Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30592
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.4  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 383 IITYLAYYTMTFYAA*LPIRIEYLCTGQCFQFFC 484
           ++T LA     +YA   P++  Y+CT       C
Sbjct: 158 VLTILAISFERYYAICKPLKAGYICTKTRASLIC 191


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +2

Query: 383 IITYLAYYTMTFYAA*LPIRIEYLCTGQCFQFFC 484
           ++T LA     +YA   P++  Y+CT       C
Sbjct: 158 VLTILAISFERYYAICKPLKAGYICTKTRASLIC 191


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 534 VHIHIVFRYHFN 569
           +H  + FRYHFN
Sbjct: 157 IHPGMTFRYHFN 168


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 225 SHLCCFIKSILYFISFCKFVNH 290
           SH C F+ S  +F S+  ++++
Sbjct: 113 SHYCLFVASNCFFWSYQSYMSY 134


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 225 SHLCCFIKSILYFISFCKFVNH 290
           SH C F+ S  +F S+  ++++
Sbjct: 113 SHYCLFVASNCFFWSYQSYMSY 134


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 228 HLCCFIKSILYFISFCKFVNHF 293
           HLC  +   L +I    F+N+F
Sbjct: 276 HLCFLLDEKLSYIILTSFLNNF 297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,229
Number of Sequences: 336
Number of extensions: 3259
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)