Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30604
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    24   0.98 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   0.98 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   1.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.0  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 90  NRHRNSGVPGTEKCDIIS 37
           N+H  +G+P    CD+IS
Sbjct: 430 NQHLQTGLPAGSYCDVIS 447


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 90  NRHRNSGVPGTEKCDIIS 37
           N+H  +G+P    CD+IS
Sbjct: 431 NQHLQTGLPAGSYCDVIS 448


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 90  NRHRNSGVPGTEKCDIIS 37
           N+H  +G+P    CD+IS
Sbjct: 431 NQHFETGLPAGSYCDVIS 448


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 586 VPVYRPVCRPYSVY 627
           VP YR   RPY VY
Sbjct: 253 VPFYRYCYRPYPVY 266


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 593 CTVLFVGLTQFIVNQLRKKVL 655
           C+VL V LT F     RKK+L
Sbjct: 77  CSVLLVFLTYFFNILFRKKLL 97


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 593 CTVLFVGLTQFIVNQLRKKVL 655
           C+VL V LT F     RKK+L
Sbjct: 73  CSVLLVFLTYFFNILFRKKLL 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,523
Number of Sequences: 336
Number of extensions: 3401
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)