Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30601
(775 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26780.1 68417.m03857 co-chaperone grpE family protein simila... 106 2e-23
At5g55200.1 68418.m06881 co-chaperone grpE protein, putative sim... 97 9e-21
At5g17710.2 68418.m02076 co-chaperone grpE family protein simila... 58 9e-09
At5g17710.1 68418.m02075 co-chaperone grpE family protein simila... 58 9e-09
At1g36390.2 68414.m04521 co-chaperone grpE family protein simila... 43 2e-04
At1g36390.1 68414.m04520 co-chaperone grpE family protein simila... 43 2e-04
At5g57035.1 68418.m07119 protein kinase family protein contains ... 33 0.21
At4g30130.1 68417.m04283 expressed protein contains Pfam domains... 33 0.28
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 33 0.28
At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing ... 31 0.64
At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing ... 31 0.64
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 31 0.64
At5g27220.1 68418.m03247 protein transport protein-related low s... 31 0.64
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 31 0.85
At4g02710.1 68417.m00366 kinase interacting family protein simil... 31 0.85
At3g52390.2 68416.m05762 tatD-related deoxyribonuclease family p... 31 0.85
At3g52390.1 68416.m05761 tatD-related deoxyribonuclease family p... 31 0.85
At5g52280.1 68418.m06488 protein transport protein-related low s... 31 1.1
At1g77920.1 68414.m09080 bZIP family transcription factor contai... 31 1.1
At5g49180.1 68418.m06087 pectinesterase family protein contains ... 30 1.5
At2g42530.1 68415.m05263 cold-responsive protein / cold-regulate... 29 2.6
At4g25730.1 68417.m03703 FtsJ-like methyltransferase family prot... 29 3.4
At4g16144.1 68417.m02448 expressed protein 29 3.4
At1g49015.1 68414.m05496 eukaryotic translation initiation facto... 29 3.4
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 29 4.5
At4g29750.1 68417.m04237 expressed protein contains Pfam domain,... 29 4.5
At5g55820.1 68418.m06956 expressed protein 28 6.0
At3g17520.1 68416.m02238 late embryogenesis abundant domain-cont... 28 6.0
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 28 7.9
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 28 7.9
>At4g26780.1 68417.m03857 co-chaperone grpE family protein similar
to chaperone GrpE type 2 [Nicotiana tabacum] GI:3851640;
contains Pfam profile PF01025: co-chaperone GrpE
Length = 327
Score = 106 bits (254), Expect = 2e-23
Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Frame = +3
Query: 90 ALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRK 269
A S+ ++SES+D + ++ K + ++ +E+ + DK R A+ ENV
Sbjct: 123 AASSSSESDSESDDD-ELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMD 181
Query: 270 RMLKQVEDAKSFAIQSFCKDLLEVADTL-------TXXXXXXXXXXXXXXXXXXLRALHD 428
R + E+ K +A+Q+F K LL+VAD L L+ L +
Sbjct: 182 RTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLE 241
Query: 429 GVRLTRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEVEGAESGTVVAVSKVGYKLH 608
GV +T QL +VF + G+ P+ E FDPN H A+FQ GTV V K GY L+
Sbjct: 242 GVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLY 301
Query: 609 ERCVRPALVGVAK 647
+R +RPA VGV +
Sbjct: 302 DRVIRPAEVGVTQ 314
>At5g55200.1 68418.m06881 co-chaperone grpE protein, putative
similar to chaperone GrpE type 2 [Nicotiana tabacum]
GI:3851640; contains Pfam profile PF01025: co-chaperone
GrpE
Length = 302
Score = 97.5 bits (232), Expect = 9e-21
Identities = 59/168 (35%), Positives = 85/168 (50%), Gaps = 10/168 (5%)
Frame = +3
Query: 168 IESLTNEVNSIKEQFNDI---NDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLE 338
++ ++ + + +K Q DI DK+ R A+ +N+ R + E AK FA+Q+F LL+
Sbjct: 120 VKLVSEKEDLLKVQQKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLD 179
Query: 339 VADTLTXXXXXXXXXXXXXXXXXXL-------RALHDGVRLTRAQLGQVFARHGLVPVSP 497
VAD L L + L +GV +T QL +VF + GLV P
Sbjct: 180 VADNLERASSVVKESFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDP 239
Query: 498 LREKFDPNLHEALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGV 641
L E F+PN H A+FQ GT+ V K GY L++R +RPA VGV
Sbjct: 240 LNEPFNPNRHNAVFQVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGV 287
>At5g17710.2 68418.m02076 co-chaperone grpE family protein similar
to co-chaperone CGE1 precursor isoform a [Chlamydomonas
reinhardtii] GI:15384277; contains Pfam profile PF01025:
co-chaperone GrpE
Length = 326
Score = 57.6 bits (133), Expect = 9e-09
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Frame = +3
Query: 93 LSAEKPAESESNDKLPATIEECHKQIES----LTNEVNSIKEQFNDINDKYKRALADGEN 260
L + K A +++N+ A IE K IE L ++V S+ + + D+ R AD +N
Sbjct: 116 LKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRISADFDN 175
Query: 261 VRKRMLKQVEDAKSFAIQSFCKDLLEVADTLTXXXXXXXXXXXXXXXXXXLRALHDGVRL 440
RKR ++ + S A ++LL V D + + +
Sbjct: 176 FRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGE------EKVTNSYQS 229
Query: 441 TRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEVEGAESGTVVAVSKVGYKLHERCV 620
Q ++ G++ V + ++FDP LHEA+ +++ E G V+ + G+ L ER +
Sbjct: 230 IYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERLL 289
Query: 621 RPALVGVA 644
RP++V V+
Sbjct: 290 RPSMVKVS 297
>At5g17710.1 68418.m02075 co-chaperone grpE family protein similar
to co-chaperone CGE1 precursor isoform a [Chlamydomonas
reinhardtii] GI:15384277; contains Pfam profile PF01025:
co-chaperone GrpE
Length = 324
Score = 57.6 bits (133), Expect = 9e-09
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Frame = +3
Query: 93 LSAEKPAESESNDKLPATIEECHKQIES----LTNEVNSIKEQFNDINDKYKRALADGEN 260
L + K A +++N+ A IE K IE L ++V S+ + + D+ R AD +N
Sbjct: 114 LKSYKEALADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRISADFDN 173
Query: 261 VRKRMLKQVEDAKSFAIQSFCKDLLEVADTLTXXXXXXXXXXXXXXXXXXLRALHDGVRL 440
RKR ++ + S A ++LL V D + + +
Sbjct: 174 FRKRTERERLNLVSNAQGEVVENLLAVLDNFERAKSQIKVETEGE------EKVTNSYQS 227
Query: 441 TRAQLGQVFARHGLVPVSPLREKFDPNLHEALFQQEVEGAESGTVVAVSKVGYKLHERCV 620
Q ++ G++ V + ++FDP LHEA+ +++ E G V+ + G+ L ER +
Sbjct: 228 IYKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERLL 287
Query: 621 RPALVGVA 644
RP++V V+
Sbjct: 288 RPSMVKVS 295
>At1g36390.2 68414.m04521 co-chaperone grpE family protein similar
to co-chaperone CGE1 precursor isoform b [Chlamydomonas
reinhardtii] GI:15384279; contains Pfam profile PF01025:
co-chaperone GrpE
Length = 279
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/161 (22%), Positives = 68/161 (42%)
Frame = +3
Query: 162 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 341
K+ + +V S+ + + R AD +N RK++ K +S A K LL +
Sbjct: 106 KEKNKMDQKVLSLSMKIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPI 165
Query: 342 ADTLTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPN 521
D+ + + G+ Q +V + ++ + + FDP
Sbjct: 166 IDSFEKAKLQVRVDTDKEKK---IDTSYQGIY---RQFVEVLRYLRVSVIATVGKPFDPL 219
Query: 522 LHEALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVA 644
LHEA+ ++E E ++G + G+ L +R +RPA V V+
Sbjct: 220 LHEAISREESEAVKAGIITEELNKGFVLGDRVLRPAKVKVS 260
>At1g36390.1 68414.m04520 co-chaperone grpE family protein similar
to co-chaperone CGE1 precursor isoform b [Chlamydomonas
reinhardtii] GI:15384279; contains Pfam profile PF01025:
co-chaperone GrpE
Length = 279
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/161 (22%), Positives = 68/161 (42%)
Frame = +3
Query: 162 KQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEV 341
K+ + +V S+ + + R AD +N RK++ K +S A K LL +
Sbjct: 106 KEKNKMDQKVLSLSMKIASEKEMKIRLQADFDNTRKKLDKDRLSTESNAKVQILKSLLPI 165
Query: 342 ADTLTXXXXXXXXXXXXXXXXXXLRALHDGVRLTRAQLGQVFARHGLVPVSPLREKFDPN 521
D+ + + G+ Q +V + ++ + + FDP
Sbjct: 166 IDSFEKAKLQVRVDTDKEKK---IDTSYQGIY---RQFVEVLRYLRVSVIATVGKPFDPL 219
Query: 522 LHEALFQQEVEGAESGTVVAVSKVGYKLHERCVRPALVGVA 644
LHEA+ ++E E ++G + G+ L +R +RPA V V+
Sbjct: 220 LHEAISREESEAVKAGIITEELNKGFVLGDRVLRPAKVKVS 260
>At5g57035.1 68418.m07119 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 786
Score = 33.1 bits (72), Expect = 0.21
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Frame = +3
Query: 51 PNLTIKTFRPSVRALSAEKPAESESNDKL--PATIEECHKQ--IESLTNEVNSIKEQFND 218
P +KT + VRA + E ++ + A E HKQ ++SL++E E+
Sbjct: 280 PRPHLKTPKSGVRAEVEQLRKEVQTTLSMYKQACEELVHKQTQVQSLSSECIKETERVIT 339
Query: 219 INDKY---KRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTL 353
+K ++A A+ + + +K+VE+AKS + FC+ L D L
Sbjct: 340 ALEKEEMRRKAAAEEKEKHLKAVKEVEEAKSMLAKEFCERQLAELDAL 387
>At4g30130.1 68417.m04283 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 725
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 105 KPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDK 230
K A+S + DK ATI + H QI+ + + SI E+ + D+
Sbjct: 440 KGADSSAVDKTRATIRDLHTQIKVSIHSIESISERIETLRDQ 481
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 32.7 bits (71), Expect = 0.28
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +3
Query: 90 ALSAEKPAESESNDKLPATIEECHKQI----ESLTNEVNSIKEQFNDINDKYKRALADGE 257
AL AEK + + TIE+ KQ+ E L ++++S E+ N +N ++ + +
Sbjct: 476 ALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQ 535
Query: 258 NVRKRMLKQ--VEDAKSFAIQSFCKDLLEVA 344
+V ++ +Q VE +K+ + S + L VA
Sbjct: 536 SVIAKLEEQLTVESSKADTLVSEIEKLRAVA 566
>At5g66030.2 68418.m08315 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 765
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = +3
Query: 81 SVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGEN 260
+++A+ AE+ +N+KL TIEE ++ N++ ++++ D D+ L
Sbjct: 214 ALKAMDAERQQLRSANNKLRDTIEELRGSLQPKENKIETLQQSLLD-KDQILEDL----- 267
Query: 261 VRKRMLKQVEDAKSFAI 311
K+ L+ VE+ K A+
Sbjct: 268 --KKQLQAVEERKQIAV 282
>At5g66030.1 68418.m08314 Golgi-localized GRIP domain-containing
protein contains Pfam profile PF01465: GRIP domain;
supporting cDNA gi|20303028|gb|AF499634.1|
Length = 788
Score = 31.5 bits (68), Expect = 0.64
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = +3
Query: 81 SVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGEN 260
+++A+ AE+ +N+KL TIEE ++ N++ ++++ D D+ L
Sbjct: 214 ALKAMDAERQQLRSANNKLRDTIEELRGSLQPKENKIETLQQSLLD-KDQILEDL----- 267
Query: 261 VRKRMLKQVEDAKSFAI 311
K+ L+ VE+ K A+
Sbjct: 268 --KKQLQAVEERKQIAV 282
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 90 ALSAEKPAESESNDKLPA--TIEECHKQI-ESLTNEVNSIKEQFNDINDKYKRALADGEN 260
+L E+ ESN++L ++ E HK+ E L NE+ + KE+F + + + D ++
Sbjct: 289 SLKDERVKMDESNEELKKFESVHEKHKKRQEVLDNELRACKEKFKEFERQDVKHREDLKH 348
Query: 261 VRKRMLKQVED 293
V K+ +K++ED
Sbjct: 349 V-KQKIKKLED 358
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/109 (19%), Positives = 56/109 (51%)
Frame = +3
Query: 30 LADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQ 209
+A+ + +L I + +++ LS ++ ++ D +EE ++ S NE+ S+K+
Sbjct: 460 IAEAVRKLSLEIVSKEKTIQQLSEKQHSKQTKLDSTEKCLEETTAELVSKENELCSVKDT 519
Query: 210 FNDINDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDLLEVADTLT 356
+ + ++ + ++ ++ + K + K F QS +L+++ ++LT
Sbjct: 520 YRECLQNWEIKEKELKSFQEEVKKIQDSLKDF--QSKEAELVKLKESLT 566
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 31.1 bits (67), Expect = 0.85
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 27 YLADTT--LRPN-LTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQ-IESLTNEV- 191
Y+AD + LR N TIK + + + + S K +E+ H + +E + ++
Sbjct: 212 YMADLSHELRENEATIKEKQKQIEEMKGWSSKQEISQMK--KELEKSHNEMLEGIKEKIS 269
Query: 192 NSIKEQFNDINDKYKRALADGENVRKRM 275
N +KE D+ ++ +A A+ E K+M
Sbjct: 270 NQLKESLEDVKEQLAKAQAEREETEKKM 297
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 75 RPSVRALSAEKPAESESNDKLPATIE--ECHKQIESLTNEVNSIKEQFNDINDKYKRALA 248
+ L+ ++ DK A I+ +C I +L + +E IN++ ++A
Sbjct: 318 KAETETLALKRSLAKAETDKETALIQYRQCLNTISNLEERLRKAEEDARLINERAEKAGV 377
Query: 249 DGENVRKRMLKQVEDAKSFAIQ 314
+ EN+++ + K ++D ++ +Q
Sbjct: 378 EVENLKQTVSKLIKDKEASELQ 399
>At3g52390.2 68416.m05762 tatD-related deoxyribonuclease family
protein similar to SP|P27859 Deoxyribonuclease tatD (EC
3.1.21.-) (DNAse tatD) {Escherichia coli}; contains Pfam
profile PF01026: TatD related DNase
Length = 323
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 456 GQVFARHGLVPV--SPLREKFDPNLH-EALFQQEVEGAESGTVVAVSKVG 596
G++F G+ P + E DP H +ALF EG + G VVA+ + G
Sbjct: 71 GRLFCTVGVHPTRCNEFEESGDPEKHYQALFSLAKEGMQKGKVVAIGECG 120
>At3g52390.1 68416.m05761 tatD-related deoxyribonuclease family
protein similar to SP|P27859 Deoxyribonuclease tatD (EC
3.1.21.-) (DNAse tatD) {Escherichia coli}; contains Pfam
profile PF01026: TatD related DNase
Length = 304
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 456 GQVFARHGLVPV--SPLREKFDPNLH-EALFQQEVEGAESGTVVAVSKVG 596
G++F G+ P + E DP H +ALF EG + G VVA+ + G
Sbjct: 52 GRLFCTVGVHPTRCNEFEESGDPEKHYQALFSLAKEGMQKGKVVAIGECG 101
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +3
Query: 153 ECHKQIESLTNEVNSIKEQFNDIN---DKYKRALADGENVRKRMLKQVEDAK 299
E HK ++S NE++++K+Q D++ D YK+ + E + + ++ E K
Sbjct: 414 EEHKGMDSGNNEIDTLKQQIEDLDWELDSYKKKNEEQEILLDELTQEYESLK 465
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 120 ESNDKLPATIEECHKQIESLTNEVNSIKEQFNDIND-KYKRALADGENVRKRMLKQVED 293
ESN L + + ++ +E NE++S+ + + + + G N + +Q+ED
Sbjct: 377 ESNSNLILAVRDLNEMLEQKNNEISSLNSLLEEAKKLEEHKGMDSGNNEIDTLKQQIED 435
>At1g77920.1 68414.m09080 bZIP family transcription factor contains
Pfam profile: PF00170 bZIP transcription factor
Length = 368
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 108 PAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADG-ENVRKRMLKQ 284
P + N+ + + H QIE+ N ++ I+DK KR LA E RK L++
Sbjct: 53 PRIDDHNNNIKINYDSSHNQIEAEQPSSNDNQDDDGRIHDKMKRRLAQNREAARKSRLRK 112
>At5g49180.1 68418.m06087 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 571
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 54 NLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFN 215
N+TI++ S++ S E A++ ++ +E C K + T+++ + F+
Sbjct: 91 NVTIRSIEDSIKKASVELTAKAANDKDTKGALELCEKLMNDATDDLKKCLDNFD 144
>At2g42530.1 68415.m05263 cold-responsive protein / cold-regulated
protein (cor15b) nearly identical to cold-regulated gene
cor15b [Arabidopsis thaliana] GI:456016; contains Pfam
profile PF02987: Late embryogenesis abundant protein
Length = 141
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 174 SLTNEVNSIKEQFND-INDKYKRALADGENVRKRMLKQVEDAKSFAIQSFCKDL 332
++ +++N ++ +D + DK K ALADGE + ++++ +A A + K L
Sbjct: 57 NILDDLNEATKKASDFVTDKTKEALADGEKTKDYIVEKTIEANETATEEAKKAL 110
>At4g25730.1 68417.m03703 FtsJ-like methyltransferase family protein
contains Pfam profile: PF01728 FtsJ-like
methyltransferase
Length = 821
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/69 (28%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Frame = +3
Query: 150 EECHKQ-IESLT-NEVNSIKEQFNDINDKYKRALADGENVRKRML-KQVEDAKSFAIQSF 320
E+ H+Q ++ +T +EVN++K QF +IN + + +A+ + +KR K++E + A +
Sbjct: 669 EKQHRQPMKPVTKDEVNAMKAQFKEINARPAKKVAEAKARKKRAAQKRLEKVRKKA--NT 726
Query: 321 CKDLLEVAD 347
D +++D
Sbjct: 727 ISDTADISD 735
>At4g16144.1 68417.m02448 expressed protein
Length = 390
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 93 LSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKR 239
+S P + LP K++ ++ NE+ S+K +FN + DK R
Sbjct: 57 ISETIPFHRDYQASLPQERLGSRKRLRAVINELESLKPEFNQLVDKLNR 105
>At1g49015.1 68414.m05496 eukaryotic translation initiation
factor-related contains similarity to eukaryotic
translation initiation factor 3 subunit 9 SP:Q9C5Z1
Length = 227
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 449 SPRESHTVVQGS*GAALGLRPRSLWYALCCSR 354
SPR H V+ G A++ + S W +L CSR
Sbjct: 196 SPRGKHIVLAGLKAASMAISSFSTWISLRCSR 227
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +3
Query: 87 RALSAEKPAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGEN 260
R ++ + E E + A ++ +++++ E +S+ ++ ND+NDK + A+GE+
Sbjct: 47 RLVNEKHGFEIEEKSREIAELKRANEELQRCLREKDSVVKRVNDVNDKLR---ANGED 101
>At4g29750.1 68417.m04237 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 776
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 343 QTH*RLQQRAYQRERGRRPRAAPYEPCTTVCDSRGLN*DRCSRGTAWSRCLP 498
+ H ++ R Y +E G P+ P E + +C+ L + R W+ C P
Sbjct: 316 EIHRSVEARDYVQEDGNYPKNVPKEQLSELCELNDLLDEVGPRFHDWTGCAP 367
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +3
Query: 3 YTFGRIAKYLADTTLRPNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQ 167
+++ R ++LAD +R +LT P L E+P + S++ + H+Q
Sbjct: 130 FSYQRPVRFLADNVVRQDLTSVVNNPLEEQLLEEEPQHNLSHNLVRQVSNHSHEQ 184
>At3g17520.1 68416.m02238 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to PIR|S04045|S04045 embryonic
abundant protein D-29 [Gossypium hirsutum]; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 298
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +3
Query: 51 PNLTIKTFRPSVRALSAEKPAESESNDKLPATIEECHKQIESLTN----EVNSIKEQFND 218
PNL + A A K ++ +KL T+E ++ +T+ + +KE+
Sbjct: 172 PNLGETVSEKAKEAKEAAKRKAGDAKEKLAETVETAKEKASDMTSAAKEKAEKLKEEAER 231
Query: 219 INDKYKRALADG-ENVRKRMLKQVEDAKSFAIQSF 320
+ K + + E + + + +E AK A QS+
Sbjct: 232 ESKSAKEKIKESYETAKSKADETLESAKDKASQSY 266
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +3
Query: 108 PAESESNDKLPATIEECHKQIESLTNEVNSIKEQFNDINDKYKRALADGENVRKRMLKQ 284
P SE+ + L E C + L V + E + K ADG ++ R +KQ
Sbjct: 234 PLRSENTNSLEVEAESCPSLLSELLEYVARLSEHSLTSSGHRKELFADGCDLNGRRVKQ 292
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 199 IELTSLVKLSICL*HSSMVAGSLSFDSDSAGFSALSARTD 80
+ +T ++ LS+CL + M S S +DSAG+S+ D
Sbjct: 19 LTITIVLLLSLCLVGTWMFMSSWSAPADSAGYSSTDTAKD 58
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,320,318
Number of Sequences: 28952
Number of extensions: 282107
Number of successful extensions: 1060
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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