Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30566
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.2  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   7.2  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = -2

Query: 151 SWTN-QTFHKCY*SHVKRALQHQAVLNIKFSEIXD*FLFG---YFTISTFIYFF 2
           +WT+   +H    S +   L   A    ++ E+    +FG   YF ISTF YFF
Sbjct: 197 TWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQVLTIFGVSFYFFISTFFYFF 250


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
 Frame = -2

Query: 151 SWTN-QTFHKCY*SHVKRALQHQAVLNIKFSEIXD*FLFG---YFTISTFIYFF 2
           +WT+   +H    S +   L   A    ++ E+    +FG   YF ISTF YFF
Sbjct: 193 TWTSLSVYHLVEISEIHFDLCQAADDLNRYFEVQVLTIFGVSFYFFISTFFYFF 246


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 68  IFRNXRLIFVWIFYNKYIHLFF 3
           +F    L+ V I+Y  Y+HL F
Sbjct: 247 LFTVHLLLLVCIYYFYYMHLLF 268


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 230 IILKRHYAEKQIFERTKPHCNVGTIGHVDHGKTTL 334
           ++  R+Y + ++ ERT     VG  G V H   +L
Sbjct: 196 VVEGRNYRKYRVEERTSDGFIVGEYGVVSHDDGSL 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,264
Number of Sequences: 336
Number of extensions: 3414
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)