Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30562
         (383 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.60 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   1.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    20   9.7  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            20   9.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   9.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 338 KTSLMTASFCVWTILF-ISSILTLVSASILXATPSLV 231
           KT L T  +C + ILF +S  + LV  + L  TP+ V
Sbjct: 313 KTVLKTNKYCNFIILFYLSVFVILVYYASLDETPNPV 349


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 196 FHAPVCTFQLHLEPPP 149
           FHA   +  LH  PPP
Sbjct: 151 FHAAATSLPLHYPPPP 166


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 356 MSYTRFKTSLMTAS-FCVWTILFISSILTLVSASILXATPSLV 231
           +S T+   +L+TA  +C   I  +  +L   + SIL   PSL+
Sbjct: 400 LSKTKTFCTLVTALVYCSLAIFVLCELLIEGTTSILINVPSLI 442


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 21  FLCVFDMASQTQGIQQLLAAEKR 89
           F+CV  + S+ +G+Q +   +KR
Sbjct: 345 FVCVNTLVSEQEGLQLINEMKKR 367


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 285  FDLNFGLGIDLXRNTFPGTHVLGFKFFELPFT 190
            F+ NF L   + +   PG  V+G   +   F+
Sbjct: 2540 FNANFSLNYWIEKGADPGKIVMGMPLYGQSFS 2571


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 109 RQGKRKAKRLKQAKEEAQDEV 171
           R+    AKR + A+   +DE+
Sbjct: 143 RKNNEAAKRSRDARRAKEDEI 163


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +3

Query: 297 NGPNTEGGGHQRRLESGV*HXTRTP 371
           N P   GGG      SG  H    P
Sbjct: 27  NSPEAGGGGFWLAAASGAPHPAALP 51


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 9/25 (36%), Positives = 9/25 (36%)
 Frame = +3

Query: 297 NGPNTEGGGHQRRLESGV*HXTRTP 371
           N P   GGG      SG  H    P
Sbjct: 27  NSPEAGGGGFWLAAASGAPHPAALP 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,583
Number of Sequences: 336
Number of extensions: 1172
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)