Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30613
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.0  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         26   1.3  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    24   4.1  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   4.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.2  
U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase...    23   9.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.5  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.5  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   9.5  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   9.5  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = -2

Query: 276 GHGSSEARLIPHYTRVLLTVPRDSSLTPVTTPPLAVSWSGTTLV 145
           G    +    P+YT +LL     S   PV  P     W G +L+
Sbjct: 788 GEPGRDCEAAPYYTGILLVRHSQSDEVPVCEPGHLKLWDGYSLL 831


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 699 NLAHVPGPRHAILVLTDCTSSSAPDSIVGV 610
           NL  +PGPR A+  L      SAP  ++ V
Sbjct: 67  NLLGLPGPRPAVRHLHSSVGKSAPQFLLNV 96


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 45  IRPITSRRPWFCRLW 1
           +RP   RRPW  R W
Sbjct: 147 VRPAVIRRPWIRRPW 161


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 109 ARTRQVPSLVDPQHPGRT*TSHTPNHKSP 23
           A ++ VP++V+PQ P R  T   P  ++P
Sbjct: 374 AGSQPVPAVVNPQQPSRP-TIPAPQQQTP 401


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 107 SHPTGAVACRPPTPWSHIDKPYAQSQVA 24
           SHP+  +  +PP P S +  P   + +A
Sbjct: 610 SHPSAGMVPQPPPPGSALGHPSIPTSLA 637


>U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 89

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 467 GAISVWGQWFRYSNGP 420
           G + VWG + RY  GP
Sbjct: 1   GCVMVWGCFSRYGVGP 16


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 559 PLALPSLMLTTCKTTSCPALTNV 491
           P  +PS +L  C+TT  P L  +
Sbjct: 561 PDGIPSTVLKRCQTTVAPILAKL 583


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/45 (26%), Positives = 18/45 (40%)
 Frame = -1

Query: 157 YNFGAISPLARPYTGIARTRQVPSLVDPQHPGRT*TSHTPNHKSP 23
           Y  G       P+  + + +Q  S    QHPG +   H  +H  P
Sbjct: 148 YGGGCYGSPPVPWYQLPQQQQPSSYHQQQHPGHSQHHHHHHHHHP 192


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 116 GYRSHPTGAVACRPPTPWSHIDKPYAQSQVAGHGF 12
           G+  HP  A A    T  +H D+  A +  A  GF
Sbjct: 9   GFYGHPHQAAAGMMTTTGTHHDQTTAAAAAAYRGF 43


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 116 GYRSHPTGAVACRPPTPWSHIDKPYAQSQVAGHGF 12
           G+  HP  A A    T  +H D+  A +  A  GF
Sbjct: 9   GFYGHPHQAAAGMMTTTGTHHDQTTAAAAAAYRGF 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,851
Number of Sequences: 2352
Number of extensions: 19543
Number of successful extensions: 44
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)