Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30598
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32683-10|CAA83625.1|  381|Caenorhabditis elegans Hypothetical p...   175   3e-44
Z70034-6|CAA93850.1|  301|Caenorhabditis elegans Hypothetical pr...    34   0.12 
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    30   2.0  
U41013-2|AAA82300.1|  557|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81553-3|CAB04493.1|  136|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ...    29   4.6  
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z70270-7|CAH04652.1|  175|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical p...    28   8.0  
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ...    28   8.0  
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z32683-10|CAA83625.1|  381|Caenorhabditis elegans Hypothetical
           protein R07E5.3 protein.
          Length = 381

 Score =  175 bits (426), Expect = 3e-44
 Identities = 92/232 (39%), Positives = 147/232 (63%), Gaps = 7/232 (3%)
 Frame = +1

Query: 67  NTTTKMALRTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEE 246
           +++TK   +TYG +P SF ++E G+ Y +GSE+G YLRL RG+LYKKYP + R+  T+++
Sbjct: 2   SSSTKTLSQTYGPRPQSFSLDEAGERYYIGSEIGAYLRLHRGTLYKKYPLLWRKVATSDD 61

Query: 247 RKRLIDNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKP--H 420
           + +L    +            +A EV+++++G+++KY+A   +   +TPR   + +    
Sbjct: 62  KDKLKQIAMSNAFLHTNIMLLRAHEVDELLDGSEEKYRAAGAAP--STPRTEGASRTVAK 119

Query: 421 TPS--WL--PVMPNSSHLDAVPQATPISRSRVHNKKVRTFPLCFDDTDMTA-MLENASQK 585
           TP+  W    V   S HL++VP + PI+ SR   K  R      +D +M+  +++NA + 
Sbjct: 120 TPATGWAGQQVTSGSHHLESVPCSCPIAHSRGRMKH-RELVYSAEDLEMSKRVMKNAEEG 178

Query: 586 QVLVPIRLDMEIEGQKLRDTFTWNKNESIITPEQFAEVLCDDLELNTSTFIP 741
           + LVPIRLDME++G KLRDTFT+NKNE +ITPE  AE++C+DL+L  + F P
Sbjct: 179 EDLVPIRLDMELDGIKLRDTFTFNKNEKMITPEMIAEIMCEDLDLPLAVFQP 230



 Score = 32.7 bits (71), Expect = 0.28
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +1

Query: 601 IRLDMEIEGQKLRDTFTWNKNESIITPEQFAEVLCDDLEL 720
           ++L++ +  Q L D F W+ ++   +PE+F+  +C +L L
Sbjct: 260 LKLNINVGNQSLVDQFEWDMSDPNNSPEEFSRNICKELGL 299


>Z70034-6|CAA93850.1|  301|Caenorhabditis elegans Hypothetical
           protein C18E9.6 protein.
          Length = 301

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
 Frame = +1

Query: 445 PNSSHLDA-VPQATPISRSRVHNKKVRTFPLCFDDTDMTAMLENASQKQVLVPIRLDMEI 621
           P  S L + +PQ  P S   +H K    FP CF+   +      +S  QV   + L    
Sbjct: 4   PTESELASPIPQTNPGSYEELHRKARDVFPTCFEGAKLMVNKGLSSHFQVSHTLSLSAMN 63

Query: 622 EGQKLRDTFTWNKNESIITPEQFAEVLCDDLELNTST 732
            G +   T+        + P +   +L  D ++N +T
Sbjct: 64  TGYRFGATYVGTNQ---VGPAEAYPILLGDTDVNGNT 97


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
            protein Y40C5A.3 protein.
          Length = 2344

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 367  SVSQELATPRESKSKK--PHTPSWLPVMPNSSHLDAVPQATPISRSRV 504
            SV+Q    P  S S    P  PS LPV P+SS + + P A   S S V
Sbjct: 1613 SVTQAPIPPASSPSAPSIPSIPSTLPVAPSSSSVPSSPSAPSESTSTV 1660


>U41013-2|AAA82300.1|  557|Caenorhabditis elegans Hypothetical
           protein T06C10.3 protein.
          Length = 557

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 21/71 (29%), Positives = 31/71 (43%)
 Frame = +1

Query: 316 SEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISR 495
           ++VE  ++   +  +    SQEL  P E   KK    S L V  +   L  VP+    S 
Sbjct: 76  AKVEGKVKAKVESTQNTDNSQELKAPEEKPKKKKKKKSNLIVSASVEKLSIVPEKEDFS- 134

Query: 496 SRVHNKKVRTF 528
             +  KK+R F
Sbjct: 135 --ILEKKLREF 143


>Z81553-3|CAB04493.1|  136|Caenorhabditis elegans Hypothetical
           protein F56H6.3 protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = -2

Query: 622 QSPCPIESVQAPAFAKHSPALQSCLCHRNTVGMF----SPSYYA 503
           ++P P  +V APA  +HS  + S + +R  VG F    SP Y A
Sbjct: 72  KAPPPASAVAAPASRRHSRRMYSEVRNRERVGRFRTTTSPHYVA 115


>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
            protein Y38E10A.6b protein.
          Length = 1345

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/69 (26%), Positives = 25/69 (36%)
 Frame = +1

Query: 310  KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPI 489
            KA E+E+I E      KA    QE+    +   K P  P  +   P  S      Q  P 
Sbjct: 927  KAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQ 986

Query: 490  SRSRVHNKK 516
               +   K+
Sbjct: 987  KSEKTSEKR 995


>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
            protein Y38E10A.6a protein.
          Length = 1343

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/69 (26%), Positives = 25/69 (36%)
 Frame = +1

Query: 310  KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPI 489
            KA E+E+I E      KA    QE+    +   K P  P  +   P  S      Q  P 
Sbjct: 925  KAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQ 984

Query: 490  SRSRVHNKK 516
               +   K+
Sbjct: 985  KSEKTSEKR 993


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 634  VFDPQSPCPIESVQAPAFAKHSPALQS 554
            VF P+ P  IE+  APA +  SP L+S
Sbjct: 2745 VFSPEVPLRIETEHAPAPSTSSPPLES 2771


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 634  VFDPQSPCPIESVQAPAFAKHSPALQS 554
            VF P+ P  IE+  APA +  SP L+S
Sbjct: 2745 VFSPEVPLRIETEHAPAPSTSSPPLES 2771


>Z70270-7|CAH04652.1|  175|Caenorhabditis elegans Hypothetical
           protein C53D6.10 protein.
          Length = 175

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 376 QELATPRESKSKKPHTPSW-LPVMPNSSHLDAVPQATPISRSRVHNKK 516
           ++ A P   +S  P  P   +P  PN+    A P  TP++     NKK
Sbjct: 18  EKAAIPAFPESNAPSQPEINIPQFPNAQGTGAPPPPTPLANPTEDNKK 65


>U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical
           protein R144.2a protein.
          Length = 823

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 625 PQSPCPIESVQAPAFAKHSPA 563
           PQ P PI  VQAP   +H PA
Sbjct: 374 PQDPAPIVPVQAPPPQQHLPA 394


>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5b protein.
          Length = 1136

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +1

Query: 364 VSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVH 507
           VS+ ++L   +  KSKK  + S  P+ PNS H +     TP+ ++ VH
Sbjct: 732 VSLCEDLKASK--KSKKSRSISSSPIPPNSLHEEET--QTPLRQNMVH 775


>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5a protein.
          Length = 1088

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +1

Query: 364 VSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVH 507
           VS+ ++L   +  KSKK  + S  P+ PNS H +     TP+ ++ VH
Sbjct: 732 VSLCEDLKASK--KSKKSRSISSSPIPPNSLHEEET--QTPLRQNMVH 775


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,868,046
Number of Sequences: 27780
Number of extensions: 396286
Number of successful extensions: 1082
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)