Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30578
         (822 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-3583|AAF57254.2|  570|Drosophila melanogaster CG5929-PA...    31   2.5  
AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.       30   3.3  
AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-P...    30   3.3  

>AE014134-3583|AAF57254.2|  570|Drosophila melanogaster CG5929-PA
           protein.
          Length = 570

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 32  YLVQLHGDILG*CSLVRIALFTESGDLL 115
           YLV+L  + L  CSL+RI  F ++GD L
Sbjct: 79  YLVRLWSEFLSDCSLIRIYDFVDNGDQL 106


>AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.
          Length = 3479

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = -3

Query: 412  ISKNYPKLNQSIQLSTWSCLPYS*CIYKNRRRGVRAALAQCDRVWVPYEVEQMRLDAECD 233
            +SK   +L   + +S +S + +    +++ R  VRA L QC   W    ++ M L A   
Sbjct: 1646 LSKQLAQLRPELTMSIFSEITHR---FQSAREDVRALLLQCLLPW----LQNMELVATSV 1698

Query: 232  QPAETSELVMS*PCFSTQ-RRKGCSSRSA 149
             PA     +M  P   T+ RR+G  S  A
Sbjct: 1699 PPATPLSYIMYFPDSGTRGRREGTGSTEA 1727


>AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-PB,
            isoform B protein.
          Length = 3479

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = -3

Query: 412  ISKNYPKLNQSIQLSTWSCLPYS*CIYKNRRRGVRAALAQCDRVWVPYEVEQMRLDAECD 233
            +SK   +L   + +S +S + +    +++ R  VRA L QC   W    ++ M L A   
Sbjct: 1646 LSKQLAQLRPELTMSIFSEITHR---FQSAREDVRALLLQCLLPW----LQNMELVATSV 1698

Query: 232  QPAETSELVMS*PCFSTQ-RRKGCSSRSA 149
             PA     +M  P   T+ RR+G  S  A
Sbjct: 1699 PPATPLSYIMYFPDSGTRGRREGTGSTEA 1727


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,837,622
Number of Sequences: 53049
Number of extensions: 882856
Number of successful extensions: 1863
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1862
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)