Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30573
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.9  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 532 TIMRYVINFHVFFLVNSVAHIW 467
           T   +VI  H+ FLV  V +IW
Sbjct: 113 TFYGFVIVAHLLFLVIFVLNIW 134


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 463 NKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWD 359
           +KP + TIK     +VA  T+ E   N H   P D
Sbjct: 263 HKPLNLTIKKMPIAIVAPFTIVEPKLNKHEDLPQD 297


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 463 NKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWD 359
           +KP + TIK     +VA  T+ E   N H   P D
Sbjct: 155 HKPLNLTIKKMPIAIVAPFTIVEPKLNKHEDLPQD 189


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 371 YMMVIMISFP*SSERHQI 424
           Y+ + + SFP  S+RHQI
Sbjct: 467 YISMKLQSFPLLSQRHQI 484


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,404
Number of Sequences: 336
Number of extensions: 3246
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)