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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30593
         (728 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein ...   307   6e-84
At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein ...   301   3e-82
At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein ...   301   3e-82
At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein ...   301   3e-82
At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase, p...   124   8e-29
At3g06850.2 68416.m00813 branched chain alpha-keto acid dehydrog...   103   9e-23
At3g06850.1 68416.m00812 branched chain alpha-keto acid dehydrog...   103   9e-23
At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase, p...   101   6e-22
At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase, p...    99   3e-21
At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase, p...    94   1e-19
At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase (L...    84   1e-16
At2g45630.2 68415.m05674 oxidoreductase family protein low simil...    33   0.15 
At2g45630.1 68415.m05673 oxidoreductase family protein low simil...    33   0.15 
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu...    31   0.78 
At5g60410.2 68418.m07579 DNA-binding family protein contains Pfa...    29   2.4  
At5g60410.1 68418.m07578 DNA-binding family protein contains Pfa...    29   2.4  
At2g06990.1 68415.m00800 HUA enhancer 2 (HEN2) / DExH-box RNA he...    29   2.4  
At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit...    29   3.2  
At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit...    29   3.2  
At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit...    29   3.2  
At3g29180.1 68416.m03657 expressed protein                             29   3.2  
At4g11580.1 68417.m01856 F-box family protein predicted protein,...    29   4.2  
At2g38250.1 68415.m04697 DNA-binding protein-related contains si...    28   5.5  
At2g29900.1 68415.m03631 presenilin family protein similar to pr...    28   7.3  
At1g70620.1 68414.m08138 cyclin-related contains weak similarity...    28   7.3  
At1g04200.1 68414.m00410 expressed protein Contains similarity t...    28   7.3  
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu...    27   9.6  
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu...    27   9.6  

>At5g55070.1 68418.m06864 2-oxoacid dehydrogenase family protein
           similar to SP|Q01205 Dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex, mitochondrial precursor (EC
           2.3.1.61) {Rattus norvegicus}; contains Pfam profiles
           PF00198: 2-oxo acid dehydrogenases acyltransferase
           (catalytic domain), PF00364: Biotin-requiring enzyme
          Length = 464

 Score =  307 bits (753), Expect = 6e-84
 Identities = 143/215 (66%), Positives = 178/215 (82%)
 Frame = +2

Query: 2   IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALM 181
           +A RLKD+QNT A+LTTFNE+DM+++M  R ++ D F +KH +KLGLMS F+KAA +AL 
Sbjct: 247 VATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFLEKHGVKLGLMSGFIKAAVSALQ 306

Query: 182 DQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKAR 361
            QPVVNAVI+ ++IIYRDYVDIS+AV T KGLVVPVIR+   M +ADIE TI GLA+KA 
Sbjct: 307 HQPVVNAVIDGDDIIYRDYVDISIAVGTSKGLVVPVIRDADKMNFADIEKTINGLAKKAT 366

Query: 362 TGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAILGMHGIFERPIALNGQVVIRPM 541
            G ++I+EM GG+FT+SNGGV+GSL+ TPIINPPQSAILGMH I +RP+ + G VV RPM
Sbjct: 367 EGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSAILGMHSIVQRPMVVGGSVVPRPM 426

Query: 542 MYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIV 646
           MY+ALTYDHRLIDGREAV FLR+IK+ VEDP  ++
Sbjct: 427 MYVALTYDHRLIDGREAVYFLRRIKDVVEDPQRLL 461


>At4g26910.3 68417.m03871 2-oxoacid dehydrogenase family protein
           similar to SP|P36957 Dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex, mitochondrial precursor (EC
           2.3.1.61) {Homo sapiens}; contains Pfam profiles
           PF00198: 2-oxo acid dehydrogenases acyltransferase
           (catalytic domain), PF00364: Biotin-requiring enzyme
          Length = 365

 Score =  301 bits (739), Expect = 3e-82
 Identities = 140/215 (65%), Positives = 175/215 (81%)
 Frame = +2

Query: 2   IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALM 181
           +A RLKD+QNT A+LTTFNE+DM+++M  R ++ D F +KH +KLGLMS F+KAA +AL 
Sbjct: 148 VATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFYEKHGVKLGLMSGFIKAAVSALQ 207

Query: 182 DQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKAR 361
            QPVVNAVI+ ++IIYRDYVDIS+AV T KGLVVPVIR    M +A+IE TI  LA+KA 
Sbjct: 208 HQPVVNAVIDGDDIIYRDYVDISIAVGTSKGLVVPVIRGADKMNFAEIEKTINSLAKKAN 267

Query: 362 TGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAILGMHGIFERPIALNGQVVIRPM 541
            G ++I+EM GG+FT+SNGGV+GSL+ TPIINPPQSAILGMH I  RP+ + G VV RPM
Sbjct: 268 EGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSAILGMHSIVSRPMVVGGSVVPRPM 327

Query: 542 MYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIV 646
           MY+ALTYDHRLIDGREAV FLR++K+ VEDP  ++
Sbjct: 328 MYVALTYDHRLIDGREAVYFLRRVKDVVEDPQRLL 362


>At4g26910.2 68417.m03873 2-oxoacid dehydrogenase family protein
           similar to SP|P36957 Dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex, mitochondrial precursor (EC
           2.3.1.61) {Homo sapiens}; contains Pfam profiles
           PF00198: 2-oxo acid dehydrogenases acyltransferase
           (catalytic domain), PF00364: Biotin-requiring enzyme
          Length = 463

 Score =  301 bits (739), Expect = 3e-82
 Identities = 140/215 (65%), Positives = 175/215 (81%)
 Frame = +2

Query: 2   IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALM 181
           +A RLKD+QNT A+LTTFNE+DM+++M  R ++ D F +KH +KLGLMS F+KAA +AL 
Sbjct: 246 VATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFYEKHGVKLGLMSGFIKAAVSALQ 305

Query: 182 DQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKAR 361
            QPVVNAVI+ ++IIYRDYVDIS+AV T KGLVVPVIR    M +A+IE TI  LA+KA 
Sbjct: 306 HQPVVNAVIDGDDIIYRDYVDISIAVGTSKGLVVPVIRGADKMNFAEIEKTINSLAKKAN 365

Query: 362 TGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAILGMHGIFERPIALNGQVVIRPM 541
            G ++I+EM GG+FT+SNGGV+GSL+ TPIINPPQSAILGMH I  RP+ + G VV RPM
Sbjct: 366 EGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSAILGMHSIVSRPMVVGGSVVPRPM 425

Query: 542 MYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIV 646
           MY+ALTYDHRLIDGREAV FLR++K+ VEDP  ++
Sbjct: 426 MYVALTYDHRLIDGREAVYFLRRVKDVVEDPQRLL 460


>At4g26910.1 68417.m03872 2-oxoacid dehydrogenase family protein
           similar to SP|P36957 Dihydrolipoamide
           succinyltransferase component of 2-oxoglutarate
           dehydrogenase complex, mitochondrial precursor (EC
           2.3.1.61) {Homo sapiens}; contains Pfam profiles
           PF00198: 2-oxo acid dehydrogenases acyltransferase
           (catalytic domain), PF00364: Biotin-requiring enzyme
          Length = 464

 Score =  301 bits (739), Expect = 3e-82
 Identities = 140/215 (65%), Positives = 175/215 (81%)
 Frame = +2

Query: 2   IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALM 181
           +A RLKD+QNT A+LTTFNE+DM+++M  R ++ D F +KH +KLGLMS F+KAA +AL 
Sbjct: 247 VATRLKDSQNTFALLTTFNEVDMTNLMKLRSQYKDAFYEKHGVKLGLMSGFIKAAVSALQ 306

Query: 182 DQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKAR 361
            QPVVNAVI+ ++IIYRDYVDIS+AV T KGLVVPVIR    M +A+IE TI  LA+KA 
Sbjct: 307 HQPVVNAVIDGDDIIYRDYVDISIAVGTSKGLVVPVIRGADKMNFAEIEKTINSLAKKAN 366

Query: 362 TGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAILGMHGIFERPIALNGQVVIRPM 541
            G ++I+EM GG+FT+SNGGV+GSL+ TPIINPPQSAILGMH I  RP+ + G VV RPM
Sbjct: 367 EGTISIDEMAGGSFTVSNGGVYGSLISTPIINPPQSAILGMHSIVSRPMVVGGSVVPRPM 426

Query: 542 MYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIV 646
           MY+ALTYDHRLIDGREAV FLR++K+ VEDP  ++
Sbjct: 427 MYVALTYDHRLIDGREAVYFLRRVKDVVEDPQRLL 461


>At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase,
            putative similar to dihydrolipoamide acetyltransferase
            (E2) subunit of PDC [Arabidopsis thaliana] GI:559395;
            contains Pfam profiles PF00198: 2-oxo acid dehydrogenases
            acyltransferase (catalytic domain), PF00364:
            Biotin-requiring enzyme, PF02817: e3 binding domain;
            supporting cDNA gi|5881964|gb|AF066080.1|AF066080
          Length = 637

 Score =  124 bits (298), Expect = 8e-29
 Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 7/217 (3%)
 Frame = +2

Query: 2    IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANALM 181
            IA+RL +++     L   +++ +  ++AFRK+      + H +K+ +    +KA A AL 
Sbjct: 419  IAKRLLESKQKIPHLYLQSDVVLDPLLAFRKE----LQENHGVKVSVNDIVIKAVAVALR 474

Query: 182  DQPVVNAV--IEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELTIAGLAEK 355
            +    NA    E+ +I+  D VDIS+AVAT KGL+ P+I+N    + + I L +  LA+K
Sbjct: 475  NVRQANAFWDAEKGDIVMCDSVDISIAVATEKGLMTPIIKNADQKSISAISLEVKELAQK 534

Query: 356  ARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAILGM---HGIFERPIALNG-- 520
            AR+GKL   E  GGTF+ISN G++       IINPPQ+ IL +   + + E  I L+G  
Sbjct: 535  ARSGKLAPHEFQGGTFSISNLGMYPVDNFCAIINPPQAGILAVGRGNKVVEPVIGLDGIE 594

Query: 521  QVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVED 631
            +  +   M + L+ DHR+ DG+    F+ +++   ED
Sbjct: 595  KPSVVTKMNVTLSADHRIFDGQVGASFMSELRSNFED 631


>At3g06850.2 68416.m00813 branched chain alpha-keto acid
           dehydrogenase E2 subunit (din3) identical to branched
           chain alpha-keto acid dehydrogenase E2 subunit (din3)
           [Arabidopsis thaliana] GI:7021284
          Length = 483

 Score =  103 bits (248), Expect = 9e-23
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
 Frame = +2

Query: 125 SIKLGLMSPFVKAAANALMDQPVVNAVI--EENEIIYRDYVDISVAVATPKGLVVPVIRN 298
           +IK   +   +K+ + AL   P VN+    E  EII +   +I VA+AT  GLVVP I+N
Sbjct: 303 TIKHTFLPTLIKSLSMALTKYPFVNSCFNAESLEIILKGSHNIGVAMATEHGLVVPNIKN 362

Query: 299 VQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAIL 478
           VQ+++  +I   ++ L   A   KL  E++ GGT T+SN G  G   G+P++N P+ AI+
Sbjct: 363 VQSLSLLEITKELSRLQHLAANNKLNPEDVTGGTITLSNIGAIGGKFGSPLLNLPEVAII 422

Query: 479 GMHGIFERP-IALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIV 646
            +  I + P  +  G V    +M + +  DHR++DG     F  + KE VE P  ++
Sbjct: 423 ALGRIEKVPKFSKEGTVYPASIMMVNIAADHRVLDGATVARFCCQWKEYVEKPELLM 479


>At3g06850.1 68416.m00812 branched chain alpha-keto acid
           dehydrogenase E2 subunit (din3) identical to branched
           chain alpha-keto acid dehydrogenase E2 subunit (din3)
           [Arabidopsis thaliana] GI:7021284
          Length = 483

 Score =  103 bits (248), Expect = 9e-23
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 3/177 (1%)
 Frame = +2

Query: 125 SIKLGLMSPFVKAAANALMDQPVVNAVI--EENEIIYRDYVDISVAVATPKGLVVPVIRN 298
           +IK   +   +K+ + AL   P VN+    E  EII +   +I VA+AT  GLVVP I+N
Sbjct: 303 TIKHTFLPTLIKSLSMALTKYPFVNSCFNAESLEIILKGSHNIGVAMATEHGLVVPNIKN 362

Query: 299 VQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAIL 478
           VQ+++  +I   ++ L   A   KL  E++ GGT T+SN G  G   G+P++N P+ AI+
Sbjct: 363 VQSLSLLEITKELSRLQHLAANNKLNPEDVTGGTITLSNIGAIGGKFGSPLLNLPEVAII 422

Query: 479 GMHGIFERP-IALNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIV 646
            +  I + P  +  G V    +M + +  DHR++DG     F  + KE VE P  ++
Sbjct: 423 ALGRIEKVPKFSKEGTVYPASIMMVNIAADHRVLDGATVARFCCQWKEYVEKPELLM 479


>At1g54220.1 68414.m06182 dihydrolipoamide S-acetyltransferase,
           putative similar to dihydrolipoamide S-acetyltransferase
           GI:5669871 [Zea mays]; contains Pfam profiles PF00198:
           2-oxo acid dehydrogenases acyltransferase (catalytic
           domain), PF00364: Biotin-requiring enzyme, PF02817: e3
           binding domain
          Length = 539

 Score =  101 bits (241), Expect = 6e-22
 Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 4/194 (2%)
 Frame = +2

Query: 77  IMAFRKKHLDTFTKKHSIK-LGLMSPFVKAAANALMDQPVVNAVIEENEIIYRDYVDISV 253
           +MA R + L++F +    K + +    VKAAA AL   P  N+   ++ I     V+I+V
Sbjct: 346 LMALRSQ-LNSFKEASGGKRISVNDLVVKAAALALRKVPQCNSSWTDDYIRQFKNVNINV 404

Query: 254 AVATPKGLVVPVIRNVQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISN-GGVFG 430
           AV T  GL VPV+++      + I   +  LA+KA+   L  E+ +GGTFT+SN GG FG
Sbjct: 405 AVQTENGLYVPVVKDADRKGLSTIGEEVRLLAQKAKENSLKPEDYEGGTFTVSNLGGPFG 464

Query: 431 SLMGTPIINPPQSAILGMHGIFERPIALNG--QVVIRPMMYIALTYDHRLIDGREAVLFL 604
                 ++NPPQ+AIL +    +R +  NG  Q      M + L+ DHR++DG     +L
Sbjct: 465 IKQFCAVVNPPQAAILAVGSAEKRVVPGNGPDQFNFASYMPVTLSCDHRVVDGAIGAEWL 524

Query: 605 RKIKEGVEDPATIV 646
           +  K  +E+P +++
Sbjct: 525 KAFKGYIENPKSML 538


>At3g13930.1 68416.m01759 dihydrolipoamide S-acetyltransferase,
           putative similar to dihydrolipoamide S-acetyltransferase
           [Zea mays] GI:5669871; contains Pfam profiles PF00198:
           2-oxo acid dehydrogenases acyltransferase (catalytic
           domain), PF00364: Biotin-requiring enzyme, PF02817: e3
           binding domain
          Length = 539

 Score = 98.7 bits (235), Expect = 3e-21
 Identities = 61/167 (36%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
 Frame = +2

Query: 155 VKAAANALMDQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELT 334
           +KAAA AL   P  N+   +  I     V+I+VAV T  GL VPV+++      + I   
Sbjct: 372 IKAAALALRKVPQCNSSWTDEYIRQFKNVNINVAVQTENGLYVPVVKDADKKGLSTIGEE 431

Query: 335 IAGLAEKARTGKLTIEEMDGGTFTISN-GGVFGSLMGTPIINPPQSAILGMHGIFERPIA 511
           +  LA+KA+   L  E+ +GGTFT+SN GG FG      +INPPQ+AIL +    +R + 
Sbjct: 432 VRFLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVINPPQAAILAIGSAEKRVVP 491

Query: 512 LNG--QVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPATIV 646
             G  Q  +   M + L+ DHR+IDG     +L+  K  +E P +++
Sbjct: 492 GTGPDQYNVASYMSVTLSCDHRVIDGAIGAEWLKAFKGYIETPESML 538


>At1g34430.1 68414.m04277 dihydrolipoamide S-acetyltransferase,
           putative similar to dihydrolipoamide S-acetyltransferase
           (LTA2) [Arabidopsis thaliana] GI:5881963; contains Pfam
           profiles PF00198: 2-oxo acid dehydrogenases
           acyltransferase (catalytic domain), PF00364:
           Biotin-requiring enzyme, PF02817: e3 binding domain
          Length = 465

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 3/181 (1%)
 Frame = +2

Query: 101 LDTFTKKHSIKLGLMSPFV-KAAANALMDQPVVNAVIEE-NEIIYRDYVDISVAVATPKG 274
           LD   KK   K   M+  + KA A AL   PVVN+   + N  +Y   ++++VAVA   G
Sbjct: 280 LDALYKKIKSKGVTMTALLAKATALALAKHPVVNSSCRDGNSFVYNSSINVAVAVAIDGG 339

Query: 275 LVVPVIRNVQNMTYADIELTIAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPII 454
           L+ PV++N   +    +      L +KAR  +L  +E + GTFT+SN G+FG      I+
Sbjct: 340 LITPVLQNADKVDIYSLSRKWKELVDKARAKQLQPQEYNTGTFTLSNLGMFGVDRFDAIL 399

Query: 455 NPPQSAILGMHGIFERPIAL-NGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVED 631
            P   AI+ +       +A  +G++ ++  M + +T DHR+I G +   FL+ +   +ED
Sbjct: 400 PPGTGAIMAVGASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLASIIED 459

Query: 632 P 634
           P
Sbjct: 460 P 460


>At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase
           (LTA2) identical to dihydrolipoamide S-acetyltransferase
           (LTA2) [Arabidopsis thaliana] GI:5881963
          Length = 480

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
 Frame = +2

Query: 158 KAAANALMDQPVVNAVIEENEII-YRDYVDISVAVATPKGLVVPVIRNVQNMTYADIELT 334
           KAA  AL   PVVNA  ++ +   Y   ++I+VAVA   GL+ PV+++   +    +   
Sbjct: 315 KAAGMALAQHPVVNASCKDGKSFSYNSSINIAVAVAINGGLITPVLQDADKLDLYLLSQK 374

Query: 335 IAGLAEKARTGKLTIEEMDGGTFTISNGGVFGSLMGTPIINPPQSAILGMHGIFERPIA- 511
              L  KAR+ +L   E + GTFT+SN G+FG      I+ P Q AI+ +       +A 
Sbjct: 375 WKELVGKARSKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVVAD 434

Query: 512 LNGQVVIRPMMYIALTYDHRLIDGREAVLFLRKIKEGVEDPATI 643
            +G   ++  M + +T DHR++ G +   FL+   + +E+P ++
Sbjct: 435 KDGFFSVKNTMLVNVTADHRIVYGADLAAFLQTFAKIIENPDSL 478


>At2g45630.2 68415.m05674 oxidoreductase family protein low
           similarity to SP|P36234 Glycerate dehydrogenase (EC
           1.1.1.29) (NADH-dependent hydroxypyruvate reductase)
           {Hyphomicrobium methylovorum}; contains Pfam profile
           PF00389: D-isomer specific 2-hydroxyacid dehydrogenase,
           catalytic domain
          Length = 338

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 130 DAVLLSEGVEVLLTECHDVGHVDLVECRQHGVRVLSVLQTLSD 2
           D + +   + +++T    V HVDLVECR+ G+ V +   + S+
Sbjct: 83  DLIRILPNLRLVVTTSAGVDHVDLVECRRRGISVANAGSSFSE 125


>At2g45630.1 68415.m05673 oxidoreductase family protein low
           similarity to SP|P36234 Glycerate dehydrogenase (EC
           1.1.1.29) (NADH-dependent hydroxypyruvate reductase)
           {Hyphomicrobium methylovorum}; contains Pfam profile
           PF00389: D-isomer specific 2-hydroxyacid dehydrogenase,
           catalytic domain
          Length = 186

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -2

Query: 130 DAVLLSEGVEVLLTECHDVGHVDLVECRQHGVRVLSVLQTLSD 2
           D + +   + +++T    V HVDLVECR+ G+ V +   + S+
Sbjct: 83  DLIRILPNLRLVVTTSAGVDHVDLVECRRRGISVANAGSSFSE 125


>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
           putative
          Length = 506

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
 Frame = +1

Query: 109 LH*EAQHQTRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRY-FGSGRHTERSRRA 285
           +H   +H +       +  R+ P G   G+R +R +RD+  G R++     R  ER  R 
Sbjct: 386 VHETPKHNSHERERSEKIQRRSPHGNGEGKRQHRDERDD--GRRQHDREDARELERKHRE 443

Query: 286 GHQKRSEHDLC*YRAHHSWASGKSENR*AHDRRNGRRNVHHQQWRRFR 429
             ++ S  D    R      S   E+R   D  + R +  +++ RR R
Sbjct: 444 RKERESREDEDRRRRRRREESRDKESRRERDEDDHRSHRDYKERRRER 491


>At5g60410.2 68418.m07579 DNA-binding family protein contains Pfam
           profiles: PF02037 SAP domain, PF02891 MIZ zinc finger,
           PF00628 PHD-finger
          Length = 885

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 2   IAQRLKDAQNTN-AMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANAL 178
           I+ RL D+ + N     T N I+ SH M+ R+  +DT T+  S+ LG+       A    
Sbjct: 787 ISLRLGDSASGNHGDPATTNGINSSHQMSTREGSMDTTTETASLLLGMNDSRQDKAKKQR 846

Query: 179 MDQP 190
            D P
Sbjct: 847 SDNP 850


>At5g60410.1 68418.m07578 DNA-binding family protein contains Pfam
           profiles: PF02037 SAP domain, PF02891 MIZ zinc finger,
           PF00628 PHD-finger
          Length = 873

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 2   IAQRLKDAQNTN-AMLTTFNEIDMSHIMAFRKKHLDTFTKKHSIKLGLMSPFVKAAANAL 178
           I+ RL D+ + N     T N I+ SH M+ R+  +DT T+  S+ LG+       A    
Sbjct: 787 ISLRLGDSASGNHGDPATTNGINSSHQMSTREGSMDTTTETASLLLGMNDSRQDKAKKQR 846

Query: 179 MDQP 190
            D P
Sbjct: 847 SDNP 850


>At2g06990.1 68415.m00800 HUA enhancer 2 (HEN2) / DExH-box RNA
           helicase, putative nearly identical to HUA enhancer 2
           [Arabidopsis thaliana] GI:16024936
          Length = 995

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 241 RYFGSGRHTERSRRAGHQKRSEHDLC 318
           RY GSG + + S RAG + + E  +C
Sbjct: 460 RYIGSGEYIQMSGRAGRRGKDERGIC 485


>At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit,
           putative similar to U2 snRNP auxiliary factor, large
           subunit [Nicotiana plumbaginifolia] GI:3850823
          Length = 565

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 26/68 (38%), Positives = 34/68 (50%)
 Frame = +1

Query: 103 RHLH*EAQHQTRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRYFGSGRHTERSRR 282
           RH H  ++H+  S    RE G +R  G  R +  YRR RD     RR    GR + RS R
Sbjct: 96  RH-HRSSRHRDHS----RERGERRERG-GRDDDDYRRSRDRDHDRRRDDRGGRRSRRS-R 148

Query: 283 AGHQKRSE 306
           +  + RSE
Sbjct: 149 SRSKDRSE 156


>At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit,
           putative similar to U2 snRNP auxiliary factor, large
           subunit [Nicotiana plumbaginifolia] GI:3850823
          Length = 542

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 26/68 (38%), Positives = 34/68 (50%)
 Frame = +1

Query: 103 RHLH*EAQHQTRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRYFGSGRHTERSRR 282
           RH H  ++H+  S    RE G +R  G  R +  YRR RD     RR    GR + RS R
Sbjct: 96  RH-HRSSRHRDHS----RERGERRERG-GRDDDDYRRSRDRDHDRRRDDRGGRRSRRS-R 148

Query: 283 AGHQKRSE 306
           +  + RSE
Sbjct: 149 SRSKDRSE 156


>At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit,
           putative similar to U2 snRNP auxiliary factor, large
           subunit [Nicotiana plumbaginifolia] GI:3850823
          Length = 573

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 26/68 (38%), Positives = 34/68 (50%)
 Frame = +1

Query: 103 RHLH*EAQHQTRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRYFGSGRHTERSRR 282
           RH H  ++H+  S    RE G +R  G  R +  YRR RD     RR    GR + RS R
Sbjct: 96  RH-HRSSRHRDHS----RERGERRERG-GRDDDDYRRSRDRDHDRRRDDRGGRRSRRS-R 148

Query: 283 AGHQKRSE 306
           +  + RSE
Sbjct: 149 SRSKDRSE 156


>At3g29180.1 68416.m03657 expressed protein
          Length = 513

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = -2

Query: 430 PENAAIADGERSAVHFFDRELTGSR----FFR*PSYGELDISISHVLNVSDDRHDETFRC 263
           PE+ A++  E+  V  ++ +   SR    FF+ P+Y E+D+ + H  +    +  E FR 
Sbjct: 400 PEDLALSSTEKKLVQAYNEKPVLSRPQHNFFKGPNYFEIDLDV-HRFSYISRKGLEAFR- 457

Query: 262 GDRYRN 245
            DR +N
Sbjct: 458 -DRLKN 462


>At4g11580.1 68417.m01856 F-box family protein predicted protein,
           Caenorhabditis elegans, PIR2:S44609 ; similar to SKP1
           interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
          Length = 333

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +2

Query: 2   IAQRLKDAQNTNAMLTTFNEIDMSHIMAFRKKHLDTFTKKHSI--KLGLMSPFVKAAANA 175
           +A   K   NT   LT   E+D+S I  F+ K    F  KH +  K GL +   K  +  
Sbjct: 47  LASHNKTLWNT-VDLTNLQELDVSRIFNFKDKERPIFFYKHPVDHKHGLTNLLTKIISRF 105

Query: 176 LMD 184
            +D
Sbjct: 106 FLD 108


>At2g38250.1 68415.m04697 DNA-binding protein-related contains
           similarity to DNA-binding protein GI:170271 from
           [Nicotiana tabacum]
          Length = 289

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +1

Query: 124 QHQTRSDVTFREGGRQRPDGPARGERCYRRKRDNL*GLRRYF-GSGRHTERSRRAGHQKR 300
           +HQ R +  +REG   R    A  E  +RRK + L   R       R  E  RR+  + R
Sbjct: 209 RHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAMERMWRDREEQRRSREEMR 268

Query: 301 SE 306
           +E
Sbjct: 269 AE 270


>At2g29900.1 68415.m03631 presenilin family protein similar to
           presenilin [Drosophila melanogaster] GI:2062395;
           contains Pfam profile PF01080: Presenilin
          Length = 397

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 382 RNGRRNVHHQQWRRFRVSDGNANHQSASICYTGYA--RHLRAAHRSE 516
           RN  R+V  + WR  R S  NAN     +  +      H+ ++ R+E
Sbjct: 235 RNDSRSVQRRVWREQRSSQNNANRNEVRVVESAEVEEEHVGSSERAE 281


>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
           Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
           I) [Bos taurus]
          Length = 897

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +1

Query: 250 GSGRHTERSRRAGHQKRSEHDLC*YRAHHSWASGKSENR*AHDRRNGRR 396
           G  R    S R+ H K S+H    Y +H    S +S +R     R  R+
Sbjct: 849 GKSRRRHVSSRSPHSKHSQHKNTLYSSHDKSRSKRSRSRSRSPHRRHRK 897


>At1g04200.1 68414.m00410 expressed protein Contains similarity to
           gb|Z69902 from C. elegans
          Length = 732

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 703 LLSSFVMVGWCLS*ILQASDDSGGIF 626
           L    + + WCL  +LQASDD   ++
Sbjct: 73  LAKLLIHLSWCLQELLQASDDQSSLY 98


>At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacum,
           EMBL:AB009883
          Length = 918

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +2

Query: 161 AAANALMDQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQ 304
           AA+NAL  Q  V  V  +  +    ++  S+++   KGL  P+  + +
Sbjct: 738 AASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLFTSAR 785


>At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacum,
           EMBL:AB009883
          Length = 918

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +2

Query: 161 AAANALMDQPVVNAVIEENEIIYRDYVDISVAVATPKGLVVPVIRNVQ 304
           AA+NAL  Q  V  V  +  +    ++  S+++   KGL  P+  + +
Sbjct: 738 AASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLFTSAR 785


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,829,143
Number of Sequences: 28952
Number of extensions: 337708
Number of successful extensions: 1009
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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