Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30573
(672 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 66 2e-11
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 62 3e-10
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 57 1e-08
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 55 4e-08
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 55 5e-08
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 52 5e-07
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 47 1e-05
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 47 1e-05
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 46 2e-05
At1g61550.1 68414.m06934 S-locus protein kinase, putative simila... 27 8.6
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = -3
Query: 550 VVAWNLTIMRYVINFHVFFLVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHV 371
++ W + I + H+ FLVNSV HIWG + ++ + S N VA TLGEG+HN HH
Sbjct: 187 LLVWGIGIT-IAVRLHLTFLVNSVCHIWGTRAWNTSDFSKNNWWVAILTLGEGWHNNHHA 245
Query: 370 FPWDYRCTELGRTW--LNYTKLFIDLCAKVGLAYDLKVVSD 254
F + R G W L+ T I +GLA ++K+ ++
Sbjct: 246 FEFSAR---HGLEWWQLDITWCLIRFLEAIGLATNVKLPTE 283
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 62.1 bits (144), Expect = 3e-10
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Frame = -3
Query: 547 VAWNLTIMRYVINFHVFFLVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVF 368
+ W + + R V +H+ +LVNS H+WG + ++ S N VA GEG+HN HH F
Sbjct: 265 IVWGMGV-RIVWVYHITWLVNSACHVWGKQAWNTGDLSKNNWWVAALAFGEGWHNNHHAF 323
Query: 367 PWDYRCTELGRTW--LNYTKLFIDLCAKVGLAYDLKVVSD 254
+ R G W L+ T + +GLA D+K+ S+
Sbjct: 324 EFSAR---HGLEWWQLDMTWYVVKFLQAIGLATDVKLPSE 360
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = -3
Query: 517 VINFHVFFLVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWDYRCTELG 338
VI +HV +LVNS HIWG++ + S ++ T+GE +HN HH F R G
Sbjct: 203 VIGYHVTWLVNSACHIWGSRSWKTKDTSRNVWWLSLFTMGESWHNNHHAFESSAR---QG 259
Query: 337 RTW--LNYTKLFIDLCAKVGLAYDLKVVSD 254
W ++ T I L +GLA D+K+ S+
Sbjct: 260 LEWWQIDITWYLIRLFEVLGLATDVKLPSE 289
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = -3
Query: 514 INFHVFFLVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWDYRCTELGR 335
I +HV +LVNS HIWG++ ++ S ++ T+GE +HN HH F R G
Sbjct: 205 IGYHVTWLVNSACHIWGSRSWNTKDTSRNVWWLSLFTMGESWHNNHHAFESSAR---QGL 261
Query: 334 TW--LNYTKLFIDLCAKVGLAYDLKVVSD 254
W ++ T I L +G+A D+K+ S+
Sbjct: 262 EWWQIDITWYLIRLFEVLGIATDVKLPSE 290
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = -3
Query: 574 VILWDELLVVAWNLTIMRYVINFHVFFLVNSVAHIWGNKPYDKTIKSAENNLVAFATLGE 395
V LW L + W++ + I +H +L+NS HIWG++ ++ S + T+GE
Sbjct: 185 VYLWGGLPYLTWSVGVGG-AIGYHATWLINSACHIWGSRAWNTKDTSRNIWWLGPFTMGE 243
Query: 394 GYHNYHHVFPWDYRCTELGRTW--LNYTKLFIDLCAKVGLAYDLKVVSD 254
+HN HH F R G W ++ T I +GLA D+K+ +D
Sbjct: 244 SWHNNHHAFEASAR---HGLEWYQVDLTWYLIWFFQVLGLATDVKLPTD 289
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 51.6 bits (118), Expect = 5e-07
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = -3
Query: 574 VILWDELLVVAWNLTIMRYVINFHVFFLVNSVAHIWGNKPYDKTIKSAENNLVAFATLGE 395
+ LW L + W + VI +H +LVNS HI G++ + S +A T+GE
Sbjct: 185 IYLWGGLPYLTWTVGFGG-VIGYHGTWLVNSACHICGSQAWQTNDTSRNVWWLALLTMGE 243
Query: 394 GYHNYHHVFPWDYRCTELGRTW--LNYTKLFIDLCAKVGLAYDLKVVSD 254
+HN HH F R G W L+ T I +GLA ++K+ +D
Sbjct: 244 SWHNNHHAFETSAR---HGLEWYQLDITWYLIWFFQALGLATNVKLPTD 289
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = -3
Query: 547 VAWNLTIMRYVINFHVFFLVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVF 368
V W + + + HV L+NS+ HIWG + + S ++ + GE +HN HH F
Sbjct: 202 VTWGMGVGA-ALEVHVTCLINSLCHIWGTRTWKTNDTSRNVWWLSVFSFGESWHNNHHAF 260
Query: 367 PWDYRCTELGRTW--LNYTKLFIDLCAKVGLAYDLKVVSD 254
R G W ++ + + +GLA D+KV ++
Sbjct: 261 ESSAR---QGLEWWQIDISWYIVRFFEIIGLATDVKVPTE 297
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = -3
Query: 556 LLVVAWNLTIMRYVINFHVFFLVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYH 377
L + W + I + HV L+NS+ H+WG++ + S ++ + GE +HN H
Sbjct: 197 LSFLTWGMGI-GVAMEHHVTCLINSLCHVWGSRTWKTNDTSRNVWWLSVFSFGESWHNNH 255
Query: 376 HVFPWDYRCTELGRTW--LNYTKLFIDLCAKVGLAYDLKVVSD 254
H F R G W ++ + + +GLA D+K+ S+
Sbjct: 256 HAFESSAR---QGLEWWQIDISWYIVRFLEIIGLATDVKLPSE 295
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = -3
Query: 514 INFHVFFLVNSVAHIWGNKPYDKTIKSAENNLVAFATLGEGYHNYHHVFPWDYRCTELGR 335
I ++ +L+NS HIWG++ ++ S + T+GE +HN HH F R G
Sbjct: 204 IGYNGTWLINSACHIWGSRAWNTKDTSRNIWWLGPFTMGESWHNNHHAFEASAR---HGL 260
Query: 334 TW--LNYTKLFIDLCAKVGLAYDLKVVSD 254
W ++ T I +GLA D+K+ +D
Sbjct: 261 EWYQVDLTWYLICFFQALGLATDVKLPTD 289
>At1g61550.1 68414.m06934 S-locus protein kinase, putative similar
to receptor protein kinase [Ipomoea trifida]
gi|836954|gb|AAC23542; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 802
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 343 ILCTGNPKGIHDGNYDILPLK*RTPPDCFQLI*LSYHKACCPRCERHCS 489
+LC GN G H + P+ PPD ++ + + C C +CS
Sbjct: 326 LLCQGNSTGRHVNVFH--PVANIKPPDFYEFVSSGSAEECYQSCLHNCS 372
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,454,922
Number of Sequences: 28952
Number of extensions: 274455
Number of successful extensions: 638
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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