Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30605
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117203-7|CAB55109.1|  191|Caenorhabditis elegans Hypothetical ...    53   2e-07
AF068710-2|AAC17770.1|  476|Caenorhabditis elegans Hypothetical ...    29   2.5  
AF022971-3|AAG23977.1|  474|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z92837-4|CAH10846.1|  193|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>AL117203-7|CAB55109.1|  191|Caenorhabditis elegans Hypothetical
           protein Y48C3A.10 protein.
          Length = 191

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 30/107 (28%), Positives = 53/107 (49%)
 Frame = +2

Query: 242 PDEFWRKRRVFRLAAHYIGRRRNCYSIAVRNVHRALVYATKARKLKKEDMKSLWDVRITA 421
           PD + ++ R+ R  A      R+    A R   +   Y    R+ ++   K   + R+  
Sbjct: 26  PDVWMKRERLNRFTAWQYASERSTVKGAYRKEDKIFAYLNMQRQDERNLEKFHAEERVRT 85

Query: 422 ACEQHNITLFSLREGLDRANIMLDRKSLSDLASWEPKTFEALAAVAK 562
           A E+H++     +  L +++I+LD   LS LA +EP++F +L A AK
Sbjct: 86  ALEEHDMEYSKFKSILSQSHILLDNICLSQLAIYEPRSFRSLVAFAK 132


>AF068710-2|AAC17770.1|  476|Caenorhabditis elegans Hypothetical
           protein T06A1.5 protein.
          Length = 476

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = -3

Query: 362 WLHKLELGEHFELQSNNNFV-----DGQYNERLI*KPVAFSKI 249
           WLH  EL EH++LQ  N F       G+Y+ +L+   VA  ++
Sbjct: 226 WLHFAELVEHYKLQGVNKFFIYIREIGEYDMKLVKSYVASGEV 268


>AF022971-3|AAG23977.1|  474|Caenorhabditis elegans Hypothetical
           protein C31B8.7 protein.
          Length = 474

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 362 WLHKLELGEHFELQSNNNF 306
           WLH +EL EH++LQ  N F
Sbjct: 224 WLHFVELVEHYKLQGVNKF 242


>Z92837-4|CAH10846.1|  193|Caenorhabditis elegans Hypothetical
           protein R03E1.4 protein.
          Length = 193

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 524 EPKTFEALAAVAKYKLETDRFIDGQDKCHPTGINLNLKDVMLEAWLN 664
           EP + E +++ A+Y+LE  + +    +        N K V+LEA++N
Sbjct: 88  EPPSSEIVSSQAQYRLENMKLLSNVPETFNVAGPSNSKMVLLEAYMN 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,511,603
Number of Sequences: 27780
Number of extensions: 306004
Number of successful extensions: 676
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)