Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30586
(713 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 128 2e-28
UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Anther... 83 5e-15
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 45 0.002
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 42 0.011
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 40 0.046
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 36 0.99
UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales b... 36 1.3
UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome sh... 35 1.7
UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2; S... 35 1.7
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 35 1.7
UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix p... 34 4.0
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 34 4.0
UniRef50_Q6FX55 Cluster: Similarities with sp|P36170 Saccharomyc... 34 4.0
UniRef50_Q6NIH0 Cluster: Putative DNA methylase; n=3; Actinomyce... 33 5.3
UniRef50_Q2ADU4 Cluster: ATPase; n=1; Halothermothrix orenii H 1... 33 5.3
UniRef50_Q0USD8 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 5.3
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 33 5.3
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 33 9.2
UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-direct... 33 9.2
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-like
protein; n=9; cellular organisms|Rep: Endonuclease and
reverse transcriptase-like protein - Bombyx mori (Silk
moth)
Length = 960
Score = 128 bits (308), Expect = 2e-28
Identities = 58/91 (63%), Positives = 71/91 (78%)
Frame = -3
Query: 615 RFCRIAVEAPWFVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGNYIPDP 436
RFCR+AV APWFVRNVDLHDDL LES K+M+S S R+FDKA RH+N LIVAA +Y P+P
Sbjct: 846 RFCRLAVGAPWFVRNVDLHDDLGLESIRKHMKSVSERYFDKAMRHDNRLIVAAADYSPNP 905
Query: 435 AERMESSRRRPKHVISDPPDPLTVLLGTSST 343
S RRRP+HV++DP DP+T+ L T S+
Sbjct: 906 DHAGASHRRRPRHVLTDPSDPITLALDTFSS 936
>UniRef50_Q4W4D1 Cluster: Reverse transcriptase-like; n=1; Antheraea
mylitta|Rep: Reverse transcriptase-like - Antheraea
mylitta (Tasar silkworm)
Length = 186
Score = 83.4 bits (197), Expect = 5e-15
Identities = 37/89 (41%), Positives = 56/89 (62%)
Frame = -3
Query: 627 VHRFRFCRIAVEAPWFVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGNY 448
V + R R PW++R VDLH +L++ S Y++S ++ +F+KAA H +PL+V+A NY
Sbjct: 53 VFQNRVLRKVTGTPWYIRRVDLHRNLEIPSIWTYVKSLTISYFEKAANHPSPLVVSAANY 112
Query: 447 IPDPAERMESSRRRPKHVISDPPDPLTVL 361
P P RRRP+H+ DPPD +T +
Sbjct: 113 QPVP--NAARPRRRPRHIFIDPPDEITAV 139
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = -3
Query: 615 RFCRIAVEAPWFVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGNYIPDP 436
+ R+ WFVRN LH DL L + + S R+ D+ RH N L A P
Sbjct: 827 KVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLASALNR--SRP 884
Query: 435 AERMESSRRRPKHVISDPP 379
R+ +RR+P+ +I+ P
Sbjct: 885 PRRL--NRRQPRDLITRSP 901
>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
Length = 191
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -3
Query: 438 PAERMESSRRRPKHVISDPPDPLTVLLGTSSTGH 337
P + SRR P HV+SDP D L+VLL SSTG+
Sbjct: 26 PRDGATKSRRHPNHVLSDPRDSLSVLLDLSSTGY 59
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 40.3 bits (90), Expect = 0.046
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 615 RFCRIAVEAPWFVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPL 469
R RI APW++RN ++H DL ++ + + ++ +K H NPL
Sbjct: 818 RILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKLTTHTNPL 866
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 35.9 bits (79), Expect = 0.99
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 618 FRFCRIAVEAPWFVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGNY 448
FR R ++ PW++RN + ++ + S ++ + + D H NP IVA Y
Sbjct: 1153 FRMLRSILDIPWYIRNKQILKEVAITSPNQAAPIFAAKLHDSMKNHCNPTIVATTTY 1209
>UniRef50_A5KUR9 Cluster: VCBS repeat protein; n=1; Vibrionales
bacterium SWAT-3|Rep: VCBS repeat protein - Vibrionales
bacterium SWAT-3
Length = 4022
Score = 35.5 bits (78), Expect = 1.3
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = -3
Query: 582 FVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGNYIPDPAERMESSRRRP 403
F + D HD + + + + S+ H D LI A G IP A+ + +
Sbjct: 1709 FTHSTDGHDKWSYSADNSHAEVQSLSHGDSLT-DTITLITADGTRIPLTAKILGTD---- 1763
Query: 402 KHVISDPPDPLTVLLGTS 349
HVI D PD LT LGT+
Sbjct: 1764 DHVIIDTPDALTAALGTA 1781
>UniRef50_Q4SIK3 Cluster: Chromosome 5 SCAF14581, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 5
SCAF14581, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 156
Score = 35.1 bits (77), Expect = 1.7
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -3
Query: 567 DLHDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGNYIPDPA----ERMESSRRRPK 400
+L D D E + S H + A P I+A G Y+ P+ ++E R R
Sbjct: 81 ELTDMSDQELAEVFADSDEEAHSESPAGSYQP-IIARGGYMRSPSWTRCSKVEPPRERKH 139
Query: 399 HVISDPPDPLTVL 361
H SD PDPL L
Sbjct: 140 HSDSDTPDPLMKL 152
>UniRef50_P38321 Cluster: Uncharacterized protein YBR225W; n=2;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YBR225W - Saccharomyces cerevisiae (Baker's yeast)
Length = 900
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 486 RHENPLIVAAGNYIPDPA---ERMESSRRRPKHVISDPPDPLTVLL 358
+H NP I N I DP ++++ P+ VISDP D + +LL
Sbjct: 357 QHSNPTISTTSNKISDPTLYIQQLDIEANSPRPVISDPLDEIDILL 402
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 35.1 bits (77), Expect = 1.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 615 RFCRIAVEAPWFVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPL 469
R R + P++VR LH DL+L + + + + R+ D+ RH + L
Sbjct: 833 RAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHHSIL 881
>UniRef50_UPI00004DAE67 Cluster: Class B basic helix-loop-helix
protein 4 (bHLHB4).; n=1; Xenopus tropicalis|Rep: Class
B basic helix-loop-helix protein 4 (bHLHB4). - Xenopus
tropicalis
Length = 195
Score = 33.9 bits (74), Expect = 4.0
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = -3
Query: 615 RFCRIAVEAPWFVRNVDLHDDLD-LESTSKYMQSASMRHFDKAARHENPLIVAAGNYIPD 439
R R+++ A R DL+D LD L S Y S S+R K A ++ A NYI
Sbjct: 88 RSLRLSINARERRRMHDLNDALDGLRSVIPYAHSPSVRKLSKIAT-----LLLAKNYILM 142
Query: 438 PAERMESSRRRPKHVISDPP 379
A+ +E RR ++ PP
Sbjct: 143 QAQALEEMRRLVAYLNQGPP 162
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1103
Score = 33.9 bits (74), Expect = 4.0
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 615 RFCRIAVEAPWFVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPLI--VAAGNYIP 442
++ R + A + R D+ +++S + AS R+ + HENPLI + Y P
Sbjct: 891 KYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYDLLINAYKP 950
Query: 441 DPAERMESSRRR 406
+ R+E S+ R
Sbjct: 951 N---RLELSKNR 959
>UniRef50_Q6FX55 Cluster: Similarities with sp|P36170 Saccharomyces
cerevisiae YKR102w FLO10; n=3; Candida glabrata|Rep:
Similarities with sp|P36170 Saccharomyces cerevisiae
YKR102w FLO10 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 715
Score = 33.9 bits (74), Expect = 4.0
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -2
Query: 412 TSPKTRHLGSSRSTNGASRYFKHRSPFSSNPSLATKGSTSKLTLRYSPLSFS 257
+S +T + SSRS + + Y +H S SS+P + ST L+ +Y+ FS
Sbjct: 347 SSSETLYYSSSRSPSSSVSYSEHTSINSSSPISSITNSTPSLSSQYTSTKFS 398
>UniRef50_Q6NIH0 Cluster: Putative DNA methylase; n=3;
Actinomycetales|Rep: Putative DNA methylase -
Corynebacterium diphtheriae
Length = 667
Score = 33.5 bits (73), Expect = 5.3
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +2
Query: 392 MTCFGRRRLLSILSAGSGM*LPAATMRGFSCRAALSKWRIDADCIYLLVDSKSRSSWRST 571
M CFG+ R+LS LS + L M+ S R + + ++ AD L+VD +R ++
Sbjct: 275 MWCFGQERILSSLSRYAPYRLAEPDMKSRSKRTGIPEEQLRADVFDLVVDETARQGDKTQ 334
Query: 572 FLTN 583
N
Sbjct: 335 AFRN 338
>UniRef50_Q2ADU4 Cluster: ATPase; n=1; Halothermothrix orenii H
168|Rep: ATPase - Halothermothrix orenii H 168
Length = 348
Score = 33.5 bits (73), Expect = 5.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 573 NVDLHDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGNYIPDPAERME 421
+V L DDL E S++ + + DK R E P+I+ ++ + ER E
Sbjct: 258 SVLLIDDLGTEKASEFTAAVLYQIIDKRYREERPIIITTNYFVDELKERFE 308
>UniRef50_Q0USD8 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 908
Score = 33.5 bits (73), Expect = 5.3
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -2
Query: 424 GKQSTSPKTRHLGSSRSTNGASRYFKHRSPFSSNPSLATKGSTSKLTLRYSPLSFSP 254
G+ T+P T + SS N ASRY + + PS ++K ST K R P SF+P
Sbjct: 786 GRADTNPNTIPITSSTLQNSASRY-TGTTAVTPTPSTSSKTSTPKSKTRTLP-SFNP 840
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 33.5 bits (73), Expect = 5.3
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -3
Query: 591 APWFVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPLIVAAGN-YIPDPAERMESS 415
APW++R D+ DL + +Q+ + ++ ++ H N L G + + R
Sbjct: 840 APWYMRTRDIERDLKVPKLGDKLQNIAQKYMERLNVHPNSLARKLGTAAVVNADPRTRVK 899
Query: 414 RRRPKHVISDPPD 376
RR +H D P+
Sbjct: 900 RRLKRHHPHDLPN 912
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 32.7 bits (71), Expect = 9.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 615 RFCRIAVEAPWFVRNVDLHDDLDLESTSKYMQSAS 511
+F R A APWFVRN LH ++ + + ++ + +
Sbjct: 1300 KFLRQAFNAPWFVRNNQLHREVKMPTMEEFFRETA 1334
>UniRef50_UPI0000D576CB Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 494
Score = 32.7 bits (71), Expect = 9.2
Identities = 14/66 (21%), Positives = 31/66 (46%)
Frame = -3
Query: 645 SISYCYVHRFRFCRIAVEAPWFVRNVDLHDDLDLESTSKYMQSASMRHFDKAARHENPLI 466
++S+ + + R APWF+RN +L DL + + +++ + ++ NP +
Sbjct: 412 NLSHILTVQNKIIRQISNAPWFIRNKNLEKDLKIPNLKDFIKKLNQDFANRTGTSNNPSL 471
Query: 465 VAAGNY 448
+Y
Sbjct: 472 TYTIDY 477
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,169,135
Number of Sequences: 1657284
Number of extensions: 12031230
Number of successful extensions: 30999
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30993
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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