Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30605
(718 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q95UN2 Cluster: Ribosomal protein L20; n=5; Endopterygo... 265 6e-70
UniRef50_Q9VU36 Cluster: CG11258-PA; n=2; Sophophora|Rep: CG1125... 160 3e-38
UniRef50_UPI00015B459F Cluster: PREDICTED: similar to GA10871-PA... 147 2e-34
UniRef50_UPI0000E4A60B Cluster: PREDICTED: similar to LOC495406 ... 122 9e-27
UniRef50_Q9BYC9 Cluster: 39S ribosomal protein L20, mitochondria... 113 5e-24
UniRef50_A7SCU5 Cluster: Predicted protein; n=1; Nematostella ve... 105 1e-21
UniRef50_A7L699 Cluster: Ribosomal protein L20; n=1; Artemia fra... 102 1e-20
UniRef50_Q8LCN1 Cluster: 50S ribosomal protein L20; n=4; cellula... 85 2e-15
UniRef50_O21274 Cluster: Ribosomal protein L20; n=1; Reclinomona... 81 2e-14
UniRef50_Q5LMG5 Cluster: 50S ribosomal protein L20; n=31; cellul... 79 1e-13
UniRef50_Q6NDR6 Cluster: 50S ribosomal protein L20; n=57; Bacter... 77 3e-13
UniRef50_Q1AWG1 Cluster: 50S ribosomal protein L20; n=3; Bacteri... 77 4e-13
UniRef50_A6PRM9 Cluster: 50S ribosomal protein L20; n=1; Victiva... 75 2e-12
UniRef50_Q8R9C4 Cluster: 50S ribosomal protein L20; n=44; Bacter... 74 4e-12
UniRef50_A6G4V9 Cluster: 50S ribosomal protein L20; n=1; Plesioc... 73 5e-12
UniRef50_Q86EX6 Cluster: Clone ZZD1328 mRNA sequence; n=1; Schis... 73 5e-12
UniRef50_Q9PFD8 Cluster: 50S ribosomal protein L20; n=59; cellul... 73 7e-12
UniRef50_P66112 Cluster: 50S ribosomal protein L20; n=63; Bacter... 72 1e-11
UniRef50_Q92ST1 Cluster: 50S ribosomal protein L20; n=63; Bacter... 72 1e-11
UniRef50_Q2GAJ0 Cluster: 50S ribosomal protein L20; n=18; Bacter... 70 5e-11
UniRef50_P66106 Cluster: 50S ribosomal protein L20; n=113; cellu... 70 7e-11
UniRef50_A3ZLR5 Cluster: 50S ribosomal protein L20; n=2; Plancto... 69 9e-11
UniRef50_Q86JU8 Cluster: Similar to Oryza sativa (Rice), and Ory... 69 9e-11
UniRef50_Q73KR3 Cluster: 50S ribosomal protein L20; n=3; Bacteri... 69 9e-11
UniRef50_Q8ZDW8 Cluster: 50S ribosomal protein L20; n=127; Bacte... 69 1e-10
UniRef50_Q7MVQ8 Cluster: 50S ribosomal protein L20; n=11; Bacter... 69 1e-10
UniRef50_A7CZ03 Cluster: Ribosomal protein L20; n=1; Opitutaceae... 69 2e-10
UniRef50_Q6KH18 Cluster: 50S ribosomal protein L20; n=31; Bacter... 66 1e-09
UniRef50_O51206 Cluster: 50S ribosomal protein L20; n=4; Bacteri... 65 1e-09
UniRef50_Q9NWH4 Cluster: CDNA FLJ10024 fis, clone HEMBA1000636; ... 65 2e-09
UniRef50_Q8FTQ0 Cluster: 50S ribosomal protein L20; n=97; Bacter... 64 2e-09
UniRef50_A0CDN7 Cluster: Chromosome undetermined scaffold_17, wh... 64 3e-09
UniRef50_A7ANI5 Cluster: Ribosomal protein L20, putative; n=3; P... 63 8e-09
UniRef50_Q1JT29 Cluster: Ribosomal protein l20, putative; n=6; A... 62 1e-08
UniRef50_Q9AMG2 Cluster: 50S ribosomal protein L20; n=13; Bacter... 62 1e-08
UniRef50_Q235I3 Cluster: Ribosomal protein L20 containing protei... 62 1e-08
UniRef50_Q8F6Q7 Cluster: 50S ribosomal protein L20; n=6; Bacteri... 62 2e-08
UniRef50_Q9X1S8 Cluster: 50S ribosomal protein L20; n=15; Bacter... 61 3e-08
UniRef50_A2WUT3 Cluster: Putative uncharacterized protein; n=2; ... 59 1e-07
UniRef50_Q9NAG2 Cluster: Putative uncharacterized protein; n=2; ... 53 6e-06
UniRef50_UPI0000E1E5AE Cluster: PREDICTED: similar to mitochondr... 53 8e-06
UniRef50_Q9FWQ8 Cluster: Putative 50S ribosomal protein L20; n=5... 51 2e-05
UniRef50_UPI0000E1F19F Cluster: PREDICTED: hypothetical protein,... 48 3e-04
UniRef50_P34769 Cluster: Plastid 50S ribosomal protein L20; n=1;... 38 0.19
UniRef50_P56794 Cluster: Chloroplast 50S ribosomal protein L20; ... 36 1.3
UniRef50_UPI0000E87F2E Cluster: Glutamate-ammonia ligase adenyly... 35 2.3
UniRef50_Q2EEV4 Cluster: 50S ribosomal protein L20; n=1; Helicos... 33 5.3
UniRef50_Q871S3 Cluster: Putative uncharacterized protein 7F4.15... 33 7.0
UniRef50_Q1E1J4 Cluster: Predicted protein; n=1; Coccidioides im... 33 7.0
>UniRef50_Q95UN2 Cluster: Ribosomal protein L20; n=5;
Endopterygota|Rep: Ribosomal protein L20 - Spodoptera
frugiperda (Fall armyworm)
Length = 159
Score = 265 bits (650), Expect = 6e-70
Identities = 122/156 (78%), Positives = 135/156 (86%)
Frame = +2
Query: 200 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 379
MVFL++ NW R RGPDEFWRKRR+FRLAAHYIGRRRNCYS+ VRNVHRALVYATKARKLK
Sbjct: 1 MVFLTIANWVRSRGPDEFWRKRRMFRLAAHYIGRRRNCYSVTVRNVHRALVYATKARKLK 60
Query: 380 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 559
K+DM LW RITAACEQHNIT +L++GLDRANIMLDRKSLSDLA WEP+TFE LAAVA
Sbjct: 61 KQDMIDLWSTRITAACEQHNITPCTLKQGLDRANIMLDRKSLSDLACWEPRTFECLAAVA 120
Query: 560 KYKLETDRFIDGQDKCHPTGINLNLKDVMLEAWLNE 667
K K+E D ID DK +PTG+NL L+DVMLEAWL E
Sbjct: 121 KQKMEYDGAIDYTDKKYPTGVNLKLQDVMLEAWLKE 156
>UniRef50_Q9VU36 Cluster: CG11258-PA; n=2; Sophophora|Rep:
CG11258-PA - Drosophila melanogaster (Fruit fly)
Length = 150
Score = 160 bits (389), Expect = 3e-38
Identities = 72/131 (54%), Positives = 96/131 (73%)
Frame = +2
Query: 200 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 379
MVFL++ R RGPDEFWRKRR+F+LAAHY R RN YS A+R+VHRAL YATK RKLK
Sbjct: 1 MVFLNLPLLVRSRGPDEFWRKRRIFKLAAHYRSRTRNVYSFAIRSVHRALAYATKGRKLK 60
Query: 380 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 559
K DM LW R+ A C+Q+ + L + +EGL R++I+L++K LSDLA WEP++FEAL ++
Sbjct: 61 KLDMAQLWSTRVEAGCQQYGVGLETFKEGLARSDILLNKKVLSDLAIWEPRSFEALVKIS 120
Query: 560 KYKLETDRFID 592
+ + + D
Sbjct: 121 RERAAVEGMPD 131
>UniRef50_UPI00015B459F Cluster: PREDICTED: similar to GA10871-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA10871-PA - Nasonia vitripennis
Length = 147
Score = 147 bits (357), Expect = 2e-34
Identities = 67/127 (52%), Positives = 93/127 (73%)
Frame = +2
Query: 200 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 379
MVF SV +AR RGPDEFWRKR++FRL+AH+ R RNCYS+AVR VHR+L ++TK R K
Sbjct: 1 MVFQSVTLFARSRGPDEFWRKRKIFRLSAHFRNRYRNCYSLAVRAVHRSLQFSTKHRDPK 60
Query: 380 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 559
++ ++ +W RI A +H + L+EGL R I+LDRKSL++LA WEP+TF++L +A
Sbjct: 61 RKWIREIWQTRIEAGSIEHGLNYKILKEGLTRCEILLDRKSLAELAVWEPRTFKSLVKIA 120
Query: 560 KYKLETD 580
+L+ D
Sbjct: 121 CARLKQD 127
>UniRef50_UPI0000E4A60B Cluster: PREDICTED: similar to LOC495406
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495406 protein -
Strongylocentrotus purpuratus
Length = 167
Score = 122 bits (294), Expect = 9e-27
Identities = 60/123 (48%), Positives = 79/123 (64%)
Frame = +2
Query: 200 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 379
MV LS++ R RGPD +WRKR + Y GRRRNC+S+AVR V RA +T RK K
Sbjct: 1 MVHLSLVRMIRSRGPDRYWRKRFYLDQSTQYFGRRRNCFSVAVRAVRRAWQNSTAGRKKK 60
Query: 380 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 559
K M+ LW++RI+AA ++H +T L + NI LDRK LS +A +EPKTF+ LA +A
Sbjct: 61 KGQMRRLWNLRISAAVQEHGLTYGPFIGNLLKHNIRLDRKVLSHIAIYEPKTFKCLAELA 120
Query: 560 KYK 568
K
Sbjct: 121 SQK 123
>UniRef50_Q9BYC9 Cluster: 39S ribosomal protein L20, mitochondrial
precursor; n=15; Euteleostomi|Rep: 39S ribosomal protein
L20, mitochondrial precursor - Homo sapiens (Human)
Length = 149
Score = 113 bits (271), Expect = 5e-24
Identities = 57/120 (47%), Positives = 81/120 (67%)
Frame = +2
Query: 200 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 379
MVFL+ W R R D ++R + V + A H+ GR+ CY +AVR V RA V TKAR LK
Sbjct: 1 MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLK 60
Query: 380 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 559
K++M++LW RITAA ++H + +L L + + L+RK L+DLA +EPKTF++LAA+A
Sbjct: 61 KKNMRTLWINRITAASQEHGLKYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSLAALA 120
>UniRef50_A7SCU5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 125
Score = 105 bits (252), Expect = 1e-21
Identities = 52/113 (46%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Frame = +2
Query: 239 GP-DEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRI 415
GP D ++ R+F LA + GR +NCYSIA+R V +AL Y +R+LKK DM+SLW RI
Sbjct: 5 GPADRAVKRARIFALAKGFRGRSKNCYSIAIRRVQKALQYQYTSRRLKKRDMRSLWITRI 64
Query: 416 TAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLE 574
A +HNI +L + + +I L+RK LS++A EP++F+ LA++AK +LE
Sbjct: 65 NIAGREHNINYSTLVHKMAKLDIQLNRKMLSEIAIHEPRSFKGLASLAKRRLE 117
>UniRef50_A7L699 Cluster: Ribosomal protein L20; n=1; Artemia
franciscana|Rep: Ribosomal protein L20 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 106
Score = 102 bits (244), Expect = 1e-20
Identities = 50/106 (47%), Positives = 72/106 (67%)
Frame = +2
Query: 200 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 379
MVF + AR R D++W++RR+F+L+AH+ GR+RNCYS+AVR VHRA Y T +RKLK
Sbjct: 1 MVFTCTVLCAR-RDFDKYWKRRRIFQLSAHFEGRKRNCYSVAVRYVHRAFAYTTNSRKLK 59
Query: 380 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLA 517
K+ ++ W RI A + T +L GL R +I L+ ++LS+LA
Sbjct: 60 KKAVRRRWIDRIHAGAAEFGSTYEALITGLGRCHISLNHQTLSNLA 105
>UniRef50_Q8LCN1 Cluster: 50S ribosomal protein L20; n=4; cellular
organisms|Rep: 50S ribosomal protein L20 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 126
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/101 (40%), Positives = 62/101 (61%)
Frame = +2
Query: 260 KRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQHN 439
K+ +F+LA + GR +NC IA V +AL Y+ + R+ KK +M+ LW RI A QH
Sbjct: 3 KKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIERINAGSRQHG 62
Query: 440 ITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAK 562
+ + GL + NI L+RK LS+L+ EP +F+AL V++
Sbjct: 63 VNYGNFIHGLMKENIQLNRKVLSELSMHEPYSFKALVDVSR 103
>UniRef50_O21274 Cluster: Ribosomal protein L20; n=1; Reclinomonas
americana|Rep: Ribosomal protein L20 - Reclinomonas
americana
Length = 115
Score = 81.4 bits (192), Expect = 2e-14
Identities = 40/97 (41%), Positives = 56/97 (57%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R +++ + A Y GR +NC+SIA+ VH+ L YA RK+ K +++W RI AAC
Sbjct: 13 RHKKIIKNATGYRGRSKNCFSIAIEKVHKGLQYAYAHRKVNKRFFRNVWIQRINAACTTS 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEAL 547
I S L NI L+RK LS LA EP TF+++
Sbjct: 73 QINYSSFIHNLSLQNIQLNRKILSTLAITEPYTFQSI 109
>UniRef50_Q5LMG5 Cluster: 50S ribosomal protein L20; n=31; cellular
organisms|Rep: 50S ribosomal protein L20 - Silicibacter
pomeroyi
Length = 121
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R ++V + A Y GRR++ + +A + V +A YAT+ RK +K + ++LW RI AA H
Sbjct: 13 RHKKVLKAAKGYYGRRKSSFKVATQAVDKANQYATRDRKARKRNFRALWIQRINAAVRSH 72
Query: 437 N--ITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
+ +T GL+ A I +DRK L+DLA EP+ F A+ A A+ L
Sbjct: 73 DEALTYSRFINGLNLAGIEVDRKVLADLAVHEPEAFGAIVAQAQAAL 119
>UniRef50_Q6NDR6 Cluster: 50S ribosomal protein L20; n=57;
Bacteria|Rep: 50S ribosomal protein L20 -
Rhodopseudomonas palustris
Length = 119
Score = 77.4 bits (182), Expect = 3e-13
Identities = 44/112 (39%), Positives = 62/112 (55%)
Frame = +2
Query: 236 RGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRI 415
RG + ++V++LA Y GRR+N A V +A YA + RK KK ++LW R+
Sbjct: 6 RGVTAHAKHKKVYKLAKGYRGRRKNTIRTAKAAVDKAGQYAFRDRKRKKRTFRALWIQRL 65
Query: 416 TAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
AA +T GL ++ I++DRK LSDLA EP F+A+A AK L
Sbjct: 66 NAAVRPFGMTYSVFINGLSKSGIVVDRKVLSDLAINEPAAFQAIAEKAKAAL 117
>UniRef50_Q1AWG1 Cluster: 50S ribosomal protein L20; n=3;
Bacteria|Rep: 50S ribosomal protein L20 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 133
Score = 77.0 bits (181), Expect = 4e-13
Identities = 43/106 (40%), Positives = 59/106 (55%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
++R++ + A Y G + Y A V ++ VYA RK KK D ++LW RI AA +H
Sbjct: 13 KRRKLLKEARGYRGTKHTSYKRAKEQVWKSGVYAYVGRKQKKRDFRALWIQRINAAARRH 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLE 574
++ GL A LDRK L+DLA EP+ F A+AA AK LE
Sbjct: 73 GLSYSRFVHGLRLAGFDLDRKVLADLAVSEPEAFGAVAAQAKNALE 118
>UniRef50_A6PRM9 Cluster: 50S ribosomal protein L20; n=1;
Victivallis vadensis ATCC BAA-548|Rep: 50S ribosomal
protein L20 - Victivallis vadensis ATCC BAA-548
Length = 116
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/97 (41%), Positives = 53/97 (54%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R++R +A + G V +ALV+A K RK KK+ + LW VRI AAC
Sbjct: 13 RRKRTLEMAKGFYGNSSKNIRTVYDAVDKALVHAYKGRKQKKQQYRGLWIVRINAACRAL 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEAL 547
N+ GL +ANI L+RK L+DLA EP F+AL
Sbjct: 73 NVNYSQFMNGLKKANIELNRKVLADLAVNEPAEFKAL 109
>UniRef50_Q8R9C4 Cluster: 50S ribosomal protein L20; n=44;
Bacteria|Rep: 50S ribosomal protein L20 -
Thermoanaerobacter tengcongensis
Length = 119
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/105 (35%), Positives = 60/105 (57%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R +++ +LA Y G + + +A + V ++L+YA RKL+K D + LW RI AA +
Sbjct: 13 RHKKILKLAKGYWGAKSKLFRVANQAVMKSLMYAYIGRKLRKRDFRRLWITRINAAARAY 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
I+ GL +A I ++RK LS++A + K F L +AK +L
Sbjct: 73 GISYSRFINGLKKAGIEINRKMLSEMAIHDEKAFAELVNIAKQQL 117
>UniRef50_A6G4V9 Cluster: 50S ribosomal protein L20; n=1;
Plesiocystis pacifica SIR-1|Rep: 50S ribosomal protein
L20 - Plesiocystis pacifica SIR-1
Length = 117
Score = 73.3 bits (172), Expect = 5e-12
Identities = 40/105 (38%), Positives = 58/105 (55%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R+ R+ + A+ + RR Y +V VH A ++A RK KK M+ LW VRI A Q+
Sbjct: 13 RRNRIRKSASGFREGRRTMYRRSVEAVHHAWMHAYTGRKQKKRTMRRLWIVRINAGARQN 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
+T + G +ANI LDRK L+DLA +P F + +A+ L
Sbjct: 73 GLTYSRMMAGCKKANIELDRKVLADLAIVDPAGFAKVVDLARAAL 117
>UniRef50_Q86EX6 Cluster: Clone ZZD1328 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD1328 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 163
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Frame = +2
Query: 245 DEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAA 424
D ++++ + + A + GR C + V V RA YA R+++++++KSLW R+ A
Sbjct: 19 DRWFKRNNLMKFAFFFKGRTARCPKLGVNRVVRAFQYAKDLREVRRKEIKSLWMERLEIA 78
Query: 425 CEQHNI-TLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAK-YKLE 574
EQ + + +L EGL ++NI L++ L L+ +EP+TF AL ++K Y LE
Sbjct: 79 SEQCGLPSAKALCEGLSQSNIALNKNMLQILSIYEPRTFSALVDLSKQYHLE 130
>UniRef50_Q9PFD8 Cluster: 50S ribosomal protein L20; n=59; cellular
organisms|Rep: 50S ribosomal protein L20 - Xylella
fastidiosa
Length = 119
Score = 72.9 bits (171), Expect = 7e-12
Identities = 42/109 (38%), Positives = 58/109 (53%)
Frame = +2
Query: 236 RGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRI 415
RG R +++ LA Y RR + +A + V +A YA RK KK + +SLW VRI
Sbjct: 6 RGVQARRRHKKILSLAKGYYNARRKVFRVAKQAVIKAQQYAYIGRKQKKRNFRSLWIVRI 65
Query: 416 TAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAK 562
AA + ++ GL + I LDRK L+D+A +P F ALA AK
Sbjct: 66 NAAARINGLSYSRFMNGLLKCGITLDRKVLADIAVHDPAGFTALAEKAK 114
>UniRef50_P66112 Cluster: 50S ribosomal protein L20; n=63;
Bacteria|Rep: 50S ribosomal protein L20 - Streptococcus
pneumoniae
Length = 119
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/105 (37%), Positives = 56/105 (53%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R++R+ +LA Y G + + A V + YA + R+ KK D + LW RI AA +
Sbjct: 13 RRKRILKLAKGYYGAKHILFRTAKEQVMNSYYYAYRDRRQKKRDFRKLWITRINAAARMN 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
++ L GL A I ++RK L+DLA + F ALA AK KL
Sbjct: 73 GLSYSQLMHGLKLAEIEVNRKMLADLAVNDAVAFTALADAAKAKL 117
>UniRef50_Q92ST1 Cluster: 50S ribosomal protein L20; n=63;
Bacteria|Rep: 50S ribosomal protein L20 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 134
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/112 (34%), Positives = 60/112 (53%)
Frame = +2
Query: 236 RGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRI 415
RG + ++ + A + GRR+N A V R+ +A + RK+ K + ++LW RI
Sbjct: 6 RGVTSHAKHKKTLKAAKGFYGRRKNTIRAAKAAVDRSKQFAYRDRKVNKRNFRALWIQRI 65
Query: 416 TAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
AA + +T +GL++A I +DRK LSD+A EP F AL +K L
Sbjct: 66 NAAVREFGLTYGRFIDGLNKAGIEVDRKVLSDMAIHEPAAFGALVEASKKAL 117
>UniRef50_Q2GAJ0 Cluster: 50S ribosomal protein L20; n=18;
Bacteria|Rep: 50S ribosomal protein L20 -
Novosphingobium aromaticivorans (strain DSM 12444)
Length = 120
Score = 70.1 bits (164), Expect = 5e-11
Identities = 42/112 (37%), Positives = 58/112 (51%)
Frame = +2
Query: 236 RGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRI 415
RG + +R+ A Y GRR+N +A + V +A YA + RK+KK ++LW RI
Sbjct: 6 RGVTTRAKHKRILDQAKGYRGRRKNTIRVARQAVEKAGQYAYRDRKVKKRSFRALWIQRI 65
Query: 416 TAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
AA +T G A I LDRK+++DLA E F A+ A AK L
Sbjct: 66 NAAVRAEGLTYSQFIHGAKLAGIELDRKAMADLAMNEGAIFNAVIAQAKAAL 117
>UniRef50_P66106 Cluster: 50S ribosomal protein L20; n=113; cellular
organisms|Rep: 50S ribosomal protein L20 - Mycobacterium
bovis
Length = 129
Score = 69.7 bits (163), Expect = 7e-11
Identities = 37/108 (34%), Positives = 59/108 (54%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
++R + + + Y G+R Y A +L YA + R+ +K + + LW RI AA +
Sbjct: 13 KRRSILKASRGYRGQRSRLYRKAKEQQLHSLNYAYRDRRARKGEFRKLWIARINAAARLN 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETD 580
+IT L +GL A + +DRK+L+D+A +P F AL VA+ L D
Sbjct: 73 DITYNRLIQGLKAAGVEVDRKNLADIAISDPAAFTALVDVARAALPED 120
>UniRef50_A3ZLR5 Cluster: 50S ribosomal protein L20; n=2;
Planctomycetales|Rep: 50S ribosomal protein L20 -
Blastopirellula marina DSM 3645
Length = 118
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/104 (34%), Positives = 57/104 (54%)
Frame = +2
Query: 260 KRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQHN 439
K+R+F+ A + G R + RA VYA + RK++K + + LW VR+ AA Q
Sbjct: 13 KKRLFKKARGFRGGRGKLLRTVKETLIRAGVYAYRDRKVRKREFRKLWIVRLNAAARQRG 72
Query: 440 ITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
I GL +A + LDRK+LS++A +P+ F+ + + K L
Sbjct: 73 IRYSQFIYGLRKAGLELDRKTLSEMAIHDPRAFDEVTELVKTAL 116
>UniRef50_Q86JU8 Cluster: Similar to Oryza sativa (Rice), and Oryza
sativa (Japonica cultivar- group). B1060H01.9 protein;
n=2; Dictyostelium discoideum|Rep: Similar to Oryza
sativa (Rice), and Oryza sativa (Japonica cultivar-
group). B1060H01.9 protein - Dictyostelium discoideum
(Slime mold)
Length = 124
Score = 69.3 bits (162), Expect = 9e-11
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +2
Query: 266 RVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQHNIT 445
+VF+LA + GR +NC S+A V + L Y +RKLKK D + +W RI A QH +T
Sbjct: 5 KVFKLAKGFFGRSKNCKSLARERVEKGLEYNYVSRKLKKRDFRKMWIERINAGARQHEMT 64
Query: 446 LFSLREGLDRANIMLDRKSL--SDLASWEPKTFEALAAVAK 562
+ GL + + ++RK L S A EP +F+ L +K
Sbjct: 65 YSDFQRGLIASGVEINRKVLLFSIGAVSEPFSFKVLVDHSK 105
>UniRef50_Q73KR3 Cluster: 50S ribosomal protein L20; n=3;
Bacteria|Rep: 50S ribosomal protein L20 - Treponema
denticola
Length = 119
Score = 69.3 bits (162), Expect = 9e-11
Identities = 36/105 (34%), Positives = 59/105 (56%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R++ + + A + GRR + A V +AL+++ RK KK DM+ +W RI AA
Sbjct: 13 RRKAILKQAKGFRGRRGTNFKAARDAVRKALLHSYVGRKDKKSDMRQIWITRINAAVRAE 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
IT G+++A I L+RK+LS++A +P F+A+ +K L
Sbjct: 73 GITYSRFIAGMNKAGIQLNRKALSNMAIEDPTAFKAVVEASKKAL 117
>UniRef50_Q8ZDW8 Cluster: 50S ribosomal protein L20; n=127;
Bacteria|Rep: 50S ribosomal protein L20 - Yersinia
pestis
Length = 118
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/105 (33%), Positives = 57/105 (54%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R +++ + A Y G R Y +A + V +A YA + R+ +K + LW RI AA Q+
Sbjct: 13 RHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQN 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
++ GL +A++ +DRK L+D+A ++ F AL AK L
Sbjct: 73 GLSYSRFINGLKKASVEIDRKILADIAVFDKVAFSALVEKAKAAL 117
>UniRef50_Q7MVQ8 Cluster: 50S ribosomal protein L20; n=11;
Bacteroidetes/Chlorobi group|Rep: 50S ribosomal protein
L20 - Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 115
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/102 (33%), Positives = 55/102 (53%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
+++R+ +L Y G R+N +++A + L YA + RK KK + ++LW RI AA
Sbjct: 13 KRKRILKLTRGYFGARKNVWTVAKNTWEKGLTYAYRDRKSKKRNFRALWIQRINAAARLE 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAK 562
++ L L I ++RK L+DLA P+ F A+ A K
Sbjct: 73 GMSYSRLMGALHANGIEINRKVLADLAMNHPEAFRAIVAKVK 114
>UniRef50_A7CZ03 Cluster: Ribosomal protein L20; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L20 - Opitutaceae
bacterium TAV2
Length = 127
Score = 68.5 bits (160), Expect = 2e-10
Identities = 41/107 (38%), Positives = 54/107 (50%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R++R+ A Y + + A VH A YA + RK KK + + LW VR+ AA
Sbjct: 13 RRKRMLNNAKGYYASKSKLFRYAKDAVHHAWQYAYRDRKKKKGEFRGLWIVRLNAATRAA 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLET 577
I+ EGL ANI LDRK LSDLA + F L A+ L+T
Sbjct: 73 GISYSRFIEGLKAANIELDRKVLSDLAIRDEVAFNGLVKKAQDALKT 119
>UniRef50_Q6KH18 Cluster: 50S ribosomal protein L20; n=31;
Bacteria|Rep: 50S ribosomal protein L20 - Mycoplasma
mobile
Length = 117
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/112 (30%), Positives = 58/112 (51%)
Frame = +2
Query: 239 GPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRIT 418
GP R+++ +LA Y G + + +A + V ++ YA + RK K + LW RI
Sbjct: 6 GPITRKRRKKWLKLAKGYFGHKSIGFKVAKQQVVKSWTYAFRDRKQVKRHFRRLWIARIN 65
Query: 419 AACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLE 574
AA ++ GL ++NI ++RK LS++A +PK F+ + K L+
Sbjct: 66 AATRAQGVSYSLFINGLKKSNIQINRKMLSEIAIHQPKVFDKILTKVKSHLK 117
>UniRef50_O51206 Cluster: 50S ribosomal protein L20; n=4;
Bacteria|Rep: 50S ribosomal protein L20 - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 115
Score = 65.3 bits (152), Expect = 1e-09
Identities = 31/97 (31%), Positives = 58/97 (59%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R++R+ + + G +++ Y A + + ++YAT+ RK++K D + LW RI+AA
Sbjct: 13 RRKRILKKTKGFWGTKKSNYKKAKDTLXKGMMYATRDRKVRKRDFRRLWISRISAALSDT 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEAL 547
+T EGL ++NI ++RK LS+LA + + F+ +
Sbjct: 73 GVTYSRFIEGLLKSNIKINRKILSNLAIEDVEAFKKI 109
>UniRef50_Q9NWH4 Cluster: CDNA FLJ10024 fis, clone HEMBA1000636;
n=1; Homo sapiens|Rep: CDNA FLJ10024 fis, clone
HEMBA1000636 - Homo sapiens (Human)
Length = 148
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +2
Query: 200 MVFLSVINWARCRGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLK 379
MVFL+ W R R D ++R + V + A H+ GR+ CY +AVR V RA V TKAR LK
Sbjct: 1 MVFLTAQLWLRNRVTDRYFRIQEVLKHARHFWGRKNRCYRLAVRTVIRAFVKCTKARYLK 60
Query: 380 KEDMKSL 400
K++M+++
Sbjct: 61 KKNMRTV 67
>UniRef50_Q8FTQ0 Cluster: 50S ribosomal protein L20; n=97;
Bacteria|Rep: 50S ribosomal protein L20 -
Corynebacterium efficiens
Length = 128
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/108 (34%), Positives = 55/108 (50%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
++R + + A Y G+R Y A ++ YA + R+ +K + + LW RI AA +
Sbjct: 13 KRREILKSAKGYRGQRSRLYRKAKEQWLHSMTYAYRDRRARKGEFRKLWIQRINAAARMN 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETD 580
IT L +GL A I +DRK L+DLA + F A+ AK L D
Sbjct: 73 GITYNRLIQGLRLAEIEVDRKILADLAVNDFAAFSAICEAAKAALPED 120
>UniRef50_A0CDN7 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 168
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/103 (33%), Positives = 54/103 (52%)
Frame = +2
Query: 254 WRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQ 433
W ++ LA + GR RN I + V ++L YA +R+L+ ++ W I A +
Sbjct: 4 WSLKKYLELAKGFQGRARNTSKIMMNRVQKSLQYAYVSRRLRPRILRREWIQAINAGVRE 63
Query: 434 HNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAK 562
H I+ GL+ +NI LDRK L++LA EP +F+ + K
Sbjct: 64 HRISYSQFIFGLNHSNIQLDRKILANLAINEPFSFKTVVDEVK 106
>UniRef50_A7ANI5 Cluster: Ribosomal protein L20, putative; n=3;
Piroplasmida|Rep: Ribosomal protein L20, putative -
Babesia bovis
Length = 121
Score = 62.9 bits (146), Expect = 8e-09
Identities = 36/105 (34%), Positives = 53/105 (50%)
Frame = +2
Query: 269 VFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQHNITL 448
VF++A + GR + C +A RAL+Y+ AR+ + ++ W I A + N+T
Sbjct: 8 VFQVAKGFRGRSKGCIKLASTRAARALLYSFNARRKRHTYVRIHWTATINRAAREWNLTY 67
Query: 449 FSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDR 583
L N L+RKSL L+ EP TF+AL +KY L R
Sbjct: 68 SRFIGALTNLNCWLNRKSLFILSLNEPVTFKALVDESKYALSEPR 112
>UniRef50_Q1JT29 Cluster: Ribosomal protein l20, putative; n=6;
Apicomplexa|Rep: Ribosomal protein l20, putative -
Toxoplasma gondii RH
Length = 121
Score = 62.5 bits (145), Expect = 1e-08
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +2
Query: 269 VFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQHNITL 448
+F + + GR RNC IA +AL+Y+ R+ ++ + W RI AA + +
Sbjct: 8 IFEVVRGFRGRSRNCIKIARVRAMKALLYSYIMRRQRQRRYRVFWIGRINAAGREWSFPY 67
Query: 449 FSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAK--YKLETDRFIDGQD 601
L L R NI LDRK L++LA EP +F AL K Y D+ D QD
Sbjct: 68 AWLATSLWRQNIWLDRKMLANLAETEPASFRALVNEGKSVYFWNPDKVRDIQD 120
>UniRef50_Q9AMG2 Cluster: 50S ribosomal protein L20; n=13;
Bacteria|Rep: 50S ribosomal protein L20 - Vibrio
fischeri
Length = 102
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/97 (35%), Positives = 52/97 (53%)
Frame = +2
Query: 236 RGPDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRI 415
RG R ++V + A Y G R Y +A + V +A YA + R+ KK + LW RI
Sbjct: 5 RGVQARARHKKVLKQAKGYYGARSRVYRVAFQAVTKAGQYAYRDRRNKKRVFRQLWIARI 64
Query: 416 TAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWE 526
AA Q+ + GL +A+I +DRK L+D+A ++
Sbjct: 65 NAAARQNEMPYSRFINGLKKASIEIDRKILADIAVFD 101
>UniRef50_Q235I3 Cluster: Ribosomal protein L20 containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Ribosomal
protein L20 containing protein - Tetrahymena thermophila
SB210
Length = 170
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/117 (32%), Positives = 60/117 (51%)
Frame = +2
Query: 275 RLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQHNITLFS 454
+LA + GR +NC V +AL Y+ + R+ ++ + W I AA +HN
Sbjct: 11 KLARGFFGRNKNCLRTMAPRVDKALRYSFRDRRARRRIYRKEWIQTINAAVREHNTPYNR 70
Query: 455 LREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKLETDRFIDGQDKCHPTGIN 625
L+++NI+LDRK LS+LA EP +F+A+ + + + Q K HP IN
Sbjct: 71 FIWALNQSNIILDRKILSNLAINEPFSFKAVLDEVRIQAQL------QSKPHPRIIN 121
>UniRef50_Q8F6Q7 Cluster: 50S ribosomal protein L20; n=6;
Bacteria|Rep: 50S ribosomal protein L20 - Leptospira
interrogans
Length = 117
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/102 (32%), Positives = 54/102 (52%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
R+RR+ + A + G R Y A V +A +A + R+ KK D + LW +RI AA ++
Sbjct: 13 RRRRILKDAKGFRGARSKLYRTAKSAVMKAGQWAYRDRRAKKRDFRKLWIIRINAAAREN 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAK 562
++ L + I +DRKSL++LA + + F +L K
Sbjct: 73 GLSYSVFMNSLKKLGIHMDRKSLAELAFNDREVFNSLVEKIK 114
>UniRef50_Q9X1S8 Cluster: 50S ribosomal protein L20; n=15;
Bacteria|Rep: 50S ribosomal protein L20 - Thermotoga
maritima
Length = 118
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/105 (31%), Positives = 52/105 (49%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
++++ + A Y G Y +A + R+ Y+ RK KK DM+ LW RI A
Sbjct: 12 KRKKYLKAAKGYRGALSRRYKLAKQMYVRSKWYSYVGRKQKKRDMRKLWITRINIAARNE 71
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAKYKL 571
+ L GL A + ++RK LS+LA +P+ F+ +AK L
Sbjct: 72 GLKYSELIHGLKLAGVSINRKMLSELAVNDPEAFKEYVKIAKEAL 116
>UniRef50_A2WUT3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 182
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +2
Query: 260 KRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQHN 439
K ++F+LA + GR +NC IA V +AL Y+ + R KK DM+SLW RI A H
Sbjct: 3 KGKIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRHNKKRDMRSLWIERINAGTRLHG 62
Query: 440 ITLFSLREGLDRANIMLDRKSL 505
+ + + ++++ RK L
Sbjct: 63 VCIHCTQAVKKEISLVVARKDL 84
>UniRef50_Q9NAG2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 191
Score = 53.2 bits (122), Expect = 6e-06
Identities = 30/107 (28%), Positives = 53/107 (49%)
Frame = +2
Query: 242 PDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITA 421
PD + ++ R+ R A R+ A R + Y R+ ++ K + R+
Sbjct: 26 PDVWMKRERLNRFTAWQYASERSTVKGAYRKEDKIFAYLNMQRQDERNLEKFHAEERVRT 85
Query: 422 ACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAK 562
A E+H++ + L +++I+LD LS LA +EP++F +L A AK
Sbjct: 86 ALEEHDMEYSKFKSILSQSHILLDNICLSQLAIYEPRSFRSLVAFAK 132
>UniRef50_UPI0000E1E5AE Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L20 (L20mt); n=1; Pan troglodytes|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
L20 (L20mt) - Pan troglodytes
Length = 110
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +2
Query: 398 LWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 559
LW RITAA ++H + +L L + + L+RK L+DLA +EPKTF++LAA+A
Sbjct: 28 LWINRITAASQEHGLKYPALIGNLVKCQVELNRKVLADLAIYEPKTFKSLAALA 81
>UniRef50_Q9FWQ8 Cluster: Putative 50S ribosomal protein L20; n=5;
Magnoliophyta|Rep: Putative 50S ribosomal protein L20 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 83
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +2
Query: 260 KRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITA 421
K+ +F+LA + GR +NC IA V +AL Y+ + R+ KK +M+ LW RI A
Sbjct: 3 KKEIFKLAKGFRGRAKNCIRIARERVEKALQYSYRDRRNKKREMRGLWIERINA 56
>UniRef50_UPI0000E1F19F Cluster: PREDICTED: hypothetical protein,
partial; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein, partial - Pan troglodytes
Length = 204
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +2
Query: 278 LAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSL 400
L H+ GR+ CY +AVR V RA V TKAR LKK++M+++
Sbjct: 64 LTQHFRGRKNRCYRLAVRTVIRAFVKCTKARYLKKKNMRTV 104
>UniRef50_P34769 Cluster: Plastid 50S ribosomal protein L20; n=1;
Euglena longa|Rep: Plastid 50S ribosomal protein L20 -
Astasia longa (Euglenophycean alga)
Length = 117
Score = 38.3 bits (85), Expect = 0.19
Identities = 22/100 (22%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
+ +++ +L+ +IG + I+ + + +AL ++ RK KK K +W RI + +
Sbjct: 13 KHKKILKLSKGFIGSNSKIFKISNQKIMKALYFSFSDRKKKKRSNKKIWINRINYFLKNY 72
Query: 437 NITLFSLREGLDRA---NIMLDRKSLSDLASWEPKTFEAL 547
F+ + +++ I +++K LS++ + KT L
Sbjct: 73 FFNNFNYNKIINKIKLNKICINKKILSEIIINDYKTIYKL 112
>UniRef50_P56794 Cluster: Chloroplast 50S ribosomal protein L20;
n=231; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 117
Score = 35.5 bits (78), Expect = 1.3
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 257 RKRRVFRL-AAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQ 433
R+R RL A+ + G + RALV A + R +K D + LW RI A +
Sbjct: 12 RRRTKLRLFASSFRGAHSRLTRTMTQQRIRALVSAHRDRGKRKRDFRRLWITRINAVIHE 71
Query: 434 HNITLFSLRE---GLDRANIMLDRKSLSDLA 517
+ +S E L + ++L+RK L+ +A
Sbjct: 72 MGV-FYSYNEFIHNLYKKQLLLNRKILAQIA 101
>UniRef50_UPI0000E87F2E Cluster: Glutamate-ammonia ligase
adenylyltransferase; n=1; Methylophilales bacterium
HTCC2181|Rep: Glutamate-ammonia ligase
adenylyltransferase - Methylophilales bacterium HTCC2181
Length = 892
Score = 34.7 bits (76), Expect = 2.3
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +2
Query: 380 KEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVA 559
+ED+K LW++ +T H + ++ LD + M + K + ++ T E L +
Sbjct: 415 QEDLKDLWNLEVTEDFAVHCLDNLGYKKSLDTYHFMKNLKLMGHYPTFPASTKEKLNTLI 474
Query: 560 KYKLETDRFIDGQDK 604
L ID DK
Sbjct: 475 PVVLHEVTLIDNPDK 489
>UniRef50_Q2EEV4 Cluster: 50S ribosomal protein L20; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep: 50S
ribosomal protein L20 - Helicosporidium sp. subsp.
Simulium jonesii (Green alga)
Length = 120
Score = 33.5 bits (73), Expect = 5.3
Identities = 20/91 (21%), Positives = 40/91 (43%)
Frame = +2
Query: 257 RKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITAACEQH 436
+K + + A Y G + + + + +A A + R+ K+ +W RI +
Sbjct: 13 KKEFILKKAKGYKGGNSSLFKATKQTLLKAEKNAYRDRRYKQRLWNKIWITRINGLLRSY 72
Query: 437 NITLFSLREGLDRANIMLDRKSLSDLASWEP 529
NI ++ L I L+R LS ++ ++P
Sbjct: 73 NINWSVIKFFLKNNKIKLNRHILSQVSIYDP 103
>UniRef50_Q871S3 Cluster: Putative uncharacterized protein 7F4.150;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein 7F4.150 - Neurospora crassa
Length = 1440
Score = 33.1 bits (72), Expect = 7.0
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +2
Query: 359 TKARKLKKEDMKSLWDVRITAACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTF 538
TKA+K KKE ++ + VR A + LF L +D AN + KS +WEP
Sbjct: 139 TKAKKPKKEASETFYSVRRIAGEKTEKGRLFYL---IDWANDPVTGKSFD--PTWEPAGH 193
Query: 539 EALAAVAKYKLETDR 583
AA+A ++L D+
Sbjct: 194 VNEAAIAHWELIKDK 208
>UniRef50_Q1E1J4 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 151
Score = 33.1 bits (72), Expect = 7.0
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = -2
Query: 507 DKDFLSNIILALSKPSLKENSVILCCSQAAVIL 409
D+ L++ L +KPSL S++LCCS A++++
Sbjct: 72 DRVVLNSSCLYFAKPSLLRGSLVLCCSPASLVI 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,059,242
Number of Sequences: 1657284
Number of extensions: 12394865
Number of successful extensions: 24431
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 23900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24430
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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