNLKVTPVTKKLRRTRLGWYGHVMRRNDNELGKRALTMNMEG-FRGRGRPKKKW 500
RNE R + + K R+ RL W+GHVMRR+ +R +++ G RG GR K W
Sbjct: 53 RNEDFREKVGDASIVDKTRKARLRWFGHVMRRSTEAPVRRCERLDVVGKRRGSGRLKNYW 112
>UniRef50_Q8T5G5 Cluster: Polyprotein; n=35; Schistosoma
japonicum|Rep: Polyprotein - Schistosoma japonicum (Blood
fluke)
Length = 1091
Score = 42.7 bits (96), Expect = 0.010
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVT---PVTKKLRRT 614
Y W +V D R + R LR + V NR+ N +VR + + + +
Sbjct: 935 YGCETWPLRVEDIRRILVFDHRCLRNIARVCWDNRVSNAWVRNRVLGKYGKSIDEVVNLH 994
Query: 613 RLGWYGHVMRRNDNELGKRAL--TMNMEGFRGRGRPKKKWMDCVK 485
RL W GHV+R D+ L +RA+ + + + RG K W +K
Sbjct: 995 RLRWLGHVLRMPDHRLPRRAMLSVVGVGWKKARGGQTKTWHQSMK 1039
>UniRef50_UPI00015B614A Cluster: PREDICTED: similar to neprilysin-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to neprilysin-like protein - Nasonia vitripennis
Length = 979
Score = 42.3 bits (95), Expect = 0.013
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = -2
Query: 682 RIRNEYVRGNLKVTP-VTKKLRRTRLGWYGHVMRRNDNELGKRALTMNMEGFRGRGRPKK 506
R+ N+ + NL +P + + ++ RLGW GHV R D+ + GRP+
Sbjct: 870 RLHNDKLH-NLYASPNINRIIKSRRLGWAGHVERMGDDRTAACVMKGRPMVTLPLGRPRL 928
Query: 505 KWMDCVKGDMCKRGVSEEMV 446
+W D VK D+ + G + ++
Sbjct: 929 RWEDNVKADLVEIGRKKTLI 948
>UniRef50_UPI0000E4635A Cluster: PREDICTED: similar to reverse
transcriptase-like; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to reverse
transcriptase-like - Strongylocentrotus purpuratus
Length = 281
Score = 41.1 bits (92), Expect = 0.031
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKK-LRRTRL 608
Y S W D R A EM R L V+ ++ N +V ++ KK + +L
Sbjct: 190 YGSESWAMTKNDRKRVDAFEMWCYRRLLQVSWKDKKTNVWVLEKIRTDLTIKKGIMERKL 249
Query: 607 GWYGHVMRRNDNELGKRALTMNMEGFRGRG 518
++GH++RR++ + K+ L +EG RGRG
Sbjct: 250 YYFGHIVRRSEG-IEKQILQGAVEGKRGRG 278
>UniRef50_UPI0000E496F7 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 890
Score = 39.9 bits (89), Expect = 0.071
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLG 605
Y S WT + + R+LR V + + N + +TP++ +LR RL
Sbjct: 776 YGSEAWTLTSSLAKQLDGCYTRLLRAALNVNWSDHMTN--IELYRDITPISARLRDRRLR 833
Query: 604 WYGHVMRRNDNELGKRALTMNMEGFRGRGRPKKKWMDCVKGDMC--KRGVSEEMVYD 440
GH R + + G R RGRP ++D ++ D C ++ + ++ ++D
Sbjct: 834 LSGHCWRSKIEIISQMLFWEPSRGKRTRGRPASTYIDQLEKDTCLPRQELPQKRIFD 890
>UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7;
Caenorhabditis elegans|Rep: Uncharacterized protein
F52C9.6 - Caenorhabditis elegans
Length = 279
Score = 39.9 bits (89), Expect = 0.071
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVT----RMNRIRNEYVRGNLKVTPVTKKLRR 617
Y S WT A R + R L G+T R + E +R +V +++
Sbjct: 138 YGSEAWTFNKALSERVRITHASLERRLVGITLTQQRERDLHREDIRVMSQVRDPLNFVKK 197
Query: 616 TRLGWYGHVMRRNDNELGKRALTMNMEGF-RGRGRPKKKWMDCVKGDMCKRGVSEEMV 446
+LGW GHV RR D + R GR +W D ++ ++ R E++
Sbjct: 198 RKLGWAGHVARRKDGRWTTLMTEWRPWNWKRYVGRTPMRWTDSLRKEITTRDADGEVI 255
>UniRef50_UPI0000E4898C Cluster: PREDICTED: similar to fibropellin
Ia; n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to fibropellin Ia - Strongylocentrotus
purpuratus
Length = 1096
Score = 39.5 bits (88), Expect = 0.093
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -2
Query: 553 LTMNMEGFRGRGRPKKKWMDCVKGDMCKRGV-----SEEMVYDRGVWK 425
L N+ G RGRP K+W DC+K D R V + + DR VW+
Sbjct: 18 LNENVHGKHPRGRPAKRWTDCIKADCNNRQVDSLTKATRLTEDRKVWR 65
>UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1253
Score = 38.7 bits (86), Expect = 0.16
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Frame = -2
Query: 766 TTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRLGWYGHVM 587
TTK+A E R+LR V I N+ + GNL V++K+R RL + GH
Sbjct: 1131 TTKLAKEL--DGCYTRLLRTAFNVHWSQHITNKELYGNLP--KVSEKIRERRLRFAGHSC 1186
Query: 586 RRNDNELGKRALTMNMEGFRGR---GRPKKKWMDCVKGDM-CKRGVSEEMVYDRGVWKE- 422
RN NE + L + + G+ GRP + D +K D + + + DR VW
Sbjct: 1187 -RNINEPISQLLLSDWKPKHGKKKPGRPYLTYTDLLKKDTGLELSEIKAAMLDRNVWMAI 1245
Query: 421 KACCIDP 401
A +DP
Sbjct: 1246 TARAVDP 1252
>UniRef50_Q4P0D1 Cluster: Predicted protein; n=1; Ustilago
maydis|Rep: Predicted protein - Ustilago maydis (Smut
fungus)
Length = 229
Score = 38.7 bits (86), Expect = 0.16
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +3
Query: 432 TPLSYTISSLTPLLHISPFTQSIHFFLGLPLPLKPSIFIVKALLPSSLSFRLITCPYHPK 611
+P T+++L+ L+H+ P +S +PL + + L+ +L FRL+T P P
Sbjct: 131 SPFGVTVANLSSLVHLQPRARSRMNCSAQSVPLAFCVSVALLLVVRNLDFRLVTYPRTP- 189
Query: 612 RVRLNFFVT 638
VRLN VT
Sbjct: 190 -VRLNSSVT 197
>UniRef50_Q4SRF1 Cluster: Chromosome undetermined SCAF14527, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14527,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 52
Score = 38.3 bits (85), Expect = 0.22
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 589 MRRNDNEL-GKRALTMNMEGFRGRGRPKKKWMDCVKGDMCKRGVSEE 452
M R + E G+R L + + G R RGR K+++MD VK DM G EE
Sbjct: 1 MSRGEMEKDGRRMLRLELPGRRPRGRTKRRFMDVVKEDMKVVGAREE 47
>UniRef50_UPI0000E48634 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 697
Score = 36.7 bits (81), Expect = 0.66
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = -2
Query: 625 LRRTRLGWYGHVMRRNDNELGKRALTMNM-EGFRGRGRPKKKWMDCVKGDMCKRGVSEE- 452
L R L W GHV+R L K+ L + G RG GRP + + D +K ++ +R + +
Sbjct: 5 LIRKNLRWTGHVIRMPSERLPKQVLFSQLPAGERGIGRP-RLYKDTIKRNLKRRQIETKT 63
Query: 451 ---MVYDRGVWKEKAC 413
R VW+ C
Sbjct: 64 WTTAAGQRAVWRTAIC 79
>UniRef50_Q6L3J9 Cluster: Polyprotein, putative; n=1; Solanum
demissum|Rep: Polyprotein, putative - Solanum demissum
(Wild potato)
Length = 139
Score = 36.7 bits (81), Expect = 0.66
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 784 YVSACWTTKVADETRWHAAEMRMLR*LCGVTRMNRIRNEYVRGNLKVTPVTKKLRRTRL 608
Y C + + + + AEMRM R +C TR ++I N+ + + +T V K+R RL
Sbjct: 80 YEVECLSVQNSYVQQMKVAEMRMFRWMCRQTRKDKIGNKDIWSKVGITVVVDKMREARL 138
>UniRef50_UPI0000F329BA Cluster: LOC534369 protein; n=1; Bos
taurus|Rep: LOC534369 protein - Bos Taurus
Length = 87
Score = 35.9 bits (79), Expect = 1.2
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 619 RTRLGWYGHVMRRNDNELGKRALTMNMEGFRGRGRPKKKWMDCV--KGDMCKRGVSEEMV 446
+ +L ++GH+MRR D+ L K + + G R GR + +W++ + D+ + E
Sbjct: 4 KLKLQYFGHLMRRVDS-LEKTLMLGGIGGKRRSGRQRMRWLNDITDSNDVSLSELRELAA 62
Query: 445 YDRGVWKEKACC 410
R W CC
Sbjct: 63 PPRRTWCPATCC 74
>UniRef50_Q3XX39 Cluster: Putative uncharacterized protein
precursor; n=1; Enterococcus faecium DO|Rep: Putative
uncharacterized protein precursor - Enterococcus faecium
DO
Length = 591
Score = 34.3 bits (75), Expect = 3.5
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 616 YVSTSLSQ-VSLSDFL*HIHSVFYSFSLLHTAIATFASLLHAIAFHP 753
Y +T+LS+ +S S FL H + S+++L + FAS+L A+AF P
Sbjct: 69 YTTTTLSKGISYSLFLVLAHKLHLSYAVLFGMFSIFASILVALAFKP 115
>UniRef50_O13873 Cluster: COP9 signalosome complex subunit 12; n=1;
Schizosaccharomyces pombe|Rep: COP9 signalosome complex
subunit 12 - Schizosaccharomyces pombe (Fission yeast)
Length = 423
Score = 34.3 bits (75), Expect = 3.5
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 640 PVTKKLRRTRLGWYGHVMRRNDNELGKRALTMNMEGFRG---RGRPKKKWMDCVK 485
P+T+ L+ LG +G +++N+ L K + + +EG R R +K W+ C K
Sbjct: 306 PLTRALKSGNLGEFGKCLQKNETLLAKTKIYLTLEGTRDLCIRNLFRKTWIICGK 360
>UniRef50_UPI0000F33B2A Cluster: UPI0000F33B2A related cluster; n=3;
Bos taurus|Rep: UPI0000F33B2A UniRef100 entry - Bos
Taurus
Length = 253
Score = 33.9 bits (74), Expect = 4.6
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -2
Query: 619 RTRLGWYGHVMRRNDNELGKRALTMNMEGFRGRGRPKKKWMDCVKGDMCKRGV-SEEMVY 443
+ +L ++GH RR D+ L K + +EG R RG+ + KW+D + M + + E
Sbjct: 178 KLKLQYFGH--RRADS-LEKTLMLGKIEGKRRRGQKRMKWLDGITNSMDMSLICTSENPR 234
Query: 442 DRGVW 428
D G W
Sbjct: 235 DGGAW 239
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,441,434
Number of Sequences: 1657284
Number of extensions: 15605244
Number of successful extensions: 37779
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 36376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37751
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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