Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30585
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29117-11|CAA82382.1|  307|Caenorhabditis elegans Hypothetical p...    31   0.89 
Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81101-7|CAB03200.1|  613|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z70752-6|CAA94759.1|  613|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U53340-5|AAR25650.1|  425|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U53340-4|AAA96209.2|  445|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z29117-11|CAA82382.1|  307|Caenorhabditis elegans Hypothetical
           protein C48B4.11 protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 0.89
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 680 FLLIALKLVKPRGKLFLNCSVLTYLYCIPLFVY-TYLYYRF 561
           F ++AL + K R    L+    +  YC+P+F++ T +YY F
Sbjct: 48  FAVVALYVCKSRFLQVLHFQYQSVAYCVPIFLFVTSIYYEF 88


>Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical protein
            F56A8.1 protein.
          Length = 1049

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
 Frame = +1

Query: 292  KAMKPFTTNLLQLKERTS*ITVLIITTDLSNLSSLIRFIYSNTEYSFSIPDASKAMKIPR 471
            K +  F  +L Q + R S   VL++TT +S++ S I  +   T  + S P   K  + P 
Sbjct: 803  KIINEFKFSLSQPRMRRSFQLVLLLTTVVSSVLSKIDHVKEKTGETHSDPAKLKTKEAPE 862

Query: 472  H------FTDTFARMNI 504
            H      FT++F +  I
Sbjct: 863  HIDHKKLFTESFKQRRI 879


>Z81101-7|CAB03200.1|  613|Caenorhabditis elegans Hypothetical
           protein F25B3.6 protein.
          Length = 613

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 22/77 (28%), Positives = 31/77 (40%)
 Frame = +1

Query: 262 FRLQLAPFLHKAMKPFTTNLLQLKERTS*ITVLIITTDLSNLSSLIRFIYSNTEYSFSIP 441
           FR+Q           F   LL  K   +  TV I+     ++   I   YS+ E    I 
Sbjct: 337 FRMQFVSNADFEQIEFDEWLLACKRHGNLPTVDIMDKKKQDIEKAINHKYSDKEVDLMIK 396

Query: 442 DASKAMKIPRHFTDTFA 492
           + SK   +PR+F  T A
Sbjct: 397 EKSKYQTVPRNFAMTKA 413


>Z70752-6|CAA94759.1|  613|Caenorhabditis elegans Hypothetical
           protein F25B3.6 protein.
          Length = 613

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 22/77 (28%), Positives = 31/77 (40%)
 Frame = +1

Query: 262 FRLQLAPFLHKAMKPFTTNLLQLKERTS*ITVLIITTDLSNLSSLIRFIYSNTEYSFSIP 441
           FR+Q           F   LL  K   +  TV I+     ++   I   YS+ E    I 
Sbjct: 337 FRMQFVSNADFEQIEFDEWLLACKRHGNLPTVDIMDKKKQDIEKAINHKYSDKEVDLMIK 396

Query: 442 DASKAMKIPRHFTDTFA 492
           + SK   +PR+F  T A
Sbjct: 397 EKSKYQTVPRNFAMTKA 413


>U53340-5|AAR25650.1|  425|Caenorhabditis elegans Hypothetical
           protein F02E8.2b protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 623 SVLTYLYCIPLFVYTYLYYRFIHTLSDKAFIHLSHT 516
           S +T  + +PLF   Y Y+R + TL++ +     HT
Sbjct: 251 SAITITFVLPLFFIIYCYFRILVTLNEMSNSTHVHT 286


>U53340-4|AAA96209.2|  445|Caenorhabditis elegans Hypothetical
           protein F02E8.2a protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 623 SVLTYLYCIPLFVYTYLYYRFIHTLSDKAF-IHLSHTDN 510
           S +T  + +PLF   Y Y+R + T       ++LS+T N
Sbjct: 251 SAITITFVLPLFFIIYCYFRILGTRHFLCITVNLSYTSN 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,857,900
Number of Sequences: 27780
Number of extensions: 282032
Number of successful extensions: 617
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)