Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30594
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00004D7419 Cluster: Mucolipin-2.; n=1; Xenopus tropi...    33   7.2  
UniRef50_Q6L2H5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q9HLH3 Cluster: Putative uncharacterized protein Ta0255...    33   9.5  

>UniRef50_UPI00004D7419 Cluster: Mucolipin-2.; n=1; Xenopus
           tropicalis|Rep: Mucolipin-2. - Xenopus tropicalis
          Length = 533

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 327 DSEVLVDGCSEWY-NGCPTLQTETHYCFTAEIGGVVVPTLA 446
           +SE  V  C +W+ +GC T Q  THY    + G V++  LA
Sbjct: 258 ESEASVQDCKDWHISGCTTAQKNTHYILLFD-GFVILTCLA 297


>UniRef50_Q6L2H5 Cluster: Putative uncharacterized protein; n=1;
           Picrophilus torridus|Rep: Putative uncharacterized
           protein - Picrophilus torridus
          Length = 329

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = +2

Query: 464 TTLLSRKLYSGLIFI-TRCYSFAVKFNREHF 553
           +++ SR+LYSG++FI  R YSF+ KF  + F
Sbjct: 61  SSIFSRQLYSGMVFIMARAYSFSNKFVEKTF 91


>UniRef50_Q9HLH3 Cluster: Putative uncharacterized protein Ta0255;
           n=3; Thermoplasma|Rep: Putative uncharacterized protein
           Ta0255 - Thermoplasma acidophilum
          Length = 349

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = +3

Query: 258 RCFLDTQRFLFKEGFLWDYDNVQDSEVLVDGCS-EWYNGCPTLQTETHYCFTAEI 419
           R  +D  R L KE  L   DN+ D ++   GC    Y GCP +  +    FT  +
Sbjct: 264 RMLMDRARDLGKEAVLAYTDNISDQDIQNMGCDLAVYTGCPRVPIDDQDRFTVPV 318


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,954,983
Number of Sequences: 1657284
Number of extensions: 16855597
Number of successful extensions: 35676
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35674
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)