Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30588
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   1.8  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   4.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.4  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.8  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 467 SAGYCVYSSTMRRSDFRIRIVNSCFAHRHGWGLYD 571
           +AG  + +  +  S  R  +++SC +    WG YD
Sbjct: 106 NAGNAILNGIVASSKLRASLISSCLSFFSQWG-YD 139


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 312 PHAGYLPQPPIYGALGFG 365
           P  GY P  P   A G+G
Sbjct: 62  PTTGYYPYDPALAAYGYG 79


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 452 GRDIVSAGYCVYSSTMRRSDFRIRIVNSCFA 544
           G DI   G   Y + +   D R+  VNS  A
Sbjct: 103 GEDIGDDGNIKYRTILESVDHRLAFVNSAQA 133


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 595 NVISVRGNVIQTPSMSMCETAINN 524
           ++ S RGN   TPS +   T  NN
Sbjct: 120 DISSTRGNNNNTPSATNNNTNFNN 143


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 595 NVISVRGNVIQTPSMSMCETAINN 524
           ++ S RGN   TPS +   T  NN
Sbjct: 68  DISSTRGNNNNTPSATNNNTNFNN 91


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 595 NVISVRGNVIQTPSMSMCETAINN 524
           ++ S RGN   TPS +   T  NN
Sbjct: 251 DISSTRGNNNNTPSATNNNTNFNN 274


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -1

Query: 274 VEINSDTICL 245
           +EINSDT+C+
Sbjct: 147 MEINSDTMCV 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,951
Number of Sequences: 336
Number of extensions: 3810
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)