Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30576
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   9.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   9.0  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 648  ISFFLHIYFR*AFSCKFFYSIFYRYKAFSYIEEK 547
            I F   I+F      +FF  + +R+  FS I  K
Sbjct: 1283 IGFVFLIFFALLMVIQFFAMMIHRFGTFSQIITK 1316


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -1

Query: 648  ISFFLHIYFR*AFSCKFFYSIFYRYKAFSYIEEK 547
            I F   I+F      +FF  + +R+  FS I  K
Sbjct: 1283 IGFVFLIFFALLMVIQFFAMMIHRFGTFSQIITK 1316


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 400 VTFLVICRGGSITVTIYNLH 341
           + ++ IC  G +T+  Y LH
Sbjct: 153 LAYVWICEMGVVTLQAYTLH 172


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 400 VTFLVICRGGSITVTIYNLH 341
           + ++ IC  G +T+  Y LH
Sbjct: 153 LAYVWICEMGVVTLQAYTLH 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,129
Number of Sequences: 336
Number of extensions: 2753
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)