Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30565
         (457 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.44 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.59 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.59 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.4  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    23   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.6 bits (51), Expect = 0.44
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -3

Query: 209 LSCFKTHFVFIYQEHLLYFILRV*GYHPSRRKKL**CFVYQDLSLHTH-KSHKN 51
           L+C K  F+  Y+ HL Y +    G  P +  K     V + + L++H KSH N
Sbjct: 231 LTCPKCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYTCVNKSM-LNSHMKSHSN 283


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 0.59
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +1

Query: 355 KNNQDGN---ADLCGLXIHTNVFVYYRKEMRTMTLLQ 456
           KNNQDGN        +    N F+ Y KEMR   + +
Sbjct: 464 KNNQDGNNGEKKKPHIKKPLNAFMLYMKEMRAKVVAE 500


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 0.59
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +1

Query: 355 KNNQDGN---ADLCGLXIHTNVFVYYRKEMRTMTLLQ 456
           KNNQDGN        +    N F+ Y KEMR   + +
Sbjct: 356 KNNQDGNNGEKKKPHIKKPLNAFMLYMKEMRAKVVAE 392


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 228  NIDLSCLVLF*DSFCIY 178
            N+ L+C+ LF   FC+Y
Sbjct: 1126 NVLLNCVYLFLCGFCVY 1142


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 375 ITILIIFAAKH*QVVALSNKN*ID 304
           ++  +I   KH   +ALSNKN ID
Sbjct: 38  VSPFVIGYVKHFHPLALSNKNAID 61


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/28 (21%), Positives = 18/28 (64%)
 Frame = +1

Query: 262 MIFDYKTFLPFKEKINLIFVGQRHNLLM 345
           ++ DY+  +   E I+++++G +  L++
Sbjct: 864 LLMDYEHTVKINENISMLYIGYQIILMI 891


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 6/28 (21%), Positives = 18/28 (64%)
 Frame = +1

Query: 262 MIFDYKTFLPFKEKINLIFVGQRHNLLM 345
           ++ DY+  +   E I+++++G +  L++
Sbjct: 864 LLMDYEHTVKINENISMLYIGYQIILMI 891


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,746
Number of Sequences: 336
Number of extensions: 2353
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)