Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30598
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8813| Best HMM Match : No HMM Matches (HMM E-Value=.) 273 9e-74
SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 31 1.3
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 31 1.3
SB_52038| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_57815| Best HMM Match : Ribosomal_L35p (HMM E-Value=6.5) 29 3.0
SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8) 29 3.0
SB_15138| Best HMM Match : CLN3 (HMM E-Value=4.4e-05) 29 3.0
SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3) 29 5.3
SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4) 28 7.0
SB_49796| Best HMM Match : DUF293 (HMM E-Value=7.6) 28 7.0
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24) 28 9.2
SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 28 9.2
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_8813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 273 bits (670), Expect = 9e-74
Identities = 129/225 (57%), Positives = 169/225 (75%), Gaps = 3/225 (1%)
Frame = +1
Query: 76 TKMALRTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKR 255
+KMA+RTYG KP SFQ+E+GG+FY +GSEVGN+LR+FRGSLYKKYP + RR T +ERK+
Sbjct: 198 SKMAVRTYGQKPKSFQLEDGGEFYMIGSEVGNFLRMFRGSLYKKYPSLWRRLATLDERKK 257
Query: 256 LIDNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWL 435
++ G G + +A EVE+I+EGNDDKYK +QE + S K + +W
Sbjct: 258 IVSLGFGHNNLATNVTLLRALEVEEILEGNDDKYKISLEAQESSRQAASGKSKRSSTAWT 317
Query: 436 P--VMPNSS-HLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENASQKQVLVPIR 606
P + P+SS HLDAVP +TP++R+R+ K++RTFP C+DD DM A+ E A+Q +VLVPIR
Sbjct: 318 PQTLFPSSSFHLDAVPCSTPVNRNRLGPKRIRTFPTCYDDHDMGAIHEAAAQPEVLVPIR 377
Query: 607 LDMEIEGQKLRDTFTWNKNESIITPEQFAEVLCDDLELNTSTFIP 741
LD++IEGQKLRDTFTWNKNE+ I PE FAEVLCDDL+L S+F+P
Sbjct: 378 LDVDIEGQKLRDTFTWNKNETQIAPETFAEVLCDDLDLPPSSFVP 422
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 100 GDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRLIDNGLG- 276
G KP FQ+E G+FY +GSEVG+YL L +G+LYK++P + RR T EERK ++ +G
Sbjct: 13 GKKPEIFQLEPTGEFYMIGSEVGHYLGLMKGALYKRFPSLWRRIPTLEERKIILSLDIGY 72
Query: 277 PHXXXXXXXXXKASEVEDIIEGNDDKYK 360
KASEV++II+G KY+
Sbjct: 73 TSLSNSNIMLVKASEVDEIIKGAGTKYR 100
Score = 34.7 bits (76), Expect = 0.080
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 580 QKQVLVPIRLDMEIEGQKLRDTFTWNKNESIITPEQFAEVLCDDLEL 720
+K +V L++ + L D F W+ +E +PEQFA LC DL L
Sbjct: 780 RKSAVVDQILNIHVGNISLVDQFEWDLSEPQNSPEQFALSLCSDLGL 826
>SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 639
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/92 (21%), Positives = 39/92 (42%)
Frame = +1
Query: 235 TNEERKRLIDNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATPRESKSKK 414
++E++ +++GL S E I+G+D + ++ +ATPR ++
Sbjct: 519 SSEQQHPAVEDGLDESKGLEEESVHGVSSDEITIKGSDAETAVDTLQTPIATPRSARPPS 578
Query: 415 PHTPSWLPVMPNSSHLDAVPQATPISRSRVHN 510
+P P HL + P+ P R H+
Sbjct: 579 -DSPRPARPQPEPRHLRSPPEPKPRHRDSSHD 609
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/92 (21%), Positives = 39/92 (42%)
Frame = +1
Query: 235 TNEERKRLIDNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATPRESKSKK 414
++E++ +++GL S E I+G+D + ++ +ATPR ++
Sbjct: 2538 SSEQQHPAVEDGLDESKGLEEESVHGVSSDEITIKGSDAETAVDTLQTPIATPRSARPPS 2597
Query: 415 PHTPSWLPVMPNSSHLDAVPQATPISRSRVHN 510
+P P HL + P+ P R H+
Sbjct: 2598 -DSPRPARPQPEPRHLRSPPEPKPRHRDSSHD 2628
>SB_52038| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -1
Query: 707 SHSTSANCSGVIIDSFLFHVNVSLSF*PSISMSNRIGTSTCFCEAF-SSIAVMSVSSKHS 531
S S S + S + S ++ S+S ++SMS + S C CE F + V+SVS + S
Sbjct: 34 SDSMSVSVSVSVSVSIRVAMSESMSVSVTVSMSVSVSVSECLCEFFYEPVYVISVSIRVS 93
Query: 530 GNV 522
+V
Sbjct: 94 VSV 96
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = -3
Query: 651 CKCIPEFLTLNLHVQSNRYKHLLLRSILQHCSHVCVIETQWECSHLLIMHSTPADWSSLG 472
C+CI T ++ +HL S+ +C + ++ T C L + H+T G
Sbjct: 464 CRCITILTTAIACCYASVSQHLQQPSLAAYCRCITILTTAIACCLLQVYHNT-----YNG 518
Query: 471 HSIQMRRVWHD 439
H + + +V+H+
Sbjct: 519 HRLLLMQVYHN 529
>SB_57815| Best HMM Match : Ribosomal_L35p (HMM E-Value=6.5)
Length = 168
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +1
Query: 322 VEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSW---LPVMPNSSHLDAVPQ---AT 483
+ ++I + +K+K SQ + ++ K K+P SW LP N +H +P +T
Sbjct: 17 ITELIRRSGEKFKRGRASQHSSPQKKKKEKRP--LSWDRTLPEKQNGNHTYGLPNRYGST 74
Query: 484 PISRSRVHNKK 516
+ R V N K
Sbjct: 75 RLLRKNVKNPK 85
>SB_39988| Best HMM Match : NAD_kinase (HMM E-Value=1.8)
Length = 581
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 18 INITILEVNVIILSKEQHNYKNGLTYVRR 104
+NITI+ VII+ + H+Y + L + RR
Sbjct: 214 VNITIITTTVIIVKHDHHHYHHHLCHDRR 242
>SB_15138| Best HMM Match : CLN3 (HMM E-Value=4.4e-05)
Length = 662
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 121 ENLSAYRRTYVRPFL*LCCSFDKIITL 41
+N+SA RR + R FL L C ++ITL
Sbjct: 335 DNVSAVRREFSRAFLLLICCSSRVITL 361
>SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3)
Length = 1281
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 532 LCFDDTDMTAMLENASQKQVLVPIRLDMEIEGQ--KLRDTFTWNKNESIITPEQFAE 696
L F+DT+ + ENA+ K++ +P+ E++ Q + R++F NK P F +
Sbjct: 427 LSFEDTNTRKLQENANVKELEIPVVCFPELKKQTRQSRNSFP-NKENVFSEPRNFGK 482
>SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 881
Score = 28.7 bits (61), Expect = 5.3
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 337 EGNDDKYKAVSVSQELATPRESKSKKPHTP---SWLPVMPNSSHLDAVPQATPISRSRVH 507
+G DK AV ++ +P+E + HTP LPV +S+H+ + + H
Sbjct: 652 KGQRDKTMAVKSTKTQTSPQEYRESPLHTPLPRKRLPVPISSTHIAPPTERVALGH---H 708
Query: 508 NKKVRTFPLCFDDTD 552
+K+V FDD D
Sbjct: 709 DKRVH-----FDDDD 718
>SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 373 SQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSR 501
SQ+ + S HTP P P +S + +P TP S S+
Sbjct: 30 SQDELLLTSAASSPSHTPPGTPTTPTTSTVSFLPSTTPSSSSQ 72
>SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4)
Length = 611
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +1
Query: 379 ELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVHNKKVRTFPLCF 540
E+ATP++ ++ +P TP +P M + Q I + P CF
Sbjct: 97 EIATPQQPETIQPETPKDIPSMAPVPEIATSQQPETIQPDEPEQPGIHLKPECF 150
>SB_49796| Best HMM Match : DUF293 (HMM E-Value=7.6)
Length = 542
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +1
Query: 379 ELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVHNKKVRTFPLCF 540
E+ATP++ ++ +P TP +P M + Q I + P CF
Sbjct: 28 EIATPQQPETIQPETPKDIPSMAPVPEIATSQQPETIQPDEPEQPGIHLKPECF 81
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/28 (39%), Positives = 21/28 (75%)
Frame = +1
Query: 553 MTAMLENASQKQVLVPIRLDMEIEGQKL 636
+T M + S+K++LVP +L++E+ QK+
Sbjct: 1523 ITKMQRSDSKKKLLVPTKLEVEVSEQKI 1550
>SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24)
Length = 324
Score = 27.9 bits (59), Expect = 9.2
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 85 ALRTYGDKPISFQIEEGGD--FYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 258
+LR DK ++ GD +Y + S++ ++L + SL +K+P + L +E+ L
Sbjct: 151 SLRNILDKLHEYKWPADGDGQYYYLTSQIAHFLGI--ESLQEKHPKIEFHVLQEDEKSFL 208
Query: 259 IDNG 270
++NG
Sbjct: 209 LENG 212
>SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1735
Score = 27.9 bits (59), Expect = 9.2
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +1
Query: 367 SVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVHNKKVRTFPLCFDD 546
S +E+A+P + K + S + + + P +TP R+R KV+ P +
Sbjct: 1203 SDEEEVASPVKRKGRGKARKSPQKITSHGTSSTPAPNSTPAKRTRGRGVKVKDEP----E 1258
Query: 547 TDMTAMLENASQKQVLVP-IRLDMEIEGQKLRDTFTWNKNESIITPEQF 690
T + + SQ ++ +P + M I G++ R T + +E PE F
Sbjct: 1259 TPVISSSSATSQTEMSLPDVTPLMPIFGRRGRGRVTLS-SEGPELPEPF 1306
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +1
Query: 325 EDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 486
+D +D V QE TP K +KP T + + + P+ + + P P
Sbjct: 245 QDPAPADDTASATEDVPQEEPTPESPKEEKPRTWAAMVIQPSPTPAGSAPVVKP 298
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 433 LPVMPNSSHLDAVPQATPISRSRVHNKKVRTFPL 534
+PV P+ H+D Q+ P+S + N+ V P+
Sbjct: 2373 VPVRPSPPHVDGFSQSPPMSTLNMSNRPVSMSPV 2406
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,391,871
Number of Sequences: 59808
Number of extensions: 550244
Number of successful extensions: 1482
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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