Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30604
(669 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4SC38 Cluster: Chromosome 14 SCAF14660, whole genome s... 78 2e-13
UniRef50_Q9ULK4 Cluster: Mediator of RNA polymerase II transcrip... 75 1e-12
UniRef50_UPI0000D55925 Cluster: PREDICTED: similar to CRSP compl... 75 2e-12
UniRef50_Q9W1X7 Cluster: Mediator of RNA polymerase II transcrip... 71 3e-11
UniRef50_Q7PNT3 Cluster: ENSANGP00000012497; n=2; Endopterygota|... 66 7e-10
UniRef50_UPI0000E46E34 Cluster: PREDICTED: similar to Si:ch211-2... 53 7e-06
UniRef50_P36079 Cluster: Putative uncharacterized protein YKL083... 38 0.29
UniRef50_Q7RJ43 Cluster: Arabidopsis thaliana P42251; n=6; Plasm... 33 6.2
UniRef50_Q17B95 Cluster: Multidrug resistance protein 1; n=1; Ae... 33 6.2
UniRef50_Q8WPJ9 Cluster: Similar to mediator; n=1; Oikopleura di... 33 8.2
UniRef50_Q4QH71 Cluster: Putative uncharacterized protein; n=3; ... 33 8.2
>UniRef50_Q4SC38 Cluster: Chromosome 14 SCAF14660, whole genome
shotgun sequence; n=6; Deuterostomia|Rep: Chromosome 14
SCAF14660, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1398
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/66 (54%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SMAN+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I F+ +I V +
Sbjct: 798 EYRKWKSMANENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRVLERIGARALVAH 857
Query: 179 IQSNLD 196
+++ D
Sbjct: 858 VRTFAD 863
>UniRef50_Q9ULK4 Cluster: Mediator of RNA polymerase II
transcription subunit 23; n=47; Eumetazoa|Rep: Mediator
of RNA polymerase II transcription subunit 23 - Homo
sapiens (Human)
Length = 1368
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFKYE*KIIFEITVIY 178
EYRKW SM+N+NDII+HFS+ G+ PLFLCLLWKM+ ET+ IN I ++ +I V +
Sbjct: 763 EYRKWKSMSNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGYRVLERIGARALVAH 822
Query: 179 IQSNLD 196
+++ D
Sbjct: 823 VRTFAD 828
>UniRef50_UPI0000D55925 Cluster: PREDICTED: similar to CRSP complex
subunit 3 (Cofactor required for Sp1 transcriptional
activation subunit 3) (Transcriptional coactivator
CRSP130) (Vitamin D3 receptor-interacting protein
complex 130 kDa component) (DRIP130)
(Activator-recruited cofactor 130...; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to CRSP complex
subunit 3 (Cofactor required for Sp1 transcriptional
activation subunit 3) (Transcriptional coactivator
CRSP130) (Vitamin D3 receptor-interacting protein
complex 130 kDa component) (DRIP130)
(Activator-recruited cofactor 130... - Tribolium
castaneum
Length = 1300
Score = 74.5 bits (175), Expect = 2e-12
Identities = 31/47 (65%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGTP-LFLCLLWKMIFETNRINPIAFK 139
EYRKW+SM N+ND+++HF V G P LFLCLLWKM+ ET+ I PIA+K
Sbjct: 747 EYRKWSSMNNENDMMAHFGVAGAPPLFLCLLWKMLLETDHITPIAYK 793
>UniRef50_Q9W1X7 Cluster: Mediator of RNA polymerase II
transcription subunit 23; n=2; Sophophora|Rep: Mediator
of RNA polymerase II transcription subunit 23 -
Drosophila melanogaster (Fruit fly)
Length = 1439
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/47 (65%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKMIFETNRINPIAFK 139
EYR WTSM N+NDII+HF P T PLFLCLL+K+I+ET I+P+A+K
Sbjct: 764 EYRTWTSMTNENDIIAHFLRPTTNPLFLCLLFKIIWETENISPVAYK 810
>UniRef50_Q7PNT3 Cluster: ENSANGP00000012497; n=2;
Endopterygota|Rep: ENSANGP00000012497 - Anopheles
gambiae str. PEST
Length = 1367
Score = 66.1 bits (154), Expect = 7e-10
Identities = 28/47 (59%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVP-GTPLFLCLLWKMIFETNRINPIAFK 139
EYR W SM N+NDII+HF + PLFLCL++KMI ET+ I+P+A+K
Sbjct: 742 EYRNWASMTNENDIIAHFGMTVNPPLFLCLVFKMIIETDGISPVAYK 788
>UniRef50_UPI0000E46E34 Cluster: PREDICTED: similar to
Si:ch211-272f15.2; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Si:ch211-272f15.2
- Strongylocentrotus purpuratus
Length = 1150
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +2
Query: 2 EYRKWTSMANDNDIISHFSVPGT-PLFLCLLWKM--IFETNRINPIAFK 139
EY +WTSM ++ + + HFS P T P FLC++WKM + +T RI P K
Sbjct: 553 EYNRWTSMISEAERLHHFSNPSTPPYFLCIIWKMLLVMDTERITPTVVK 601
>UniRef50_P36079 Cluster: Putative uncharacterized protein YKL083W;
n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YKL083W - Saccharomyces
cerevisiae (Baker's yeast)
Length = 204
Score = 37.5 bits (83), Expect = 0.29
Identities = 32/104 (30%), Positives = 46/104 (44%)
Frame = +2
Query: 353 YLYLYKRQSSFIYLYYLGGTNDKTNYKFNICYFMTHS*LSGNFLPLFLYCFLVNIEPILF 532
Y+YLY ++IY+YY CY+ L P FL F + P LF
Sbjct: 12 YMYLYIYVHTYIYIYYC-------------CYYYRDYYLGP---PFFLPVFNLPSNPALF 55
Query: 533 RGTK*RCYFIALFSNGHVCLCTVLFVGLTQFIVNQLRKKVLFCI 664
GT YF+ +FS C LF+ L F++ + +LFC+
Sbjct: 56 FGTALPTYFLFIFS------CLFLFLPLLSFLILRF-SSLLFCL 92
>UniRef50_Q7RJ43 Cluster: Arabidopsis thaliana P42251; n=6;
Plasmodium|Rep: Arabidopsis thaliana P42251 - Plasmodium
yoelii yoelii
Length = 463
Score = 33.1 bits (72), Expect = 6.2
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 356 LYLYKRQSSFIYLYYLGGTNDKTNYKFNICYF 451
LY YK++S +YL YLG + YK N YF
Sbjct: 119 LYKYKKESKTMYLDYLGVDKNDIRYKRNGAYF 150
>UniRef50_Q17B95 Cluster: Multidrug resistance protein 1; n=1; Aedes
aegypti|Rep: Multidrug resistance protein 1 - Aedes
aegypti (Yellowfever mosquito)
Length = 1396
Score = 33.1 bits (72), Expect = 6.2
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +3
Query: 429 TNLTSAIL*LILNFRGTSYHCFCIVFSSILNLFYFVELNNVVILSHYFRMDTCACVP 599
TNLTS I LIL TS++ IV ++I+ +YF+ ++ H RM+T + P
Sbjct: 968 TNLTSVIAILILFCVDTSFY-IVIVLATIVIAYYFLLFYHLETSRHLKRMETSSKAP 1023
>UniRef50_Q8WPJ9 Cluster: Similar to mediator; n=1; Oikopleura
dioica|Rep: Similar to mediator - Oikopleura dioica
(Tunicate)
Length = 1165
Score = 32.7 bits (71), Expect = 8.2
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +2
Query: 23 MANDNDIISHFSVPG-TPLFLCLLWKMI 103
M N+ ++I F P TP+FLC++WK++
Sbjct: 628 MQNEAELIQRFVDPNATPVFLCIIWKLL 655
>UniRef50_Q4QH71 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 526
Score = 32.7 bits (71), Expect = 8.2
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -1
Query: 351 VAVSLTEVHEGETTLSYRGFCFSLIEVLGA*SDGP 247
+A +LT V+E E TL+YR FC LI V + GP
Sbjct: 307 LAATLTLVNEAEGTLNYRQFCEWLIRVAVTVNGGP 341
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,349,070
Number of Sequences: 1657284
Number of extensions: 12525504
Number of successful extensions: 24015
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23999
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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