Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30597
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22012| Best HMM Match : ERO1 (HMM E-Value=0) 60 2e-09
SB_9861| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_33735| Best HMM Match : Aminotran_1_2 (HMM E-Value=0.13) 30 2.3
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) 29 4.0
SB_52866| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_17612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_22012| Best HMM Match : ERO1 (HMM E-Value=0)
Length = 400
Score = 60.1 bits (139), Expect = 2e-09
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 2/194 (1%)
Frame = +3
Query: 171 ILFALAIVQAVGYDTELTKPCD-STACFDELHGSLGDCSCKVDTIDFFNNVKIFPRIQSI 347
I + + V V E+ +P S CF +L G + C C V+T+D NN KI P + +
Sbjct: 3 IAISTSFVYLVCLLREIVEPAGLSDQCFCKLKGKVEQCCCDVETVDKINN-KIHPILDEL 61
Query: 348 VTKDYFRFYKVNLKKECPFWADDSRCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATK 527
V ++YF+F++ + + + K + +TC + S T N +D+T +TK
Sbjct: 62 VKRNYFKFFRTS-----NYIMIEITFTFKGKYGETCQESS----NTTLGN--LDDTISTK 110
Query: 528 YSKEAQSDCKSDLDHDPQLSYLNMTISAANQYEIAKWKVHDDAHDNFCE-SXXXXXXXXX 704
K S K L D W+ HD+ +NFC
Sbjct: 111 GLKSFMSSAKDKLAFD-------------------TWRQHDNVEENFCALDDESTTGLQY 151
Query: 705 XXLTLNPERYTGYK 746
L NPE+YTGYK
Sbjct: 152 IDLLRNPEQYTGYK 165
>SB_9861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 31.9 bits (69), Expect = 0.57
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Frame = +3
Query: 312 NNVKIFPRIQSIVTKDYFRFYKVNLKKECPFWADDSRCAMKYCHIKTCTKESVPGYETGY 491
+N +F + + I+++ Y++F V + ++C ++ DD + H + T SVP Y
Sbjct: 196 DNKYVFKQHKLILSR-YYKFSLVFMNQDCDYFVDD-----RLYH--SLTSGSVPVY---M 244
Query: 492 NNEYVDE-TPAT-KYSKEAQSDCKSDLDHDPQLSYLNMTISAANQYEIAKWK 641
++ VD+ P K S SD K + L+YL +A N+Y KWK
Sbjct: 245 GSDKVDQFLPGNLKNSIIKVSDFKGPKELAEYLNYLMTNETAYNKYLEWKWK 296
>SB_33735| Best HMM Match : Aminotran_1_2 (HMM E-Value=0.13)
Length = 383
Score = 29.9 bits (64), Expect = 2.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 483 FHSQVHFPSCKSLYGSISLHTYCHQPRTG 397
FH+++ SC ++YG +++ C P+ G
Sbjct: 226 FHNRMTLYSCPNIYGQVAMGIVCQPPKPG 254
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 231 CDSTACFDELHGSLGDCSCKVDTIDFFNNVKIFPRIQSIVTKDYFRFYKVNLKKECPFWA 410
CD TAC D+ + +C CK +D FNN + S+V K + + +VN + + F++
Sbjct: 788 CDKTACSDKGY----ECFCKSGFLDVFNNTWFY----SLVCKSFGQ--RVNQQFQIDFFS 837
>SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45)
Length = 1133
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +3
Query: 366 RFYKVNLKKECPFWADDSRCAMKYCHIKTCTKESVPGYETGYNNEYVDETPATKYSKEAQ 545
+F +V +++E + D S + + C K S+ G Y++ +P K K +
Sbjct: 751 KFDEVKIQEELSTFYDPSSITLASDY--ACFKYSMGGNLKLYDDHIALSSPKRKIKKPSY 808
Query: 546 SDCKSDLDHD 575
S CK+ D+D
Sbjct: 809 SPCKTGSDYD 818
>SB_52866| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1376
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +3
Query: 342 SIVTKDYFRFY----KVNLKKECPFWADDSR-CAMKYC 440
SI+T+ Y +FY K+ +K C F+ D + A KYC
Sbjct: 589 SIITQKYCKFYLRDGKLAAQKYCKFYLRDGKLAAQKYC 626
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +3
Query: 342 SIVTKDYFRFY----KVNLKKECPFWADDSR-CAMKYC 440
SI+T+ Y +FY K+ +K C F+ D + A KYC
Sbjct: 779 SIITQKYCKFYLRDGKLAAQKYCKFYLRDGKLAAQKYC 816
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 456 TKESVPGYETGYNNEYVDETPATKYSKEAQS--DCKSDLDHDPQLSYLNMTISAANQYE 626
TK GY GYN+ E +++Y + + D D + SY + S+ + YE
Sbjct: 1376 TKGRYNGYSNGYNDNQPKEKRSSEYQDDPRDNRDSYGDYSRSSRSSYEDHPRSSRSSYE 1434
>SB_17612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 285 CKVDTIDFFNNV-KIFPRIQSIVTKDYFRFYKVNLKKECPFWADDSRCAMKYCHI 446
CK T+ F NV K+F +++S + + + K + A S C +K C +
Sbjct: 150 CKYRTVGFEENVTKLFGKLRSAIPRRICKTCKRKIDSGYTLHACASHCGLKTCPV 204
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,797,235
Number of Sequences: 59808
Number of extensions: 453915
Number of successful extensions: 1152
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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