Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30606
(761 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20140.1 68417.m02947 leucine-rich repeat transmembrane prote... 38 0.006
At5g48940.1 68418.m06054 leucine-rich repeat transmembrane prote... 37 0.013
At2g23950.1 68415.m02860 leucine-rich repeat family protein / pr... 36 0.022
At1g33590.1 68414.m04158 disease resistance protein-related / LR... 36 0.029
At4g28650.1 68417.m04095 leucine-rich repeat transmembrane prote... 35 0.068
At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR... 35 0.068
At4g36180.1 68417.m05148 leucine-rich repeat family protein cont... 34 0.090
At3g49670.1 68416.m05429 leucine-rich repeat transmembrane prote... 34 0.090
At1g55610.1 68414.m06365 protein kinase family protein contains ... 34 0.090
At2g33060.1 68415.m04054 leucine-rich repeat family protein cont... 34 0.12
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 33 0.16
At3g15410.1 68416.m01955 leucine-rich repeat family protein cont... 33 0.16
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 33 0.16
At4g22730.1 68417.m03279 leucine-rich repeat transmembrane prote... 33 0.21
At3g11330.1 68416.m01378 leucine-rich repeat family protein 33 0.21
At3g02130.1 68416.m00180 leucine-rich repeat transmembrane prote... 33 0.21
At2g33050.1 68415.m04053 leucine-rich repeat family protein cont... 33 0.21
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 33 0.27
At4g09430.1 68417.m01553 disease resistance protein (TIR-NBS-LRR... 33 0.27
At2g33080.1 68415.m04056 leucine-rich repeat family protein cont... 33 0.27
At1g15740.1 68414.m01888 leucine-rich repeat family protein 33 0.27
At4g20270.1 68417.m02961 leucine-rich repeat transmembrane prote... 32 0.36
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 32 0.36
At2g15300.1 68415.m01745 leucine-rich repeat transmembrane prote... 32 0.36
At5g19680.1 68418.m02341 leucine-rich repeat family protein cont... 32 0.48
At4g39400.1 68417.m05577 brassinosteroid insensitive 1 (BRI1) id... 32 0.48
At1g33670.1 68414.m04165 leucine-rich repeat family protein cont... 32 0.48
At4g26050.1 68417.m03750 leucine-rich repeat family protein cont... 31 0.63
At3g28040.1 68416.m03500 leucine-rich repeat transmembrane prote... 31 0.63
At3g23110.1 68416.m02913 disease resistance family protein conta... 31 0.63
At2g15080.2 68415.m01719 disease resistance family protein conta... 31 0.84
At2g15080.1 68415.m01718 disease resistance family protein conta... 31 0.84
At5g49750.1 68418.m06162 leucine-rich repeat family protein cont... 31 1.1
At2g31880.1 68415.m03895 leucine-rich repeat transmembrane prote... 31 1.1
At1g73070.1 68414.m08449 leucine-rich repeat family protein cont... 31 1.1
At3g11080.1 68416.m01339 disease resistance family protein conta... 30 1.5
At2g32680.1 68415.m03995 disease resistance family protein conta... 30 1.5
At2g13790.1 68415.m01522 leucine-rich repeat family protein / pr... 30 1.5
At1g68400.1 68414.m07814 leucine-rich repeat transmembrane prote... 30 1.5
At1g12460.1 68414.m01440 leucine-rich repeat transmembrane prote... 30 1.5
At4g28380.1 68417.m04062 leucine-rich repeat family protein cont... 30 1.9
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 30 1.9
At1g73080.1 68414.m08450 leucine-rich repeat transmembrane prote... 30 1.9
At5g51560.1 68418.m06393 leucine-rich repeat transmembrane prote... 29 2.6
At5g40170.1 68418.m04875 disease resistance family protein conta... 29 2.6
At4g39270.2 68417.m05561 leucine-rich repeat transmembrane prote... 29 2.6
At4g39270.1 68417.m05562 leucine-rich repeat transmembrane prote... 29 2.6
At3g47580.1 68416.m05180 leucine-rich repeat transmembrane prote... 29 2.6
At1g66150.1 68414.m07508 leucine-rich repeat protein kinase, put... 29 2.6
At1g17240.1 68414.m02100 leucine-rich repeat family protein cont... 29 2.6
At1g08160.1 68414.m00900 harpin-induced protein-related / HIN1-r... 29 2.6
At5g61480.1 68418.m07714 leucine-rich repeat transmembrane prote... 29 3.4
At4g20940.1 68417.m03034 leucine-rich repeat family protein cont... 29 3.4
At3g53590.1 68416.m05919 leucine-rich repeat transmembrane prote... 29 3.4
At3g05370.1 68416.m00586 disease resistance family protein conta... 29 3.4
At1g33610.1 68414.m04160 leucine-rich repeat family protein cont... 29 3.4
At1g13910.1 68414.m01632 leucine-rich repeat family protein cont... 29 3.4
At5g07910.1 68418.m00914 leucine-rich repeat family protein cont... 29 4.5
At3g47090.1 68416.m05113 leucine-rich repeat transmembrane prote... 29 4.5
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 4.5
At4g08560.1 68417.m01408 pumilio/Puf RNA-binding domain-containi... 28 5.9
At3g19230.1 68416.m02440 leucine-rich repeat family protein cont... 28 5.9
At5g05850.1 68418.m00643 leucine-rich repeat family protein cont... 28 7.8
At4g13810.1 68417.m02140 disease resistance family protein / LRR... 28 7.8
At3g55950.1 68416.m06217 protein kinase family protein contains ... 28 7.8
At1g63430.1 68414.m07173 leucine-rich repeat transmembrane prote... 28 7.8
At1g08590.1 68414.m00952 CLAVATA1 receptor kinase (CLV1) similar... 28 7.8
>At4g20140.1 68417.m02947 leucine-rich repeat transmembrane protein
kinase, putative Cf-2.2, Lycopersicon pimpinellifolium,
PIR:T10515
Length = 1249
Score = 38.3 bits (85), Expect = 0.006
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 478 ILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-E 651
ILNL NN LTG IP + + GL S+++L L L L N L E
Sbjct: 243 ILNLANNSLTGEIPSQLGEMSQLQYLSLMANQLQGLIPKSLADLGNLQTLDLSANNLTGE 302
Query: 652 YPQDLKNGFSLTKLEELDLGGNDIRTALTTDLFSN 756
P++ N +++L +L L N + +L + SN
Sbjct: 303 IPEEFWN---MSQLLDLVLANNHLSGSLPKSICSN 334
>At5g48940.1 68418.m06054 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1135
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEY- 654
L L NN++TG IPK + ++ G +S L +L L NN L Y
Sbjct: 472 LRLVNNRITGEIPKGIGFLQNLSFLDLSENNLSGPVPLEISNCRQLQMLNLSNNTLQGYL 531
Query: 655 PQDLKNGFSLTKLEELDLGGNDI 723
P L SLTKL+ LD+ ND+
Sbjct: 532 PLSLS---SLTKLQVLDVSSNDL 551
Score = 32.7 bits (71), Expect = 0.27
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +1
Query: 451 PTPLDV----RTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGL 615
P PL++ + +LNL NN L G +P ++S + G S+ L L
Sbjct: 506 PVPLEISNCRQLQMLNLSNNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLISL 565
Query: 616 TVLKLGNNRLI-EYPQDLKNGFSLTKLEELDLGGNDIRTALTTDLF 750
L L N E P L + T L+ LDL N+I + +LF
Sbjct: 566 NRLILSKNSFNGEIPSSLGH---CTNLQLLDLSSNNISGTIPEELF 608
>At2g23950.1 68415.m02860 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 634
Score = 36.3 bits (80), Expect = 0.022
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-EY 654
++LQNN ++G IP ++ S G GSV++L L L+L NN L +
Sbjct: 103 VSLQNNNISGKIPPEICSLPKLQTLDLSNNRFSGEIPGSVNQLSNLQYLRLNNNSLSGPF 162
Query: 655 PQDLKNGFSLTKLEELDLGGNDIR 726
P L + L LDL N++R
Sbjct: 163 PASLS---QIPHLSFLDLSYNNLR 183
>At1g33590.1 68414.m04158 disease resistance protein-related / LRR
protein-related contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 477
Score = 35.9 bits (79), Expect = 0.029
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +1
Query: 487 LQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-EYPQ 660
++NN+L+G +P ++ + G S+S L LT LKLGNN L P
Sbjct: 133 IENNRLSGTLPANIGALSQLEAFSLEGNRFTGPIPSSISNLTLLTQLKLGNNLLTGTIPL 192
Query: 661 DLKNGFSLTKLEELDLGGNDIRTALTTDLFSN 756
+ N L + L+LGGN + T D+F +
Sbjct: 193 GVAN---LKLMSYLNLGGNRL-TGTIPDIFKS 220
>At4g28650.1 68417.m04095 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase 5,
Arabidopsis thaliana, PIR1:S27756
Length = 1013
Score = 34.7 bits (76), Expect = 0.068
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEYP 657
LNL+NN LTG IP+ + + S+ G+ S+ P L +L + N+L P
Sbjct: 529 LNLRNNNLTGEIPRQITTMSALAVLDLSNNSLTGVLPESIGTSPALELLNVSYNKLTG-P 587
Query: 658 QDLKNGFSLTKLEELDLGGN 717
+ NGF L + DL GN
Sbjct: 588 VPI-NGF-LKTINPDDLRGN 605
>At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1183
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 592 SVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGND 720
S ++ P LT LKL N + + P+D+ L LE LDLGGND
Sbjct: 789 SFADFPCLTELKLINLNIEDIPEDI---CQLQLLETLDLGGND 828
>At4g36180.1 68417.m05148 leucine-rich repeat family protein
contains protein kinase domain, Pfam:PF00069; contains
leucine-rich repeats, Pfam:PF00560
Length = 1136
Score = 34.3 bits (75), Expect = 0.090
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-EY 654
L+L +N ++G IP ++ + +MG +S LP L VL LG N L E
Sbjct: 577 LSLSDNHISGSIPPEIGNCSALEVLELRSNRLMGHIPADLSRLPRLKVLDLGQNNLSGEI 636
Query: 655 PQDLKNGFSLTKL 693
P ++ SL L
Sbjct: 637 PPEISQSSSLNSL 649
Score = 32.7 bits (71), Expect = 0.27
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 478 ILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-E 651
+L+ + N L G IP+ + S G S+ L L L LG N L
Sbjct: 384 VLDFEGNSLKGQIPEFLGYMKALKVLSLGRNSFSGYVPSSMVNLQQLERLNLGENNLNGS 443
Query: 652 YPQDLKNGFSLTKLEELDLGGNDIRTALTTDL 747
+P +L +LT L ELDL GN A+ +
Sbjct: 444 FPVEL---MALTSLSELDLSGNRFSGAVPVSI 472
>At3g49670.1 68416.m05429 leucine-rich repeat transmembrane protein
kinase, putative CLAVATA1 receptor kinase, Arabidopsis
thaliana, EMBL:ATU96879
Length = 1002
Score = 34.3 bits (75), Expect = 0.090
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +1
Query: 469 RTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRL 645
R IL+L +NKLTG +P ++ S + G S+ + LT +++G N L
Sbjct: 360 RLVILDLSSNKLTGTLPPNMCSGNRLMTLITLGNFLFGSIPDSLGKCESLTRIRMGENFL 419
Query: 646 I-EYPQDLKNGFSLTKLEELDLGGN 717
P++L F L KL +++L N
Sbjct: 420 NGSIPKEL---FGLPKLSQVELQDN 441
>At1g55610.1 68414.m06365 protein kinase family protein contains
Prosite:PS00107: Protein kinases ATP-binding region
signature
Length = 1166
Score = 34.3 bits (75), Expect = 0.090
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +1
Query: 463 DVRTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNN 639
++ T ILN NN LTG IP+ ++ + G + L L +L+LGNN
Sbjct: 476 NLETLILN--NNLLTGSIPESISRCTNMIWISLSSNRLTGKIPSGIGNLSKLAILQLGNN 533
Query: 640 RLI-EYPQDLKNGFSLTKLEELDLGGNDIRTALTTDLFS 753
L P+ L N SL LDL N++ L +L S
Sbjct: 534 SLSGNVPRQLGNCKSLI---WLDLNSNNLTGDLPGELAS 569
>At2g33060.1 68415.m04054 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-0B
[Lycopersicon esculentum] gi|3894387|gb|AAC78593
Length = 808
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +1
Query: 568 SIMGLDLGSVSELP-GLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGNDIR 726
S++ + S S++P L L L + LIE+P LKN LTKLE +DL N I+
Sbjct: 278 SLLATSITSDSKIPLNLENLVLLSCGLIEFPTILKN---LTKLEHIDLSNNKIK 328
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +1
Query: 475 TILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIE 651
+++ NNK TG IPK + + + G + +L +TV N I
Sbjct: 255 SVVTFANNKFTGCIPKSIGNMKNLNEIVFMDNDLGGCFPSEIGKLSNVTVFDASKNSFIG 314
Query: 652 YPQDLKNGF-SLTKLEELDLGGNDI 723
L F LT +EE+D+ GN +
Sbjct: 315 R---LPTSFVGLTSVEEIDISGNKL 336
>At3g15410.1 68416.m01955 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596;
identical to leucine-rich repeat protein [Arabidopsis
thaliana] gi|2760084|emb|CAA76000
Length = 584
Score = 33.5 bits (73), Expect = 0.16
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +1
Query: 415 VVDCSGYGLTEFPTPLDVRTTI--LNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDL 588
V++ S L++ P + T + L++ N ++ +P+ + S + L
Sbjct: 72 VLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLDCSSNRLKELP- 130
Query: 589 GSVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGNDIRTALT 738
S+ L+ LK NN++ P+D+ N +KL +LD+ GN + TAL+
Sbjct: 131 DSIGRCLDLSDLKATNNQISSLPEDMVN---CSKLSKLDVEGNKL-TALS 176
Score = 31.9 bits (69), Expect = 0.48
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +1
Query: 418 VDCSGYGLTEFPTPLDVRTTILNLQ--NNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLG 591
+DCS L E P + + +L+ NN+++ +P+D+ + + L
Sbjct: 119 LDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSEN 178
Query: 592 SVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGNDI 723
++ L L N L PQ++ SL++L LDL N I
Sbjct: 179 HIASWTMLAELNACKNMLGVLPQNIG---SLSRLIRLDLHQNKI 219
>At1g74190.1 68414.m08592 leucine-rich repeat family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 421 DCSGYGLTEFPTPLDVRTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSV 597
+ SG EF L++R LNL +N L+G IPK ++S + G +
Sbjct: 790 ELSGEIPVEFGGLLELRA--LNLSHNNLSGVIPKSISSMEKMESFDLSFNRLQGRIPSQL 847
Query: 598 SELPGLTVLKLGNNRL 645
+EL L+V K+ +N L
Sbjct: 848 TELTSLSVFKVSHNNL 863
>At4g22730.1 68417.m03279 leucine-rich repeat transmembrane protein
kinase, putative leucine rich repeat receptor-like
kinase, Oryza sativa, PATCHX:E267533
Length = 688
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 469 RTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRL 645
+ +L+LQ+NKLTG +P + + +++GL +++ +P L L L NN L
Sbjct: 165 KLNVLSLQHNKLTGEVPWTLGNLSMLSRLDLSFNNLLGLIPKTLANIPQLDTLDLRNNTL 224
Query: 646 IEY-PQDLK 669
+ P LK
Sbjct: 225 SGFVPPGLK 233
>At3g11330.1 68416.m01378 leucine-rich repeat family protein
Length = 499
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +1
Query: 478 ILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEYP 657
+LNL NNKL IP +A S+ L S+ L L +L + N+L P
Sbjct: 225 VLNLSNNKLESIPDSIAGLHSLVELDVSTNSLETLP-DSIGLLSKLKILNVSTNKLTSLP 283
Query: 658 QDLKNGFSLTKLE 696
+ SL L+
Sbjct: 284 DSICRCGSLVILD 296
>At3g02130.1 68416.m00180 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profile: Eukaryotic
protein kinase domain
Length = 985
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 604 LPGLTVLKLGNNRLI-EYPQDLKNGFSLTKLEELDLGGNDI 723
L L V+ LG NR+ E P L+N LTKLE L+LGGN +
Sbjct: 25 LRNLRVMNLGFNRVSGEIPNSLQN---LTKLEILNLGGNKL 62
>At2g33050.1 68415.m04053 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 800
Score = 33.1 bits (72), Expect = 0.21
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +1
Query: 481 LNLQNNKLTG--IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEY 654
LNL +N T +P + ++ S G S+S L LT L L +N L
Sbjct: 95 LNLSHNNFTSSSLPSEFSNLTRLEVLSLASSSFTGQVPSSISNLILLTHLNLSHNELTGS 154
Query: 655 PQDLKNGFSLTKLEELDLGGNDIRTALTTDL 747
++N LTKL LDL N A+ DL
Sbjct: 155 FPPVRN---LTKLSFLDLSYNQFSGAIPFDL 182
>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
protein kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 32.7 bits (71), Expect = 0.27
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Frame = +1
Query: 436 GLT-EFPTPLDVRTTI-LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSEL 606
GLT E P + + L+L N LTG IP + + + G + +L
Sbjct: 270 GLTGEIPKSISATNLVFLDLSANNLTGSIPVSIGNLTKLQVLNLFNNKLTGEIPPVIGKL 329
Query: 607 PGLTVLKLGNNRLI-EYPQDLKNGFSLTKLEELDLGGNDIRTALTTDL 747
PGL K+ NN+L E P ++ G +KLE ++ N + L +L
Sbjct: 330 PGLKEFKIFNNKLTGEIPAEI--GVH-SKLERFEVSENQLTGKLPENL 374
>At4g09430.1 68417.m01553 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1039
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/43 (46%), Positives = 24/43 (55%)
Frame = +1
Query: 592 SVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGND 720
S S P LT LKL N + E PQD+ L L ++DL GND
Sbjct: 763 SFSSFPCLTELKLINLSIREIPQDID---CLLSLRKMDLTGND 802
>At2g33080.1 68415.m04056 leucine-rich repeat family protein
contains leucine rich-repeat domain Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 740
Score = 32.7 bits (71), Expect = 0.27
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +1
Query: 481 LNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEYPQ 660
LNL N TG +V++ G L +S+L L L+L I YP
Sbjct: 201 LNLYGNHFTG-SIEVSTSSKLEILYLGLKPFEGQILEPISKLINLKRLELSFLN-ISYPL 258
Query: 661 DLKNGFSLTKLEELDLGGNDIR-TALTTDLF 750
DL SL L LDL GN I +L +DL+
Sbjct: 259 DLNLFSSLKSLTYLDLSGNSISPRSLRSDLY 289
>At1g15740.1 68414.m01888 leucine-rich repeat family protein
Length = 585
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 595 VSELPGLTVLKLGNNRL----IEYPQDLKNGFSLTKLEELDLGGNDIRTALTTDL 747
+S L GL L + N+R+ + + + LKN SLT LE L NDIR TDL
Sbjct: 523 ISGLTGLVSLNVSNSRVSSSGLRHLKPLKNLRSLT-LESCKLSANDIRKLQATDL 576
>At4g20270.1 68417.m02961 leucine-rich repeat transmembrane protein
kinase, putative CLAVATA1 receptor kinase, Arabidopsis
th., PATX:G2160756
Length = 992
Score = 32.3 bits (70), Expect = 0.36
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = +1
Query: 475 TILNLQNNKLTG-IPKDVASXXXXXXXXXXXXS---IMGLDLGSVSELPGLTVLKLGNNR 642
++L LQNN LTG IP++ A S + G GS+ L L +L LG NR
Sbjct: 442 SLLELQNNFLTGEIPEEEAGNAQFSSLTQINLSNNRLSGPIPGSIRNLRSLQILLLGANR 501
Query: 643 LI-EYPQDLKNGFSLTKLE 696
L + P ++ + SL K++
Sbjct: 502 LSGQIPGEIGSLKSLLKID 520
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-EY 654
L+L NN L G IP +++ + G VSELP L +LKL +N +
Sbjct: 300 LDLSNNFLEGEIPLELSGLQKLQLFNLFFNRLHGEIPEFVSELPDLQILKLWHNNFTGKI 359
Query: 655 PQDL-KNGFSLTKLEELDLGGNDI 723
P L NG L E+DL N +
Sbjct: 360 PSKLGSNG----NLIEIDLSTNKL 379
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/85 (27%), Positives = 37/85 (43%)
Frame = +1
Query: 469 RTTILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI 648
R +L++ +N LT +P + S + L + L L +LK NNR+
Sbjct: 726 RLMLLSISHNNLTVLPSAMGSLTSLRQLDVTNNKLTSLP-NELGLLTQLEILKANNNRIT 784
Query: 649 EYPQDLKNGFSLTKLEELDLGGNDI 723
P+ + N + L E+DL N I
Sbjct: 785 SLPESIGN---CSFLMEVDLSANII 806
>At2g15300.1 68415.m01745 leucine-rich repeat transmembrane protein
kinase, putative
Length = 744
Score = 32.3 bits (70), Expect = 0.36
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
Frame = +1
Query: 418 VDCSGYGLTEFPTPLDVRTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGS 594
V C+ G+ TP R T L L N +L G + D+ S G S
Sbjct: 62 VTCTELGIPN--TPDMFRVTSLVLPNKQLLGSVSPDLFSILHLRILDLSDNFFHGSLPDS 119
Query: 595 VSELPGLTVLKLGNNRLI-EYPQDLKNGFSLTKLEELDLGGNDIRTALTTDL 747
VS L +L LGNN++ E P+ + N + L+ L+L N + + +L
Sbjct: 120 VSNASELRILSLGNNKVSGELPRSISN---VASLQLLNLSANALTGKIPPNL 168
>At5g19680.1 68418.m02341 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 328
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +1
Query: 595 VSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGNDIR 726
+ L L +L+LG+NRL ++L+N TKLEEL LG N I+
Sbjct: 150 IEHLHNLQILELGSNRL-RVMENLEN---FTKLEELWLGRNRIK 189
>At4g39400.1 68417.m05577 brassinosteroid insensitive 1 (BRI1)
identical to GI:2392895
Length = 1196
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 586 LGSVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGNDIRTA 732
L S+ GL L + +N L ++P + G L LE LDL N I A
Sbjct: 141 LTSLGSCSGLKFLNVSSNTL-DFPGKVSGGLKLNSLEVLDLSANSISGA 188
>At1g33670.1 68414.m04165 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to receptor kinase-like
protein GB:AAB82755 GI:2586083 from [Oryza
longistaminata] (Science 270 (5243), 1804-1806 (1995))
Length = 455
Score = 31.9 bits (69), Expect = 0.48
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 487 LQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIE-YPQ 660
L+NN+L+G +P ++ + G S+S+L L LKL NRL +P
Sbjct: 135 LENNRLSGPLPANIGALSNLEILSVAGNRFSGSIPSSMSKLTSLLQLKLNGNRLSGIFPD 194
Query: 661 DLKNGFSLTKLEELDLGGNDIRTALTTDLFS 753
K S+ +L LDL N L + + S
Sbjct: 195 IFK---SMRQLRFLDLSSNRFSGNLPSSIAS 222
>At4g26050.1 68417.m03750 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeat domains;
Length = 383
Score = 31.5 bits (68), Expect = 0.63
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +1
Query: 418 VDCSGYGLTEFPTPLDVRTTI--LNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLG 591
++ SG L P ++ ++ LN N+LT +P + + + L
Sbjct: 132 LNVSGNYLQSLPKTIEDCRSLEELNANFNELTRLPDAIGFELTNLTKLSVNSNKLVLLPN 191
Query: 592 SVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGN 717
SVS L L VL NRL P+DL+N L L+ L++ N
Sbjct: 192 SVSYLTSLRVLDARLNRLSSLPEDLEN---LVNLQVLNVSQN 230
>At3g28040.1 68416.m03500 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00560 leucine
rich repeat, PF00069 eukaryotic protein kinase domain
Length = 1016
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 583 DLGSVSELPGLTVLKLGNNRLI-EYPQDLKNGFSLTKLEELDLGGNDIRTALTTDLFSN 756
++ ++S L L L +N L + P L S+T L+ LDL GN L+ DLF+N
Sbjct: 116 NINALSNNNHLQKLDLSHNNLSGQIPSSLG---SITSLQHLDLTGNSFSGTLSDDLFNN 171
>At3g23110.1 68416.m02913 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 835
Score = 31.5 bits (68), Expect = 0.63
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +1
Query: 469 RTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRL 645
+ T L++ N L G IPK +++ + G S+S+L L L L +N
Sbjct: 281 KLTELDVSYNNLDGLIPKSISTLVSLEHLELSHNNFRGQVPSSISKLVNLDGLYLSHNNF 340
Query: 646 I-EYPQDLKNGFSLTKLEELDLGGND 720
+ P + F L LE LDL ND
Sbjct: 341 GGQVPSSI---FKLVNLEHLDLSHND 363
>At2g15080.2 68415.m01719 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 983
Score = 31.1 bits (67), Expect = 0.84
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 580 LDLGSVSELPGLTVLKLGNNRLIEYPQDLKNGFS-LTKLEELDLGGNDIRTALTTDLFSN 756
L G++S LTVL+LGNN + + S L L+ELDL + + + +FS+
Sbjct: 392 LGFGNISSYSNLTVLRLGNN---NFRGPIHRSISKLVNLKELDLSNYNTQGLVDFTIFSH 448
>At2g15080.1 68415.m01718 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 983
Score = 31.1 bits (67), Expect = 0.84
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 580 LDLGSVSELPGLTVLKLGNNRLIEYPQDLKNGFS-LTKLEELDLGGNDIRTALTTDLFSN 756
L G++S LTVL+LGNN + + S L L+ELDL + + + +FS+
Sbjct: 392 LGFGNISSYSNLTVLRLGNN---NFRGPIHRSISKLVNLKELDLSNYNTQGLVDFTIFSH 448
>At5g49750.1 68418.m06162 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 493
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 493 NNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEYPQDLK 669
NN+ TG IP+ ++ + G S++ L L L L NN+ + L
Sbjct: 284 NNQFTGKIPESLSLVTTLLVLRLDTNRLSGDIPPSLNNLTSLNQLHLCNNK---FTGSLP 340
Query: 670 NGFSLTKLEELDLGGNDIRTAL 735
N SLT L+E+D+ N + +L
Sbjct: 341 NLASLTDLDEIDVSNNTLEFSL 362
>At2g31880.1 68415.m03895 leucine-rich repeat transmembrane protein
kinase, putative
Length = 641
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEYP 657
L L NN+L +P D+ S G G+ S L L +L L +N+L
Sbjct: 116 LTLSNNQLVNAVPVDILSCKQLEVLDLRKNRFSGQIPGNFSSLSRLRILDLSSNKLSGNL 175
Query: 658 QDLKNGFSLTKLEELDLGGN 717
LKN L LE L + N
Sbjct: 176 NFLKN---LRNLENLSVANN 192
>At1g73070.1 68414.m08449 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to receptor-like
protein kinase INRPK1 [Ipomoea nil]
gi|14495542|gb|AAB36558
Length = 598
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +1
Query: 412 FVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDL 588
FV + S G +F + L+L N+ G +P ++ + ++ G
Sbjct: 247 FVANNSLRGTVQFGSTKCRNLVTLDLSYNEFEGGVPPELGNCSSLDALVIVSGNLSGTIP 306
Query: 589 GSVSELPGLTVLKLGNNRLI-EYPQDLKNGFSLTKLE 696
S+ L LT+L L NRL P +L N SL L+
Sbjct: 307 SSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLK 343
>At3g11080.1 68416.m01339 disease resistance family protein contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 943
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +1
Query: 478 ILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-E 651
+L+L N L G IP + + +GL S+ L LT L L +N+ +
Sbjct: 129 VLDLTQNDLDGEIPSSIGNLSHLTSLHLSYNQFLGLIPSSIENLSRLTSLHLSSNQFSGQ 188
Query: 652 YPQDLKNGFSLTKLE 696
P + N LT LE
Sbjct: 189 IPSSIGNLSHLTSLE 203
>At2g32680.1 68415.m03995 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 890
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 652 YPQDLKNGFSLTKLEELDLGGNDIRTA-LTTDLF 750
YP DLK SL L LDL GN I +A L++D +
Sbjct: 354 YPIDLKLFSSLKSLRSLDLSGNSISSASLSSDSY 387
>At2g13790.1 68415.m01522 leucine-rich repeat family protein /
protein kinase family protein
Length = 620
Score = 30.3 bits (65), Expect = 1.5
Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
Frame = +1
Query: 349 QSGDSTCPKPCVC-HTEGDSSNFV--VDCSGYGLTEFPTP---LDVRTTILNLQNNKLTG 510
QS D+T PC H + N V VD L+ P + L L +N +TG
Sbjct: 54 QSWDATLVTPCTWFHVTCNPENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYSNNITG 113
Query: 511 -IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-EYPQDLKNGFSL 684
IP+++ SI G S+ +L L L+L NN L E P L +
Sbjct: 114 EIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTS---- 169
Query: 685 TKLEELDLGGN 717
+L+ LD+ N
Sbjct: 170 VQLQVLDISNN 180
>At1g68400.1 68414.m07814 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GB:AAA33715
from [Petunia integrifolia]
Length = 670
Score = 30.3 bits (65), Expect = 1.5
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 469 RTTILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI 648
R T L L++ LTG + S ++ G + ++S L L +L L NN+
Sbjct: 69 RVTRLVLEDINLTGSISSLTSLTSLRVLSLKHNNLSG-PIPNLSNLTALKLLFLSNNQFS 127
Query: 649 -EYPQDLKNGFSLTKLEELDLGGNDIRTALTTDL 747
+P + SLT+L LDL N+ + DL
Sbjct: 128 GNFPTSIT---SLTRLYRLDLSFNNFSGQIPPDL 158
>At1g12460.1 68414.m01440 leucine-rich repeat transmembrane protein
kinase, putative
Length = 882
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRL 645
L+ +N+LTG IP V + G GS+ ++ L+V++LGNN +
Sbjct: 289 LDASSNELTGRIPTGVMGCKSLKLLDLESNKLNGSIPGSIGKMESLSVIRLGNNSI 344
>At4g28380.1 68417.m04062 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to extensin-like
protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979
Length = 391
Score = 29.9 bits (64), Expect = 1.9
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Frame = +1
Query: 424 CSGYGLTEFPTPLDVRTTI---LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLG 591
CS G+ P+P + T + ++L + + G +P+ + G+
Sbjct: 73 CSYTGIFCAPSPSNPNTLVVAGIDLNHGDIAGFLPEAIGLLSDLALIHLNSNRFCGILPR 132
Query: 592 SVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGNDIRTALTTDLFSN 756
S + L L L L NNR + D+ +L L+ LDL N+ L LFSN
Sbjct: 133 SFANLSLLYELDLSNNRFVGPFPDVV--LALPSLKYLDLRYNEFEGPLPPKLFSN 185
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 481 LNLQNNKLTGI-PKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEYP 657
+NL N +TG+ P D + I G +++L + +L+L NN L
Sbjct: 456 MNLSRNHITGVVPGDFGNLRSIMEIDLSNNDISGPIPEELNQLQNIILLRLENNNLTGNV 515
Query: 658 QDLKNGFSLTKL 693
L N SLT L
Sbjct: 516 GSLANCLSLTVL 527
>At1g73080.1 68414.m08450 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor protein kinase
GI:1389566 from [Arabidopsis thaliana]
Length = 1123
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 418 VDCSGYGLT-EFPTPLD--VRTTILNLQNNKLTG 510
+D SG GLT E P L ++ T LN+ NN LTG
Sbjct: 656 LDLSGNGLTGEIPAKLGDLIKLTRLNISNNNLTG 689
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 2/97 (2%)
Frame = +1
Query: 412 FVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDL 588
FV + S G F +P L+L N+ G +P + + ++ G
Sbjct: 249 FVGNNSLQGPVRFGSPNCKNLLTLDLSYNEFEGGVPPALGNCSSLDALVIVSGNLSGTIP 308
Query: 589 GSVSELPGLTVLKLGNNRLI-EYPQDLKNGFSLTKLE 696
S+ L LT+L L NRL P +L N SL L+
Sbjct: 309 SSLGMLKNLTILNLSENRLSGSIPAELGNCSSLNLLK 345
>At5g51560.1 68418.m06393 leucine-rich repeat transmembrane protein
kinase, putative
Length = 680
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 469 RTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRL 645
+ ++L LQ+NKLTG IP + + G G ++ P L VL + NN L
Sbjct: 168 KLSVLALQSNKLTGAIPASLGDLSALERLDLSYNHLFGSVPGKLASPPLLRVLDIRNNSL 227
>At5g40170.1 68418.m04875 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-4 [Lycopersicon
hirsutum] gi|2808683|emb|CAA05268
Length = 792
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 592 SVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGNDIRTALTTDLFS 753
S+S L LT L L N+L + N SLT LE +DL N A+ + LF+
Sbjct: 158 SISNLSRLTNLDLSYNKLTG---GIPNLHSLTLLENIDLSYNKFSGAIPSYLFT 208
>At4g39270.2 68417.m05561 leucine-rich repeat transmembrane protein
kinase, putative receptor protein kinase erecta,
Arabidopsis thaliana
Length = 694
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +1
Query: 475 TILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI- 648
+IL+L +N + G IP ++ + ++ S+ +L L L L N +
Sbjct: 177 SILDLSSNSVFGSIPANIGALSKLQRLNLSRNTLTSSIPPSLGDLSVLIDLDLSFNGMSG 236
Query: 649 EYPQDLKNGFSLTKLEELDLGGNDIRTALTTDLFS 753
P DLK L L+ L + GN + +L DLFS
Sbjct: 237 SVPSDLKG---LRNLQTLVIAGNRLSGSLPPDLFS 268
>At4g39270.1 68417.m05562 leucine-rich repeat transmembrane protein
kinase, putative receptor protein kinase erecta,
Arabidopsis thaliana
Length = 864
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +1
Query: 475 TILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI- 648
+IL+L +N + G IP ++ + ++ S+ +L L L L N +
Sbjct: 177 SILDLSSNSVFGSIPANIGALSKLQRLNLSRNTLTSSIPPSLGDLSVLIDLDLSFNGMSG 236
Query: 649 EYPQDLKNGFSLTKLEELDLGGNDIRTALTTDLFS 753
P DLK L L+ L + GN + +L DLFS
Sbjct: 237 SVPSDLKG---LRNLQTLVIAGNRLSGSLPPDLFS 268
>At3g47580.1 68416.m05180 leucine-rich repeat transmembrane protein
kinase, putative protein kinase Xa21 - Oryza sativa,
PIR:A57676
Length = 1011
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +1
Query: 481 LNLQNNKLTGI-PKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIE-Y 654
L+L +N GI P++V + S+ G ++S L L L +N L +
Sbjct: 95 LDLSDNAFGGIIPREVGNLFRLEHLYMAFNSLEGGIPATLSNCSRLLNLDLYSNPLRQGV 154
Query: 655 PQDLKNGFSLTKLEELDLGGNDIRTALTTDL 747
P +L SLTKL LDLG N+++ L L
Sbjct: 155 PSELG---SLTKLVILDLGRNNLKGKLPRSL 182
>At1g66150.1 68414.m07508 leucine-rich repeat protein kinase,
putative (TMK1) identical to protein kinase TMK1
gi|166888|gb|AAA32876, SP|P43298 Putative receptor
protein kinase TMK1 precursor (EC 2.7.1.-) {Arabidopsis
thaliana}
Length = 942
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 592 SVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGNDIRT 729
S+S L L VL L NN P D+ G LT L+ +++ N ++
Sbjct: 106 SLSGLASLQVLMLSNNNFDSIPSDVFQG--LTSLQSVEIDNNPFKS 149
>At1g17240.1 68414.m02100 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Hcr2-0B [Lycopersicon
esculentum] gi|3894387|gb|AAC78593
Length = 729
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 469 RTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRL 645
+ T L L +N L G IP D+ + +I G S++ L L L N+L
Sbjct: 294 KLTSLALYSNHLEGEIPMDIGNLSSLRSLQLHINNINGTVPLSLANCTKLVKLNLRVNQL 353
Query: 646 IEYPQDLKNGFSLTKLEELDLGGNDIRTALTTDLFS 753
+L+ L L+ LDLG N AL +FS
Sbjct: 354 GGGLTELEFS-QLQSLKVLDLGNNSFTGALPDKIFS 388
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Frame = +1
Query: 409 NFVVDCSGYGLTEFPTPLDVRTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLD 585
N V+ G GLTE +L+L NN TG +P + S + G
Sbjct: 347 NLRVNQLGGGLTELEFSQLQSLKVLDLGNNSFTGALPDKIFSCKSLTAIRFAGNKLTGEI 406
Query: 586 LGSVSELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGN 717
V EL L+ + L +N+L L KL L L N
Sbjct: 407 SPQVLELESLSFMGLSDNKLTNITGALSILQGCRKLSTLILAKN 450
>At1g08160.1 68414.m00900 harpin-induced protein-related /
HIN1-related / harpin-responsive protein-related weak
similarity to hin1 [Nicotiana tabacum] GI:1619321
Length = 221
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 712 RLNPALPILLVKIRFSNLVGIQLICYFLVLRP 617
R+NP L I++ + LVG+ ++ +L LRP
Sbjct: 33 RMNPVLCIIVALVLLGLLVGLAILITYLTLRP 64
>At5g61480.1 68418.m07714 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1041
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Frame = +1
Query: 478 ILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-E 651
+L+ +N+L+G IP ++ ++ G + ELP LT L L NN
Sbjct: 301 LLDFSSNQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELPELTTLFLWNNNFTGV 360
Query: 652 YPQDL-KNGFSLTKLEELDLGGNDIRTALTTDL 747
P L NG KLE +D+ N + + L
Sbjct: 361 LPHKLGSNG----KLETMDVSNNSFTGTIPSSL 389
>At4g20940.1 68417.m03034 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to leucine-rich
repeat receptor-like protein kinase INRPK1 [Ipomoea nil]
gi|14495542|gb|AAB36558
Length = 977
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEYP 657
L+L N +G IP+ + S+ G S++ L L L L +N +
Sbjct: 131 LSLSGNNFSGEIPESMGGLISLQSLDMSSNSLSGPLPKSLTRLNDLLYLNLSSNG---FT 187
Query: 658 QDLKNGFSL-TKLEELDLGGNDIRTALTTDLF 750
+ GF L + LE LDL GN I L + F
Sbjct: 188 GKMPRGFELISSLEVLDLHGNSIDGNLDGEFF 219
>At3g53590.1 68416.m05919 leucine-rich repeat transmembrane protein
kinase, putative CLV1 receptor kinase, Arabidopsis
thaliana, EMBL:ATU96879
Length = 783
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNN 639
L+L NN ++G IP +++ ++ G +++LP LT+L+L NN
Sbjct: 70 LHLNNNTISGEIPVELSKLPKLVHMILDNNNLTGTLPLELAQLPSLTILQLDNN 123
>At3g05370.1 68416.m00586 disease resistance family protein contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2 disease resistance
protein GB:AAC15780 from [Lycopersicon pimpinellifolium]
Length = 860
Score = 29.1 bits (62), Expect = 3.4
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +1
Query: 469 RTTILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRL 645
R TIL+L +NKL G +P + + G + S L L V+ L NN
Sbjct: 157 RLTILDLWDNKLVGQLPASIGNLTQLEYLIFSHNKFSGNIPVTFSNLTKLLVVNLYNNSF 216
Query: 646 IE-YPQDLKNGFSLTKLEELDLGGNDIRTALTTDLFS 753
P D+ +GF L+ ++G N L LF+
Sbjct: 217 ESMLPLDM-SGFQ--NLDYFNVGENSFSGTLPKSLFT 250
>At1g33610.1 68414.m04160 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611
Length = 907
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-EY 654
+N+Q L+G +P ++ G S++ L LT L LGNNRL
Sbjct: 584 INIQGCLLSGPLPANIGELSQLKTLVIDGNMFTGHIPSSIANLTRLTWLNLGNNRLSGTI 643
Query: 655 PQDLKNGFSLTKLEELDLGGN 717
P K S+ +L LDL N
Sbjct: 644 PNIFK---SMKELNSLDLSRN 661
>At1g13910.1 68414.m01632 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Hcr2-0A
[Lycopersicon esculentum] gi|3894385|gb|AAC78592
Length = 330
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +1
Query: 475 TILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLG-NNRLI 648
T+L++ NNKLTG IP ++ + + L LT L L NN
Sbjct: 104 TVLDMHNNKLTGPIPPEIGRLKRLITLNLRWNKLQQALPPEIGGLKSLTYLYLSFNNFKG 163
Query: 649 EYPQDLKNGFSLTKLEELDLGGNDIRTALTTDL 747
E P++L N L +L+ L + N + +L
Sbjct: 164 EIPKELAN---LHELQYLHIQENHFTGRIPAEL 193
>At5g07910.1 68418.m00914 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 262
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/82 (28%), Positives = 34/82 (41%)
Frame = +1
Query: 478 ILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEYP 657
+LN+ NN+L +P+ V S + L S+ L L L L NN++ + P
Sbjct: 141 LLNVSNNRLKSLPESVGSCASLEEVQANDNVVEELP-ASLCNLIQLKSLSLDNNQVNQIP 199
Query: 658 QDLKNGFSLTKLEELDLGGNDI 723
L L+ L L N I
Sbjct: 200 DGLL--IHCKSLQNLSLHNNPI 219
>At3g47090.1 68416.m05113 leucine-rich repeat transmembrane protein
kinase, putative receptor kinase-like protein (Xa21),
Oryza longistaminata, U72725
Length = 1009
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEY- 654
L + NKL G IPK++ S+ G + L L L LGNN L +
Sbjct: 463 LQIGYNKLNGTIPKEIMQIPTLVHLNMESNSLSGSLPNDIGRLQNLVELLLGNNNLSGHL 522
Query: 655 PQDLKNGFSL 684
PQ L S+
Sbjct: 523 PQTLGKCLSM 532
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +1
Query: 397 GDSSNFVVDCSGYGLT-EFPTPLDVRTTILN---LQNNKLTG-IPKDVASXXXXXXXXXX 561
G S+ V++ + L+ E PT + + L NN+LTG IP+ V
Sbjct: 225 GYSTASVINLANNKLSGEIPTSFGITGSKLKEVLFLNNQLTGCIPESVGLFSDIEVFDVS 284
Query: 562 XXSIMGLDLGSVSELPGLTVLKLGNNR 642
S+MG ++S L + VL LG+N+
Sbjct: 285 FNSLMGHVPDTISCLSEIEVLNLGHNK 311
>At4g08560.1 68417.m01408 pumilio/Puf RNA-binding domain-containing
protein low similarity to RNA binding protein PufA
[Dictyostelium discoideum] GI:5106561; contains Pfam
profile PF00806: Pumilio-family RNA binding repeat
Length = 477
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -1
Query: 218 SELVSGGN*LSVSTGIGVSSDFIPASQ 138
SE SGG +S S GI S+DF+ ASQ
Sbjct: 106 SERKSGGRTVSGSRGISRSTDFVGASQ 132
>At3g19230.1 68416.m02440 leucine-rich repeat family protein
contains Pfam profile:PF00560 LRR:Leucine Rich Repeat
domains; similar to light repressible receptor protein
kinase (GI:1321686)[Arabidopsis thaliana]
Length = 519
Score = 28.3 bits (60), Expect = 5.9
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Frame = +1
Query: 280 TTLSSAPLLEDVQLTANAEGTATQSGDSTCPKP-----CVCHTEGDSSNFVVDCSGYGLT 444
T + A +ED+ L + + SGD P+ C + + ++ + GL+
Sbjct: 354 TNIKDAIAMEDL-LESIMKPPVDWSGDPCLPRANSWTGLTCSKDKIARVISLNLTNLGLS 412
Query: 445 -EFPTPLDVRTTI--LNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGL 615
P ++ T + L L NKLTG D++ G S+++LP L
Sbjct: 413 GSLPPSINKMTALKDLWLGKNKLTGPIPDLSPMTRLETLHLEDNQFTGAIPESLAKLPSL 472
Query: 616 TVLKLGNNRL 645
L + NN+L
Sbjct: 473 RTLSIKNNKL 482
>At5g05850.1 68418.m00643 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeat domains;
similar to (SP:Q9UQ13) Leucine-rich repeat protein
SHOC-2 (Ras-binding protein Sur-8) (SP:Q9UQ13) {Homo
sapiens}
Length = 506
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +1
Query: 478 ILNLQNNKLTGIPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLIEYP 657
+LNL NN+L IP +A + L S+ L L +L + N+L P
Sbjct: 231 VLNLYNNQLQAIPDSIAGLHNLLELDVSTNFLETLP-DSIGLLSKLKILNVSCNKLTTLP 289
Query: 658 QDLKNGFSLTKLE 696
+ + SL L+
Sbjct: 290 DSICHCGSLVVLD 302
>At4g13810.1 68417.m02140 disease resistance family protein / LRR
family protein contains leucine rich-repeat domains
Pfam:PF00560, INTERPRO:IPR001611; similar to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 741
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 601 ELPGLTVLKLGNNRLIEYPQDLKNGFSLTKLEELDLGGNDIRTALTTDLF 750
+L +T + LG+N+L N SL+KLE D+ GN + + LF
Sbjct: 130 KLSSVTWIDLGDNQLKGMLPS--NMSSLSKLEAFDISGNSFSGTIPSSLF 177
>At3g55950.1 68416.m06217 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; similar to
cytokinin-regulated kinase 1 [Nicotiana tabacum]
gi|10998537|gb|AAG25966
Length = 814
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -1
Query: 611 PGSSLTEPKSKPMIEFLLAFKTFKFLREATSFGIPVSLLFCKFSIVVRTSKGVGNSVSP 435
P S + P SK + LLAF + +F S+++C ++ V K V NSV P
Sbjct: 379 PSPSTSSPPSKALTRGLLAFA---IVGSVGAFAGICSVVYCLWTGVCLGKKKVHNSVQP 434
>At1g63430.1 68414.m07173 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00069
Eukaryotic protein kinase domain, PF00560 Leucine Rich
Repeat; contains 1 predicted transmembrane domain
Length = 664
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +1
Query: 481 LNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMGLDLGSVSELPGLTVLKLGNNRLI-EY 654
L L N L G IPK++ + +MG + L G+ ++ L +N L +
Sbjct: 98 LILHGNILIGTIPKEIGNLKNLKILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKL 157
Query: 655 PQDLKNGFSLTKLEELDLGGNDIRTAL 735
P +L N L L EL + N ++ +L
Sbjct: 158 PAELGN---LKYLRELHIDRNRLQGSL 181
>At1g08590.1 68414.m00952 CLAVATA1 receptor kinase (CLV1) similar to
receptor-like protein kinase (Ipomoea nil) (U77888)
Length = 1029
Score = 27.9 bits (59), Expect = 7.8
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 478 ILNLQNNKLTG-IPKDVASXXXXXXXXXXXXSIMG---LDLGSVSELPGLTVLKLGNNRL 645
+LNL N+LTG IP +A S+MG + LG S L L V +N+L
Sbjct: 321 LLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVHLGKNSPLKWLDV---SSNKL 377
Query: 646 I-EYPQDLKNGFSLTKL 693
+ P L +LTKL
Sbjct: 378 SGDIPSGLCYSRNLTKL 394
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,911,269
Number of Sequences: 28952
Number of extensions: 283196
Number of successful extensions: 902
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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