Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30578
         (822 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q26018 Cluster: Serine/threonine-protein kinase; n=2; P...    37   0.70 
UniRef50_Q10L90 Cluster: Putative uncharacterized protein; n=2; ...    33   6.5  
UniRef50_A0LEZ3 Cluster: Sensor protein; n=1; Syntrophobacter fu...    33   8.6  
UniRef50_Q6LFA6 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q26018 Cluster: Serine/threonine-protein kinase; n=2;
           Plasmodium falciparum|Rep: Serine/threonine-protein
           kinase - Plasmodium falciparum
          Length = 765

 Score = 36.7 bits (81), Expect = 0.70
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 534 CLHEYLYYHSVKLFILENKTRNFNIVIFNQIYKEILLHLTILHRH 668
           CL  ++Y H +    + NK R   I+ +++I KEI +H  I H H
Sbjct: 410 CLGIHIYTHEIVAIKILNKKRLIEIINYDKIIKEIEIHKNINHNH 454


>UniRef50_Q10L90 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 555

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 99  KVGTFFLPILFGSELSPALREEQPFRLWVLKHGQLMTSSEVSAGWSHSASSLI 257
           K+  ++LP  FG+    A      F LW+L+H  LM SS++   W H A  L+
Sbjct: 271 KMTKYWLPYTFGALGLSA------FTLWLLRHSSLMGSSDID-NWLHGAKKLL 316


>UniRef50_A0LEZ3 Cluster: Sensor protein; n=1; Syntrophobacter
           fumaroxidans MPOB|Rep: Sensor protein - Syntrophobacter
           fumaroxidans (strain DSM 10017 / MPOB)
          Length = 1071

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +3

Query: 42  NSMEISLVNALWLE*HYLLKVGTFFLPILFGSELSPALREE-QPFRLWV-LKHGQLMTSS 215
           N  E  ++ A+WL   YLL V  F LPI  G  L     ++   F L + L+HG+   S 
Sbjct: 272 NHDEKHILTAMWLLPLYLLLVSMFVLPIAAGGLLDGRPPDQADTFVLRIPLQHGKPWLSL 331

Query: 216 EVSAGWSHSASSLICSTSYGTHTL 287
            V  G   +A+ +I  TS    T+
Sbjct: 332 LVFIGGFSAAAGMIMITSVTMATM 355


>UniRef50_Q6LFA6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1680

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +3

Query: 534 CLHEYLYYHSVKLFILENKTRNFNIVIFNQIYKEILLHLTILHR 665
           CL +Y+YY+      LE K +  NIV  N+ YK IL H  +LH+
Sbjct: 234 CL-KYIYYNKNDYMSLEKKIKLLNIVDQNK-YKFILDHARVLHK 275


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 901,805,262
Number of Sequences: 1657284
Number of extensions: 19303268
Number of successful extensions: 44866
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44853
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)